Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,624,949 C→T E724K (GAA→AAA)  yhiH ← putative ATP‑binding component of a transport system, fragment 1

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,624,9490CT86.2% 846.9 / 83.9 296E724K (GAA→AAA) yhiHputative ATP‑binding component of a transport system, fragment 1
Reads supporting (aligned to +/- strand):  ref base C (21/20);  new base T (118/137);  total (139/157)
Fisher's exact test for biased strand distribution p-value = 6.15e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.72e-01

Only 100 of 314 total aligned reads displayed.

GCGCGATGTATGGCAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTCCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCAGGCTTTTTAC  >  NC_000913/3624859‑3625039
                                                                                          |                                                                                          
    gATGTATGGCAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGcac                                                                                      >  2:668527/1‑93 (MQ=255)
     aTGTATGGCAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGcacc                                                                                     <  1:2900370/93‑1 (MQ=255)
       gTATGGCAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGcaccac                                                                                   <  2:3804274/93‑1 (MQ=255)
       gTATGGCAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGcaccac                                                                                   >  2:4974384/1‑93 (MQ=255)
         aTGGCAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGc                                                                                 <  1:4857868/93‑1 (MQ=255)
          tGGCAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCt                                                                                >  2:2597643/1‑93 (MQ=255)
            gCAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTaa                                                                              >  1:6121104/1‑93 (MQ=255)
            gCAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTaa                                                                              <  1:2284442/93‑1 (MQ=255)
             cAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAg                                                                             <  2:5756319/93‑1 (MQ=255)
             cAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAg                                                                             <  2:1310631/93‑1 (MQ=255)
              aaCTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAgg                                                                            >  1:999648/1‑93 (MQ=255)
              aaCTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAgg                                                                            >  1:2968646/1‑93 (MQ=255)
               aCTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAggg                                                                           >  2:3226662/1‑93 (MQ=255)
               aCTGTTTACCAAGCAAAAATTCACTACGCGTGGGGGGGGTCACGTAACGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAggg                                                                           >  2:2150029/1‑93 (MQ=255)
                cTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGgc                                                                          >  2:5658472/1‑93 (MQ=255)
                cTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTCCCGCACCACGCTAAGGgc                                                                          >  2:4696512/1‑93 (MQ=255)
                  gTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGgcgc                                                                        <  2:3124014/93‑1 (MQ=255)
                   tttACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCt                                                                       <  1:2452286/93‑1 (MQ=255)
                   tttACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCt                                                                       >  1:4207316/1‑93 (MQ=255)
                    ttACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCtt                                                                      >  2:4879127/1‑93 (MQ=255)
                     tACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTa                                                                     <  1:5355617/93‑1 (MQ=255)
                       ccAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGc                                                                   >  1:4070493/1‑93 (MQ=255)
                       ccAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGc                                                                   >  2:2007280/1‑93 (MQ=255)
                        cAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCa                                                                  <  2:6827341/93‑1 (MQ=255)
                        cAAGCAAAAATTCACTACGCGTGGTGGGGGTAACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCa                                                                  >  1:7465469/1‑93 (MQ=255)
                         aaGCGAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCAt                                                                 >  1:675902/1‑93 (MQ=255)
                         aaGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCAt                                                                 >  2:5313601/1‑93 (MQ=255)
                          aGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGGACCACGCTAAGGGCGCTTAGCAtt                                                                >  1:6945347/1‑93 (MQ=255)
                          aGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTCCCGCACCACGCTAAGGGCGCTTAGCAtt                                                                <  2:3579269/93‑1 (MQ=255)
                            cAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGa                                                              <  2:6000054/93‑1 (MQ=255)
                            cAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGa                                                              <  1:6896487/93‑1 (MQ=255)
                             aaaaaTTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGAc                                                             >  2:4636361/1‑93 (MQ=255)
                             aaaaaTTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGAc                                                             <  2:3008733/93‑1 (MQ=255)
                             aaaaaTTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGAc                                                             >  2:1241125/1‑93 (MQ=255)
                              aaaaTTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACg                                                            <  2:4147697/93‑1 (MQ=255)
                              aaaaTTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTCCCGCACCACGCTAAGGGCGCTTAGCATTGACg                                                            >  1:4372464/1‑93 (MQ=255)
                               aaaTTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACgg                                                           <  1:1004788/93‑1 (MQ=255)
                                  ttCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTCCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGat                                                        >  2:1674585/1‑93 (MQ=255)
                                     aCTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGaccat                                                     >  1:3189490/1‑93 (MQ=255)
                                     aCTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGaccat                                                     <  1:3440323/93‑1 (MQ=255)
                                     aCTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGaccat                                                     >  1:5206831/1‑93 (MQ=255)
                                        aCGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGaccatcat                                                  <  1:7305409/93‑1 (MQ=255)
                                          gcgTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGAccatcatca                                                <  2:3878597/93‑1 (MQ=255)
                                          gcgTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGAccatcatca                                                <  2:740084/93‑1 (MQ=255)
                                             tggtggGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATcagca                                             >  1:3939388/1‑93 (MQ=255)
                                             tggtggGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGACCATCATcagca                                             <  1:1530203/93‑1 (MQ=255)
                                              ggtggGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGACCATCATcagcag                                            <  2:185145/93‑1 (MQ=255)
                                                tggGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGACCATCATCAGCAGaa                                          <  1:3550838/93‑1 (MQ=255)
                                                 gggggTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGACCATCATCAGCAGAAg                                         <  2:7137592/93‑1 (MQ=255)
                                                 gggggTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGACCATCATCAGCAGAAg                                         <  2:6304383/93‑1 (MQ=255)
                                                 gggggTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGACCATCATCAGCAGAAg                                         <  1:2591708/93‑1 (MQ=255)
                                                  ggggTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGACCATCATCAGCAGAAGc                                        >  1:6376236/1‑93 (MQ=255)
                                                   gggTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGACCATCATCAGCAGAAGCg                                       <  1:3903468/93‑1 (MQ=255)
                                                   gggTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGACCATCATCAGCAGAAGCg                                       <  1:5596278/93‑1 (MQ=255)
                                                    ggTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGACCATCATCAGCAGAAGCgg                                      >  1:2861637/1‑93 (MQ=255)
                                                    ggTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGACCATCATCAGCAGAAGCgg                                      <  2:4491504/93‑1 (MQ=255)
                                                     gTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGACCATCATCAGCAGAAGCggg                                     <  1:1357480/93‑1 (MQ=255)
                                                       cACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGACCATCATCAGCAGAAGCGGGAt                                   <  2:2784016/93‑1 (MQ=255)
                                                        aCGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGACCATCATCAGCAGAAGCGGGATc                                  >  2:3343908/1‑93 (MQ=255)
                                                        aCGTAAAGGTTGATAATCGACCCAAGCTCTTTTTCCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATc                                  >  1:5784159/1‑93 (MQ=255)
                                                          gTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGACCATCATCAGCAGAAGCGGGATCAc                                <  1:3752743/93‑1 (MQ=255)
                                                          gTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGACCATCATCAGCAGAAGCGGGATCAc                                <  2:4760760/93‑1 (MQ=255)
                                                          gTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGACCATCATCAGCAGAAGCGGGATCAc                                <  2:5059533/93‑1 (MQ=255)
                                                          gTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGACCATCATCAGCAGAAGCGGGATCAc                                <  2:5181466/93‑1 (MQ=255)
                                                           tAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGACCATCATCAGCAGAAGCGGGATCAcc                               >  1:4642307/1‑93 (MQ=255)
                                                           tAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGACCATCATCAGCAGAAGCGGGATCAcc                               <  1:5266512/93‑1 (MQ=255)
                                                           tAAAGGTTGATAATCGACCCAAGCTCTTTTTCCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCAcc                               >  1:5084307/1‑93 (MQ=255)
                                                             aaGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGACCATCATCAGCAGAAGCGGGATCAccgc                             <  2:2336859/93‑1 (MQ=255)
                                                             aaGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGACCATCATCAGCAGAAGCGGGATCAccgc                             <  2:6508565/93‑1 (MQ=255)
                                                             aaGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGACCATCATCAGCAGAAGCGGGATCAccgc                             <  1:7069732/93‑1 (MQ=255)
                                                             aaGGTTGATAATCGACCCAAGCTCTTTTTCCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCAccgc                             >  1:6789263/1‑93 (MQ=255)
                                                             aaGGTTGATAATCGACCCAAGCTCTTTTTCCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCAccgc                             <  1:5713485/93‑1 (MQ=255)
                                                              aGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGACCATCATCAGCAGAAGCGGGATCAccgcc                            >  1:1987963/1‑93 (MQ=255)
                                                               ggTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCAccgccg                           <  1:492329/93‑1 (MQ=255)
                                                                gTTGATAATCGACCAAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGACCATCATCAGCAGAAGCGGGATCACCGCCgg                          >  2:2276105/1‑93 (MQ=255)
                                                                 ttGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGACCATCATCAGCAGAAGCGGGATCACCGCCGGa                         >  2:77986/1‑93 (MQ=255)
                                                                  tGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGACCATCATCAGCAGAAGCGGGATCACCGCCGGaa                        <  1:4552550/93‑1 (MQ=255)
                                                                    aTAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGACCATCATCAGCAGAAGCGGGATCACCGCCGGAACa                      >  2:3914577/1‑93 (MQ=255)
                                                                     tAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGACCATCATCAGCAGAAGCGGGATCACCGCCGGAACaa                     >  1:837353/1‑93 (MQ=255)
                                                                       aTCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGACCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATc                   <  1:1685915/93‑1 (MQ=255)
                                                                        tCGACCCAAGCTCTTTTTCCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCg                  <  1:2111605/93‑1 (MQ=255)
                                                                         cGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGACCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGc                 <  1:1773413/93‑1 (MQ=255)
                                                                          gACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGACCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCt                <  2:42435/93‑1 (MQ=255)
                                                                          gACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGACCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCt                <  2:4077169/93‑1 (MQ=255)
                                                                             ccAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGACCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGc             >  1:5450848/1‑93 (MQ=255)
                                                                              cAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCa            >  1:3838911/1‑93 (MQ=255)
                                                                              cAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGACCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCa            >  2:5525217/1‑93 (MQ=255)
                                                                              cAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGACCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCa            <  2:6570408/93‑1 (MQ=255)
                                                                               aaGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGACCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCAg           >  1:6164170/1‑93 (MQ=255)
                                                                               aaGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGACCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCAg           >  2:6866155/1‑93 (MQ=255)
                                                                                  ctctTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCAGGCt        >  2:3285637/1‑93 (MQ=255)
                                                                                  ctctTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCAGGCt        >  2:4364523/1‑93 (MQ=255)
                                                                                   tctTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGACCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCAGGCtt       >  2:1713039/1‑93 (MQ=255)
                                                                                     ttttttCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGACCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCAGGCtttt     >  1:1079508/1‑93 (MQ=255)
                                                                                     ttttttCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGACCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCAGGCtttt     <  2:5829777/93‑1 (MQ=255)
                                                                                      ttttTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGACCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCAGGCttttt    <  2:3556180/93‑1 (MQ=255)
                                                                                       ttttCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGACCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCAGGCTTTTTa   <  2:7011318/93‑1 (MQ=255)
                                                                                       ttttCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGACCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCAGGCTTTTTa   <  2:4837678/93‑1 (MQ=255)
                                                                                       tttCCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCAGGCTTTTTa   <  1:3022627/93‑1 (MQ=255)
                                                                                        ttCCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCAGGCTTTTTAc  <  1:6034903/93‑1 (MQ=255)
                                                                                          |                                                                                          
GCGCGATGTATGGCAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTCCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCAGGCTTTTTAC  >  NC_000913/3624859‑3625039

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: