Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,446,647 T→C T54A (ACC→GCC)  rplP ← 50S ribosomal subunit protein L16

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,446,6470TC84.9% 729.5 / 111.9 311T54A (ACC→GCC) rplP50S ribosomal subunit protein L16
Reads supporting (aligned to +/- strand):  ref base T (31/16);  new base C (130/134);  total (161/150)
Fisher's exact test for biased strand distribution p-value = 3.97e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 314 total aligned reads displayed.

TTTACCCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGTCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCTGCCGAAGCTAACATCCGTAC  >  NC_000913/3446555‑3446739
                                                                                            |                                                                                            
tttaccCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGt                                                                                              <  1:6957366/93‑1 (MQ=255)
   accCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCAt                                                                                           >  1:6534926/1‑93 (MQ=255)
    cccATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATa                                                                                          >  1:7514911/1‑93 (MQ=255)
     ccATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAg                                                                                         >  2:7127653/1‑93 (MQ=255)
     ccATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAg                                                                                         <  1:6836601/93‑1 (MQ=255)
      cATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGTCATAGc                                                                                        >  2:253530/1‑93 (MQ=255)
      cATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGc                                                                                        <  1:5260827/93‑1 (MQ=255)
       ntACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGNa                                                                                       >  2:5496033/2‑93 (MQ=255)
       aTACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCa                                                                                       >  1:5413832/1‑93 (MQ=255)
       aTACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCa                                                                                       <  2:6214794/93‑1 (MQ=255)
        tACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCac                                                                                      >  1:3149074/1‑93 (MQ=255)
        tACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCac                                                                                      <  1:4972477/93‑1 (MQ=255)
        tACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCac                                                                                      >  1:6090456/1‑93 (MQ=255)
        tACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCac                                                                                      <  2:1487841/93‑1 (MQ=255)
         aCGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCacg                                                                                     >  1:596828/1‑93 (MQ=255)
           gCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCacgac                                                                                   >  2:4743746/1‑93 (MQ=255)
           gCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCacgac                                                                                   >  2:7013735/1‑93 (MQ=255)
               tGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGtgc                                                                               >  2:2178195/1‑93 (MQ=255)
               tGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGtgc                                                                               >  1:3480462/1‑93 (MQ=255)
               tGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGtgc                                                                               >  2:3325310/1‑93 (MQ=255)
               tGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGtgc                                                                               <  1:3779834/93‑1 (MQ=255)
               tGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGtgc                                                                               >  2:4198822/1‑93 (MQ=255)
                gCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGtgct                                                                              <  1:86074/93‑1 (MQ=255)
                  cAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGtgctgc                                                                            <  2:3933802/93‑1 (MQ=255)
                  cAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGtgctgc                                                                            >  1:404710/1‑93 (MQ=255)
                   aGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTgctgct                                                                           <  2:1719363/93‑1 (MQ=255)
                   aGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTgctgct                                                                           <  2:5294850/93‑1 (MQ=255)
                   aGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTgctgct                                                                           <  2:6786571/93‑1 (MQ=255)
                    gCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCtt                                                                          >  2:7356323/1‑93 (MQ=255)
                    gCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCtt                                                                          >  1:1007248/1‑93 (MQ=255)
                       gCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGa                                                                       >  2:2098206/1‑93 (MQ=255)
                        cTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGAt                                                                      <  1:4713423/93‑1 (MQ=255)
                          tttCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCt                                                                    <  1:4157079/93‑1 (MQ=255)
                            tCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGa                                                                  <  2:2011948/93‑1 (MQ=255)
                            tCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGa                                                                  >  2:3403858/1‑93 (MQ=255)
                             cAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGAc                                                                 <  2:1573148/93‑1 (MQ=255)
                               gTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGTCATAGCACGACGTGCTGCTTCGATCTGACgg                                                               <  1:6317232/93‑1 (MQ=255)
                                tGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACggg                                                              >  2:5772622/1‑93 (MQ=255)
                                   tCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAg                                                           >  1:2104054/1‑93 (MQ=255)
                                    cGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGt                                                          <  1:19937/93‑1 (MQ=255)
                                     ggTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTc                                                         >  1:996120/1‑93 (MQ=255)
                                     ggTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTc                                                         <  2:407698/93‑1 (MQ=255)
                                      gTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCa                                                        >  1:3683213/1‑93 (MQ=255)
                                       tttGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAg                                                       <  1:4425197/93‑1 (MQ=255)
                                            ccGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAgacgac                                                  <  2:608387/93‑1 (MQ=255)
                                            ccGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAgacgac                                                  <  1:3920639/93‑1 (MQ=255)
                                              gggAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCa                                                >  2:38083/1‑93 (MQ=255)
                                              gggAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCa                                                >  2:4953333/1‑93 (MQ=255)
                                               ggAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCAc                                               >  2:3898053/1‑93 (MQ=255)
                                               ggAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCAc                                               >  1:1239091/1‑93 (MQ=255)
                                               ggAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCAc                                               >  2:5837061/1‑93 (MQ=255)
                                                gAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACg                                              <  2:4437909/93‑1 (MQ=255)
                                                  acacacGGATCCAGATCTTACCTTGACTCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGc                                            >  2:6414836/1‑93 (MQ=255)
                                                      acGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAAc                                        >  2:181004/1‑93 (MQ=255)
                                                      acGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAAc                                        <  1:2440458/93‑1 (MQ=255)
                                                      acGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAAc                                        <  1:4021505/93‑1 (MQ=255)
                                                       cGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACa                                       <  2:5450387/93‑1 (MQ=255)
                                                          aTCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCt                                    <  2:2238635/93‑1 (MQ=255)
                                                          aTCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCt                                    >  2:6327623/1‑93 (MQ=255)
                                                          aTCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCt                                    <  2:113033/93‑1 (MQ=255)
                                                           tCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCtt                                   >  1:4196465/1‑93 (MQ=255)
                                                            ccAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCttt                                  >  1:1620284/1‑93 (MQ=255)
                                                             cAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTc                                 <  1:7415245/93‑1 (MQ=255)
                                                             cAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTc                                 >  2:7265890/1‑93 (MQ=255)
                                                             cAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTc                                 >  1:5080007/1‑93 (MQ=255)
                                                                aTCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGa                              <  2:5093626/93‑1 (MQ=255)
                                                                 tCTTACCTTGACGCTTAACTGCACGGGTCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGAc                             >  1:3239458/1‑93 (MQ=255)
                                                                 tCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGAc                             <  1:1691683/93‑1 (MQ=255)
                                                                  cTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGAcc                            >  2:6868813/1‑93 (MQ=255)
                                                                    tACCTTGACGCTTAACTGCACGGGTCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGa                          <  1:2796423/93‑1 (MQ=255)
                                                                     aCCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGaa                         <  2:4604204/93‑1 (MQ=255)
                                                                      ccTTGACGCTTAACTGCACGGGTCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAg                        <  1:6276534/93‑1 (MQ=255)
                                                                      ccTTGACGCTTAACTGCACGGGTCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAg                        >  1:2606017/1‑93 (MQ=255)
                                                                      ccTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAg                        <  1:1090777/93‑1 (MQ=255)
                                                                      ccTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAg                        <  1:6691779/93‑1 (MQ=255)
                                                                       cTTGACGCTTAACTGCACGGGTCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGc                       >  1:572443/1‑93 (MQ=255)
                                                                       cTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGc                       <  1:431650/93‑1 (MQ=255)
                                                                       cTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGc                       >  2:3994530/1‑93 (MQ=255)
                                                                       cTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGc                       <  1:182432/93‑1 (MQ=255)
                                                                       cTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGc                       <  1:2975940/93‑1 (MQ=255)
                                                                        ttGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCt                      >  1:4827802/1‑93 (MQ=255)
                                                                        ttGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCt                      >  1:2688228/1‑93 (MQ=255)
                                                                          gACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCTGc                    <  2:4346567/93‑1 (MQ=255)
                                                                            cGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCTGCCg                  >  2:1697365/1‑93 (MQ=255)
                                                                            cGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCTGCCg                  <  2:2979819/93‑1 (MQ=255)
                                                                             gCTTAACTGCACGGGTCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCTGCCGa                 >  2:6624298/1‑93 (MQ=255)
                                                                              cTTAACTGCACGGGTCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCTGCCGaa                >  2:3083757/1‑93 (MQ=255)
                                                                              cTTAACTGCACGGGTCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCTGCCGaa                >  2:3549468/1‑93 (MQ=255)
                                                                              cTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCTGCCGaa                <  1:3955910/93‑1 (MQ=255)
                                                                              cTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCTGCCGaa                <  1:1424558/93‑1 (MQ=255)
                                                                                tAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGCCGGCCAGCCACCCCCGCCAAAAAGCTTCCGGACCAAGCTGCCGGAGcc             >  2:2636290/1‑92 (MQ=255)
                                                                                    tGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCTGCCGAAGCTAAc          >  2:5662821/1‑93 (MQ=255)
                                                                                    tGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCTGCCGAAGCTAAc          <  1:7037042/93‑1 (MQ=255)
                                                                                       aCGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCTGACGACCACGGCCAACAGCTTTCAGACCGAAGCTGCCGAAGCTAACATc       <  2:3024634/93‑1 (MQ=255)
                                                                                       aCGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCTGCCGAAGCTAACATc       >  1:5474434/1‑93 (MQ=255)
                                                                                        cGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCTGCCGAAGCTAACATcc      <  1:5151087/93‑1 (MQ=255)
                                                                                        cGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCTGCCGAAGCTAACATcc      <  1:5026434/93‑1 (MQ=255)
                                                                                         gggCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCTGCCGAAGCTAACATCCg     >  1:2330411/1‑93 (MQ=255)
                                                                                           gTCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCTGCCGAAGCTAACATCCGTa   <  1:3588521/93‑1 (MQ=255)
                                                                                            tCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCTGCCGAAGCTAACATCCGTAc  >  2:2876920/1‑93 (MQ=255)
                                                                                            |                                                                                            
TTTACCCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGTCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCTGCCGAAGCTAACATCCGTAC  >  NC_000913/3446555‑3446739

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: