| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 418,805 | A→G | intergenic (+397/‑10) | phoR → / → brnQ | positive and negative sensor protein for pho regulon/branched chain amino acid transport system II carrier protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 418,805 | 0 | A | G | 90.8% | 720.9 / 54.2 | 262 | intergenic (+397/‑10) | phoR/brnQ | positive and negative sensor protein for pho regulon/branched chain amino acid transport system II carrier protein |
| Reads supporting (aligned to +/- strand): ref base A (11/13); new base G (105/133); total (116/146) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.20e-01 | |||||||||||
Only 100 of 262 total aligned reads displayed.
TATTTCCCGCTAAAATTGTTTAAATATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACAT > NC_000913/418715‑418894 | aTTTCCCGCTAAAATTGTTTAAATATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTa < 1:2959042/93‑1 (MQ=255) tttCCCGCTAAAATTGTTTAAATATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTAt > 1:1028426/1‑93 (MQ=255) tCCCGCTAAAATTGTTTAAATATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGa < 1:27996/93‑1 (MQ=255) cccGCTAAAATTGTTTAAATATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGAt < 2:4470757/93‑1 (MQ=255) ccGCTAAAATTGTTTAAATATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGAtt < 1:1621253/93‑1 (MQ=255) cGCTAAAATTGTTTAAATATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGAttt > 1:6440700/1‑93 (MQ=255) gCTAAAATTGTTTAAATATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTa < 2:6021884/93‑1 (MQ=255) gCTAAAATTGTTTAAATATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTa < 2:1729661/93‑1 (MQ=255) cTAAAATTGTTTAAATATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACGGGCGGTATGATTTAt < 2:5512343/93‑1 (MQ=255) aaaaTTGTTTAAATATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGa < 2:208622/93‑1 (MQ=255) aaaaTTGTTTAAATATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGa > 2:6379394/1‑93 (MQ=255) aaaaTTGTTTAAATATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGa > 1:3370627/1‑93 (MQ=255) aaaaTTGTTTAAATATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGa > 2:7033487/1‑93 (MQ=255) aaTTGTTTAAATATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGAcc < 2:5418707/93‑1 (MQ=255) aaTTGTTTAAATATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGAcc > 2:1514018/1‑93 (MQ=255) ttGTTTAAATATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCa < 1:5778460/93‑1 (MQ=255) tGTTTAAATATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCAt > 2:64987/1‑93 (MQ=255) tGTTTAAATATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCAt > 1:764011/1‑93 (MQ=255) gTTTAAATATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATc > 1:5905344/1‑93 (MQ=255) gTTTAAATATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATc > 1:5658238/1‑93 (MQ=255) gTTTAAATATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCAGTATGATTTATGACCCATc < 1:5075544/93‑1 (MQ=255) tttAAATATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCa > 2:4297235/1‑93 (MQ=255) tttAAATATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCa > 1:5370641/1‑93 (MQ=255) aaaTATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAAtt > 1:2599061/1‑93 (MQ=255) aaaTATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAAtt < 1:2467837/93‑1 (MQ=255) aaaTATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAAtt > 1:5528325/1‑93 (MQ=255) aaTATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTa > 1:5550417/1‑93 (MQ=255) atatACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTaa < 2:4940525/93‑1 (MQ=255) atatACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTaa > 2:6591712/1‑93 (MQ=255) ataCCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGa > 1:5951163/1‑93 (MQ=255) taCCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGAt > 2:3034664/1‑93 (MQ=255) taCCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGAt > 2:5234507/1‑93 (MQ=255) aCCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATc < 2:6272587/93‑1 (MQ=255) aCCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATc < 1:4985589/93‑1 (MQ=255) ccGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATcg < 1:6519852/93‑1 (MQ=255) ccGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGATcg > 2:3536956/1‑93 (MQ=255) cGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATcgc > 2:5085766/1‑93 (MQ=255) cGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATcgc > 2:3412426/1‑93 (MQ=255) cGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATcgc < 2:912368/93‑1 (MQ=255) gCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATcgcg > 1:4228783/1‑93 (MQ=255) gCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATcgcg > 2:1022284/1‑93 (MQ=255) gCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGATcgcg > 1:7470370/1‑93 (MQ=255) cTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATcgcgc < 1:3867573/93‑1 (MQ=255) gTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGa < 2:573898/93‑1 (MQ=255) gTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGa < 2:5890584/93‑1 (MQ=255) atcatcCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGata > 1:3212743/1‑93 (MQ=255) tcatcCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGatat < 1:6531401/93‑1 (MQ=255) catcCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATatc < 2:2661394/93‑1 (MQ=255) atcCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATatca < 2:2741912/93‑1 (MQ=255) atcCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATatca < 2:1370818/93‑1 (MQ=255) ccccAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTCTGATTTATGACCCATCAATTAAGATCGCGCGATatcatc < 1:6217591/93‑1 (MQ=255) ccAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGc > 2:3891670/1‑93 (MQ=255) ccAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGc < 2:1625439/93‑1 (MQ=255) cAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGct > 2:3843433/1‑93 (MQ=255) aGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGcac > 1:837397/1‑91 (MQ=255) gggATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGctct < 2:3628387/93‑1 (MQ=255) gggATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGctct < 1:4057864/93‑1 (MQ=255) gggATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGctct < 1:3505119/93‑1 (MQ=255) ggATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTg > 1:3742779/1‑93 (MQ=255) ggATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTg < 1:3070005/93‑1 (MQ=255) ggATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTg < 1:1648071/93‑1 (MQ=255) gATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTgg < 2:1455269/93‑1 (MQ=255) ttGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGc < 1:2725981/93‑1 (MQ=255) cacaAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTa < 2:1941536/93‑1 (MQ=255) cacaAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTa < 2:1740958/93‑1 (MQ=255) cacaAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTa < 2:4075237/93‑1 (MQ=255) cacaAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTa < 1:7267088/93‑1 (MQ=255) acaAAAATTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTAt < 2:7270641/93‑1 (MQ=255) aaaaaTTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGa < 1:3963797/93‑1 (MQ=255) aaaaaTTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGa < 2:2375352/93‑1 (MQ=255) aaaaaTTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGa < 1:6287908/93‑1 (MQ=255) aaaaaTTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGa > 2:1862768/1‑93 (MQ=255) aaaaaTTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGa < 1:4295856/93‑1 (MQ=255) aaaTTTAACGTTACAACACCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACa < 1:5267912/93‑1 (MQ=255) aaTTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACAt < 2:641739/93‑1 (MQ=255) aTTTAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACAtt < 2:4344582/93‑1 (MQ=255) tAACGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGc > 1:7187206/1‑93 (MQ=255) aaCGTNACAACACCACATCCACAGGCGGTATGATTTATGACCCNNNNATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCg < 2:3722193/93‑1 (MQ=255) aCGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCgt < 2:5129961/93‑1 (MQ=255) cGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCgtt < 2:2935827/93‑1 (MQ=255) cGTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCgtt < 1:4779119/93‑1 (MQ=255) gTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCgttg < 2:1194902/93‑1 (MQ=255) gTTACAACACCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCgttg > 2:2563888/1‑93 (MQ=255) acaacaCCACATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTtc > 1:6783658/1‑93 (MQ=255) accacATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCgg > 2:4206388/1‑93 (MQ=255) accacATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCgg > 2:2226822/1‑93 (MQ=255) accacATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCgg < 1:6950335/93‑1 (MQ=255) accacATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCgg < 1:2116478/93‑1 (MQ=255) ccacATCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGgc < 1:1940381/93‑1 (MQ=255) cacaTCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGgcg > 2:5809187/1‑93 (MQ=255) acaTCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGgcgc < 2:1807254/93‑1 (MQ=255) caTCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCa < 1:4606668/93‑1 (MQ=255) caTCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCa > 2:776970/1‑93 (MQ=255) caTCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCa < 1:67018/93‑1 (MQ=255) aTCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAg < 1:4388469/93‑1 (MQ=255) tCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAgg > 2:6757390/1‑93 (MQ=255) tCCACAGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAgg > 1:1320799/1‑93 (MQ=255) cacaGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTa < 1:2280184/93‑1 (MQ=255) acaGGCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTaa > 2:4499291/1‑93 (MQ=255) ggCGGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACat > 1:2891720/1‑93 (MQ=255) | TATTTCCCGCTAAAATTGTTTAAATATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACAT > NC_000913/418715‑418894 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |