BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,689,910	C→T	T109T (ACG→ACA)	yhjN ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,689,910	0	C	T	84.6%	825.3 / 97.4	299	T109T (ACG→ACA)	yhjN	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (23/23); new base T (135/118); total (158/141)
Fisher's exact test for biased strand distribution p-value = 7.49e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.01e-01

Only 100 of 299 total aligned reads displayed.

CCATCAGTTCATCATTGAGATAAACCTTTAACTGCGACTGGACAGGCAGTAACGATGGCGATGGGGTGTATTCGAGGTTGAGCATCGCCTTCGTCACCACTTCATCGCTGCGCATACCAAACTCAATGCTGCCGTTCGGGTTAATGCCACGTAGCACCATGCTGCCCGGCGGCGGTGCAATTT  >  NC_000913/3689819‑3690001

ccATCAGTTCATCATTGAGATAAACCTTTAACTGCGACTGGACAGGCAGTAACGATGGCGATGGGGTGTATTCGAGGTTGAGCATCGCCTTCg                                                                                            >  2:7365168/1‑93 (MQ=255)

 cATCAGTTCATCATTGAGATAAACCTTTAACTGCGACTGGACAGGCAGTAACGATGGCGATGGGGTGTATTCGAGGTTGAGCATCGCCTTTGt                                                                                           >  2:922615/1‑93 (MQ=255)

 cATCAGTTCATCATTGAGATAAACCTTTAACTGCGACTGGACAGGCAGTAACGATGGCGATGGGGTGTATTCGAGGTTGAGCATCGCCTTTGt                                                                                           >  1:1646770/1‑93 (MQ=255)

 cATCAGTTCATCATTGAGATAAACCTTTAACTGCGACTGGACAGGCAGTAACGATGGCGATGGGGTGTATTCGAGGTTGAGCATCGCCTTTGt                                                                                           <  2:6266997/93‑1 (MQ=255)

  aTCAGTTCATCATTGAGATAAACCTTTAACTGCGACTGGACAGGCAGTAACGATGGCGATGGGGTGTATTCGAGGTTGAGCATCGCCTTCGTc                                                                                          <  2:139866/93‑1 (MQ=255)

    cAGTTCATCATTGAGATAAACCTTTAACTGCGACTGGACAGGCAGTAACGATGGCGATGGGGTGTATTCGAGGTTGAGCATCGCCTTTGTcac                                                                                        >  1:7420872/1‑93 (MQ=255)

    cAGTTCATCATTGAGATAAACCTTTAACTGCGACTGGACAGGCAGTAACGATGGCGATGGGGTGTATTCGAGGTTGAGCATCGCCTTTGTcac                                                                                        <  1:2736723/93‑1 (MQ=255)

    cAGTTCATCATTGAGATAAACCTTTAACTGCGACTGGACAGGCAGTAACGATGGCGATGGGGTGTATTCGAGGTTGAGCATCGCCTTTGTcac                                                                                        <  1:4646767/93‑1 (MQ=255)

     aGTTCATCATTGAGATAAACCTTTAACTGCGACTGGACAGGCAGTAACGATGGCGATGGGGTGTATTCGAGGTTGAGCATCGCCTTTGTcacc                                                                                       <  1:3680444/93‑1 (MQ=255)

      gTTCATCATTGAGATAAACCTTTAACTGCGACTGGACAGGCAGTAACGATGGCGATGGGGTGTATTCGAGGTTGAGCATCGCCTTCGTcacca                                                                                      >  1:4023372/1‑93 (MQ=255)

        tcatcaTTGAGATAAACCTTTAACTGCGACTGGACAGGCAGTAACGATGGCGATGGGGTGTATTCGAGGTTGAGCATCGCCTTTGTCACCACt                                                                                    >  2:1523402/1‑93 (MQ=255)

          atcatTGAGATAAACCTTTAACTGCGACTGGACAGGCAGTAACGATGGCGATGGGGTGTATTCGAGGTTGAGCATCGCCTTTGTCACCACTTc                                                                                  >  1:3766082/1‑93 (MQ=255)

          atcatTGAGATAAACCTTTAACTGCGACTGGACAGGCAGTAACGATGGCGATGGGGTGTATTCGAGGTTGAGCATCGCCTTTGTCACCACTTc                                                                                  >  2:4798995/1‑93 (MQ=255)

          atcatTGAGATAAACCTTTAACTGCGACTGGACAGGCAGTAACGATGGCGATGGGGTGTATTCGAGGTTGAGCATCGCCTTCGTCACCACTTc                                                                                  <  2:3923297/93‑1 (MQ=255)

           tcatTGAGATAAACCTTTAACTGCGACTGGACAGGCAGTAACGATGGCGATGGGGTGTATTCGAGGTTGAGCATCGCCTTCGTCACCACTTCa                                                                                 <  1:3555520/93‑1 (MQ=255)

            catTGAGATAAACCTTTAACTGCGACTGGACAGGCAGTAACGATGGCGATGGGGTGTATTCGAGGTTAAGCATCGCCTTTGTCACCACTTCAt                                                                                <  2:5396696/93‑1 (MQ=255)

              ttGAGATAAACCTTTAACTGCGACTGGACAGGCAGTAACGATGGCGATGGGGTGTATTCGAGGTTGAGCATCGCCTTTGTCACCACTTCATCg                                                                              >  2:2734379/1‑93 (MQ=255)

              ttGAGATAAACCTTTAACTGCGACTGGACAGGCAGTAACGATGGCGATGGGGTGTATTCGAGGTTGAGCATCGCCTTTGTCACCACTTCATCg                                                                              >  2:2536269/1‑93 (MQ=255)

               tGAGATAAACCTTTAACTGCGACTGGACAGGCAGTAACGATGGCGATGGGGTGTATTCGAGGTTGAGCATCGCCTTTGTCACCACTTCATCGc                                                                             >  1:1776417/1‑93 (MQ=255)

               tGAGATAAACCTTTAACTGCGACTGGACAGGCAGTAACGATGGCGATGGGGTGTATTCGAGGTTGAGCATCGCCTTTGTCACCACTTCATCGc                                                                             <  1:2002820/93‑1 (MQ=255)

                gagaTAAACCTTTAACTGCGACTGGACAGGCAGTAACGATGGCGATGGGGTGTATTCGAGGTTGAGCATCGCCTTTGTCACCACTTCATCGCt                                                                            >  1:7330922/1‑93 (MQ=255)

                gagaTAAACCTTTAACTGCGACTGGACAGGCAGTAACGATGGCGATGGGGTGTATTCGAGGTTGAGCATCGCCTTTGTCACCACTTCATCGCt                                                                            >  1:3402475/1‑93 (MQ=255)

                gagaTAAACCTTTAACTGCGACTGGACAGGCAGTAACGATGGCGATGGGGTGTATTCGAGGTTGAGCATCGCCTTCGTCACCACTTCATCGCt                                                                            <  1:6637985/93‑1 (MQ=255)

                  gaTAAACCTTTAACTGCGACTGGACAGGCAGTAACGATGGCGATGGGGTGTATTCGAGGTTGAGCATCGCCTTTGTCACCACTTCATCGCTgc                                                                          >  2:1975472/1‑93 (MQ=255)

                  gaTAAACCTTTAACTGCGACTGGACAGGCAGTAACGATGGCGATGGGGTGTATTCGAGGTTGAGCATCGCCTTTGTCACCACTTCATCGCTgc                                                                          <  2:4040395/93‑1 (MQ=255)

                   aTAAACCTTTAACTGCGACTGGACAGGCAGTAACGATGGCGATGGGGTGTATTCGAGGTTGAGCATCGCCTTTGTCACCACTTCATCGCTgcg                                                                         >  2:3555509/1‑93 (MQ=255)

                    tAAACCTTTAACTGCGACTGGACAGGCAGTAACGATGGCGATGGGGTGTATTCGAGGTTGAGCATCGCCTTTGTCACCACTTCATCGCTgcgc                                                                        >  2:4111176/1‑93 (MQ=255)

                     acaCCTTTCACTGCGCCTGGACAGGAAGTACCGATGGCGCTGGGGTCTCTTCGAGGTTGAGCCTCGCCTTCGTCACCCCTTCCTCTCTGCTCa                                                                       >  1:1873133/3‑93 (MQ=255)

                     aaaCCTTTAACTGCGACTGGACAGGCAGTAACGATGGCGATGGGGTGTATTCGAGGTTGAGCATCGCCTTTGTCACCACTTCATCGCTGCGCa                                                                       <  2:6042022/93‑1 (MQ=255)

                     aaaCCTTTAACTGCGACTGGACAGGCAGTAACGATGGCGATGGGGTGTATTCGAGGTTGAGCATCGCCTTTGTCACCACTTCATCGCTGCGCa                                                                       <  1:2982995/93‑1 (MQ=255)

                      aaCCTTTAACTGCGACTGGACAGGCAGTAACGATGGCGATGGGGTGTATTCGAGGTTGAGCATCGCCTTTGTCACCACTTCATCGCTGCGCAt                                                                      <  1:7383384/93‑1 (MQ=255)

                       aCCTTTAACTGCGACTGGACAGGCAGTAACGATGGCGATGGGGTGTATTCGAGGTTGAGCATCGCCTTTGTCACCACTTCATCGCTGCGCATa                                                                     <  1:5930521/93‑1 (MQ=255)

                        ccTTTAACTGCGACTGGACAGGCAGTAACGATGGCGATGGGGTGTATTCGAGGTTGAGCATCGCCTTTGTCACCACTTCATCGCTGCGCATAc                                                                    >  1:4454914/1‑93 (MQ=255)

                         cTTTAACTGCGACTGGACAGGCAGTAACGATGGCGATGGGGTGTATTCGAGGTTGAGCATCGCCTTTGTCACCACTTCATCGCTGCGCATAcc                                                                   >  2:7334938/1‑93 (MQ=255)

                         cTTTAACTGCGACTGGACAGGCAGTAACGATGGCGATGGGGTGTATTCGAGGTTGAGCATCGCCTTCGTCACCACTTCATCGCTGCGCATAcc                                                                   <  2:7011615/93‑1 (MQ=255)

                           ttAACTGCGACTGGACAGGCAGTAACGATGGCGATGGGGTGTATTCGAGGTTGAGCATCGCCTTTGTCACCACTTCATCGCTGCGCATACCaa                                                                 <  2:7505477/93‑1 (MQ=255)

                               cTGCGACTGGACAGGCAGTAACGATGGCGATGGGGTGTATTCGAGGTTGAGCATCGCCTTTGTCACCACTTCATCGCTGCGCATACCAAACTc                                                             <  1:6395617/93‑1 (MQ=255)

                               cTGCGACTGGACAGGCAGTAACGATGGCGATGGGGTGTATTCGAGGTTGAGCATCGCCTTTGTCACCACTTCATCGCTGCGCATACCAAACTc                                                             >  1:2483644/1‑93 (MQ=255)

                               cTGCGACTGGACAGGCAGTAACGATGGCGATGGGGTGTATTCGAGGTTGAGCATCCCCTTTGTCACCACTTCATCGCTGCGCATACCAAACTc                                                             <  1:2361966/93‑1 (MQ=255)

                                tGCGACTGGACAGGCAGTAACGATGGCGATGGGGTGTATTCGAGGTTGAGCATCGCCTTTGTCACCACTTCATCGCTGCGCATACCAAACTCa                                                            >  2:5550681/1‑93 (MQ=255)

                                tGCGACTGGACAGGCAGTAACGATGGCGATGGGGTGTATTCGAGGTTGAGCATCGCCTTTGTCACCACTTCATCGCTGCGCATACCAAACTCa                                                            >  2:2874536/1‑93 (MQ=255)

                                tGCGACTGGACAGGCAGTAACGATGGCGATGGGGTGTATTCGAGGTTGAGCATCGCCTTCGTCACCACTTCATCGCTGCGCATACCAAACTCa                                                            >  1:4836432/1‑93 (MQ=255)

                                 gCGACTGGACAGGCAGTAACGATGGCGATGGGGTGTATTCGAGGTTGAGCATCGCCTTTGTCACCACTTCATCGCTGCGCATACCAAACTCaa                                                           <  1:4318132/93‑1 (MQ=255)

                                 gCGACTGGACAGGCAGTAACGATGGCGATGGGGTGTATTCGAGGTTGAGCATCGCCTTTGTCACCACTTCATCGCTGCGCATACCAAACTCaa                                                           <  2:6724243/93‑1 (MQ=255)

                                 gCGACTGGACAGGCAGTAACGATGGCGATGGGGTGTATTCGAGGTTGAGCATCGCCTTCGTCACCACTTCATCGCTGCGCATACCAAACTCaa                                                           <  2:215329/93‑1 (MQ=255)

                                  cGACTGGACAGGCAGTAACGATGGCGATGGGGTGTATTCGAGGTTGAGCATCGCCTTTGTCACCACTTCATCGCTGCGCATACCAAACTCAAt                                                          <  2:6958857/93‑1 (MQ=255)

                                      tGGACAGGCAGTAACGATGGCGATGGGGTGTATTCGAGGTTGAGCATCGCCTTTGTCACCACTTCATCGCTGCGCATACCAAACTCAAtgctg                                                      >  1:4724055/1‑93 (MQ=255)

                                      tGGACAGGCAGTAACGATGGCGATGGGGTGTATTCGAGGTTGAGCATCGCCTTTGTCACCACTTCATCGCTGCGCATACCAAACTCAAtgctg                                                      >  2:5247595/1‑93 (MQ=255)

                                          cAGGCAGTAACGATGGCGATGGGGTGTATTCGAGGTTGAGCATCGCCTTTGTCACCACTTCATCGCTGCGCATACCAAACTCAATGCTGCCGt                                                  <  1:3424777/93‑1 (MQ=255)

                                          cAGGCAGTAACGATGGCGATGGGGTGTATTCGAGGTTGAGCATCGCCTTTGTCACCACTTCATCGCTGCGCATACCAAACTCAATGCTGCCGt                                                  <  2:2256539/93‑1 (MQ=255)

                                           aGGCAGTAACGATGGCGATGGGGTGTATTCGAGGTTGAGCATCGCCTTTGTCACCACTTCATCGCTGCGCATACCAAACTCAATGCTGCCGtt                                                 <  1:5825164/93‑1 (MQ=255)

                                           aGGCAGTAACGATGGCGATGGGGTGTATTCGAGGTTGAGCATCGCCTTTGTCACCACTTCATCGCTGCGCATACCAAACTCAATGCTGCCGtt                                                 <  1:1481540/93‑1 (MQ=255)

                                            ggCAGTAACGATGGCGATGGGGTGTATTCGAGGTTGAGCATCGCCTTTGTCACCACTTCATCGCTGCGCATACCAAACTCAATGCTGCCGTTc                                                >  2:4192135/1‑93 (MQ=255)

                                                 tAACGATGGCGATGGGGTGTATTCGAGGTTGAGCATCGCCTTTGTCACCACTTCATCGCTGCGCATACCAAACTCAATGCTGCCGTTCGGGtt                                           >  1:2679839/1‑93 (MQ=255)

                                                 tAACGATGGCGATGGGGTGTATTCGAGGTTGAGCATCGCCTTTGTCACCACTTCATCGCTGCGCATACCAAACTCAATGCTGCCGTTCGGGtt                                           >  1:6137769/1‑93 (MQ=255)

                                                 tAACGATGGCGATGGGGTGTATTCGAGGTTGAGCATCGCCTTTGTCACCACTTCATCGCTGCGCATACCAAACTCAATGCTGCCGTTCGGGtt                                           <  2:4976190/93‑1 (MQ=255)

                                                   aCGATGGCGATGGGGTGTATTCGAGGTTGAGCATCGCCTTTGTCACCACTTCATCGCTGCGCATACCAAACTCAATGCTGCCGTTCGGGTTaa                                         >  1:3918165/1‑93 (MQ=255)

                                                   aCGATGGCGATGGGGTGTATTCGAGGTTGAGCATCGCCTTTGTCACCACTTCATCGCTGCGCATACCAAACTCAATGCTGCCGTTCGGGTTaa                                         >  1:5660012/1‑93 (MQ=255)

                                                   aCGATGGCGATGGGGTGTATTCGAGGTTGAGCATCGCCTTTGTCACCACTTCATCGCTGCGCATACCAAACTCAATGCTGCCGTTCGGGTTaa                                         >  1:506689/1‑93 (MQ=255)

                                                    cgatggcgatggGGTGTATTCGAGGTTGAGCATCGCCTTTGTCACCACTTCATCGCTGCGCATACCAAACTCAATGCTGCCGTTCGGGTTAAt                                        <  2:6157252/93‑1 (MQ=255)

                                                      atggcgatggGGTGTATTCGAGGTTGAGCATCGCCTTTGTCACCACTTCATCGCTGCGCATACCAAACTCAATGCTGCCGTTCGGGTTAATGc                                      <  2:7146506/93‑1 (MQ=255)

                                                      atggcgatggGGTGTATTCGAGGTTGAGCATCGCCTTTGTCACCACTTCATCGCTGCGCATACCAAACTCAATGCTGCCGTTCGGGTTAATGc                                      <  2:312119/93‑1 (MQ=255)

                                                       tggcgatggGGTGTATTCGAGGTTGAGCATCGCCTTTGTCACCACTTCATCGCTGCGCATACCAAACTCAATGCTGCCGTTCGGGTTAATGcc                                     <  2:2045249/93‑1 (MQ=255)

                                                       tggcgatggGGTGTATTCGAGGTTGAGCATCGCCTTTGTCACCACTTCATCGCTGCGCATACCAAACTCAATGCTGCCGTTCGGGTTAATGcc                                     <  2:647063/93‑1 (MQ=255)

                                                       tggcgatggGGTGTATTCGAGGTTGAGCATCGCCTTTGTCACCACTTCATCGCTGCGCATACCAAACTCAATGCTGCCGTTCGGGTTAATGcc                                     >  1:5019318/1‑93 (MQ=255)

                                                         gcgatggGGTGTATTCGAGGTTGAGCATCGCCTTTGTCACCACTTCATCGCTGCGCATACCAAACTCAATGCTGCCGTTCGGGTTAATGCCAc                                   <  2:1183423/93‑1 (MQ=255)

                                                         gcgatggGGTGTATTCGAGGTTGAGCATCGCCTTTGTCACCACTTCATCGCTGCGCATACCAAACTCAATGCTGCCGTTCGGGTTAATGCCAc                                   <  1:2604535/93‑1 (MQ=255)

                                                           gatggGGTGTATTCGAGGTTGAGCATCGCCTTTGTCACCACTTCATCGCTGCGCATACCAAACTCAATGCTGCCGTTCGGGTTAATGCCACGt                                 >  1:2845449/1‑93 (MQ=255)

                                                              ggggTGTATTCGAGGTTGAGCATCGCCTTTGTCACCACTTCATCGCTGCGCATACCAAACTCAATGCTGCCGTTCGGGTTAATGCCACGTAGc                              <  2:1627718/93‑1 (MQ=255)

                                                              ggggTGTATTCGAGGTTGAGCATCGCCTTTGTCACCACTTCATCGCTGCGCATACCAAACTCAATGCTGCCGTTCGGGTTAATGCCACGTAGc                              <  1:2103328/93‑1 (MQ=255)

                                                              ggggTGTATTCGAGGTTGAGCATCGCCTTTGTCACCACTTCATCGCTGCGCATACCAAACTCAATGCTGCCGTTCGGGTTAATGCCACGTAGc                              <  1:1063928/93‑1 (MQ=255)

                                                               gggTGTATTCGAGGTTGAGCATCGCCTTTGTCACCACTTCATCGCTGCGCATACCAAACTCAATGCTGCCGTTCGGGTTAATGCCACGTAGCa                             >  1:5454519/1‑93 (MQ=255)

                                                                ggTGTATTCGAGGTTGAGCATCGCCTTTGTCACCACTTCATCGCTGCGCATACCAAACTCAATGCTGCCGTTCGGGTTAATGCCACGTAGCAc                            <  2:6575880/93‑1 (MQ=255)

                                                                ggTGTATTCGAGGTTGAGCATCGCCTTTGTCACCACTTCATCGCTGCGCATACCAAACTCAATGCTGCCGTTCGGGTTAATGCCACGTAGCAc                            >  1:7105187/1‑93 (MQ=255)

                                                                  tgtATTCGAGGTTGAGCATCGCCTTTGTCACCACTTCATCGCTGCGCATACCAAACTCAATGCTGCCGTTCGGGTTAATGCCACGTAGCACCa                          >  1:2821512/1‑93 (MQ=255)

                                                                     aTTCGAGGTTGAGCATCGCCTTTGTCACCACTTCATCGCTGCGCATACCAAACTCAATGCTGCCGTTCGGGTTAATGCCACGTAGCACCAtgc                       <  2:5629435/93‑1 (MQ=255)

                                                                     aTTCGAGGTTGAGCATCGCCTTTGTCACCACTTCATCGCTGCGCATACCAAACTCAATGCTGCCGTTCGGGTTAATGCCACGTAGCACCAtgc                       >  2:3610435/1‑93 (MQ=255)

                                                                     aTTCGAGGTTGAGCATCGCCTTCGTCACCACTTCATCGCTGCGCATACCAAACTCAATGCTGCCGTTCGGGTTAATGCCACGTAGCACCAtgc                       <  2:598137/93‑1 (MQ=255)

                                                                      ttCGAGGTTGAGCATCGCCTTTGTCACCACTTCATCGCTGCGCATACCAAACTCAATGCTGCCGTTCGGGTTAATGCCACGTAGCACCAtgct                      >  1:98485/1‑93 (MQ=255)

                                                                      ttCGAGGTTGAGCATCGCCTTTGTCACCACTTCATCGCTGCGCATACCAAACTCAATGCTGCCGTTCGGGTTAATGCCACGTAGCACCAtgct                      <  1:3139889/93‑1 (MQ=255)

                                                                      ttCGAGGTTGAGCATCGCCTTTGTCACCACTTCATCGCTGCGCATACCAAACTCAATGCTGCCGTTCGGGTTAATGCCACGTAGCACCAtgct                      >  1:649922/1‑93 (MQ=255)

                                                                         gAGGTTGAGCATCGCCTTTGTCACCACTTCATCGCTGCGCATACCAAACTCAATGCTGCCGTTCGGGTTAATGCCACGTAGCACCATGCTGcc                   <  2:4703245/93‑1 (MQ=255)

                                                                         gAGGTTGAGCATCGCCTTTGTCACCACTTCATCGCTGCGCATACCAAACTCAATGCTGCCGTTCGGGTTAATGCCACGTAGCACCATGCTGcc                   <  2:3704321/93‑1 (MQ=255)

                                                                         gAGGTTGAGCATCGCCTTCGTCACCACTTCATCGCTGCGCATACCAAACTCAATGCTGCCGTTCGGGTTAATGCCACGTAGCACCATGCTGcc                   <  1:853301/93‑1 (MQ=255)

                                                                           ggTTGAGCATCGCCTTTGTCACCACTTCATCGCTGCGCATACCAAACTCAATGCTGCCGTTCGGGTTAATGCCACGTAGCACCATGCTGCCcg                 >  1:7300707/1‑93 (MQ=255)

                                                                            gTTGAGCATCGCCTTTGTCACCACTTCATCGCTGCGCATACCAAACTCAATGCTGCCGTTCGGGTTAATGCCACGTAGCACCATGCTGCCcgg                >  2:5507487/1‑93 (MQ=255)

                                                                             ttGAGCATCGCCTTTGTCACCACTTCATCGCTGCGCATACCAAACTCAATGCTGCCGTTCGGGTTAATGCCACGTAGCACCATGCTGCCcggc               <  2:4621036/93‑1 (MQ=255)

                                                                              tGAGCATCGCCTTTGTCACCACTTCATCGCTGCGCATACCAAACTCAATGCTGCCGTTCGGGTTAATGCCACGTAGCACCATGCTGCCcggcg              >  2:4527895/1‑93 (MQ=255)

                                                                                aGCATCGCCTTTGTCACCACTTCATCGCTGCGCATACCAAACTCAATGCTGCCGTTCGGGTTAATGCCACGTAGCACCATGCTGCCcggcggc            >  2:5710306/1‑93 (MQ=255)

                                                                                  cATCGCCTTTGTCACCACTTCATCGCTGCGCATACCAAACTCAATGCTGCCGTTCGGGTTAATGCCACGTAGCACCATGCTGCCcggcggcgg          <  2:258692/93‑1 (MQ=255)

                                                                                  cATCGCCTTTGTCACCACTTCATCGCTGCGCATACCAAACTCAATGCTGCCGTTCGGGTTAATGCCACGTAGCACCATGCTGCCcggcggcgg          <  1:5263926/93‑1 (MQ=255)

                                                                                   aTCGCCTTTGTCACCACTTCATCGCTGCGCATACCAAACTCAATGCTGCCGTTCGGGTTAATGCCACGTAGCACCATGCTGCCCGGCGGCGGt         <  2:1674578/93‑1 (MQ=255)

                                                                                    tCGCCTTTGTCACCACTTCATCGCTGCGCATACCAAACTCAATGCTGCCGTTCGGGTTAATGCCACGTAGCACCATGCTGCCCGGCGGCGGTg        >  1:7518240/1‑93 (MQ=255)

                                                                                     cGCCTTCGTCACCACTTCATCGCTGCGCATACCAAACTCAATGCTGCCGTTCGGGTTAATGCCACGTAGCACCATGCTGCCCGGCGGCGGTGc       <  2:1315316/93‑1 (MQ=255)

                                                                                        cTTTGTCACCACTTCATCGCTGCGCATACCAAACTCAATGCTGCCGTTCGGGTTAATGCCACGTAGCACCATGCTGCCCGGCGGCGGTGCAAt    >  2:1809992/1‑93 (MQ=255)

                                                                                        cTTTGTCACCACTTCATCGCTGCGCATACCAAACTCAATGCTGCCGTTCGGGTTAATGCCACGTAGCACCATGCTGCCCGGCGGCGGTGCAAt    >  1:6762212/1‑93 (MQ=255)

                                                                                        cTTTGTCACCACTTCATCGCTGCGCATACCAAACTCAATGCTGCCGTTCGGGTTAATGCCACGTAGCACCATGCTGCCCGGCGGCGGTGCAAt    >  2:7056596/1‑93 (MQ=255)

                                                                                         ttCGTCACCACTTCATCGCTGCGCATACCAAACTCAATGCTGCCGTTCGGGTTAATGCCACGTAGCACCATGCTGCCCGGCGGCGGTGCAAtt   >  1:3080083/1‑93 (MQ=255)

                                                                                         ttCGTCACCACTTCATCGCTGCGCATACCAAACTCAATGCTGCCGTTCGGGTTAATGCCACGTAGCACCATGCTGCCCGGCGGCGGTGCAAtt   >  1:1171129/1‑93 (MQ=255)

                                                                                          tCGTCACCACTTCATCGCTGCGCATACCAAACTCAATGCTGCCGTTCGGGTTAATGCCACGTAGCACCATGCTGCCCGGCGGCGGTGCAAttt  >  1:6341266/1‑93 (MQ=255)

CCATCAGTTCATCATTGAGATAAACCTTTAACTGCGACTGGACAGGCAGTAACGATGGCGATGGGGTGTATTCGAGGTTGAGCATCGCCTTCGTCACCACTTCATCGCTGCGCATACCAAACTCAATGCTGCCGTTCGGGTTAATGCCACGTAGCACCATGCTGCCCGGCGGCGGTGCAATTT  >  NC_000913/3689819‑3690001

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`