Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,751,162 T→C S190G (AGC→GGC)  yiaV ← putative membrane protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,751,1620TC81.9% 636.4 / 143.1 304S190G (AGC→GGC) yiaVputative membrane protein
Reads supporting (aligned to +/- strand):  ref base T (30/25);  new base C (126/123);  total (156/148)
Fisher's exact test for biased strand distribution p-value = 6.56e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.98e-01

Only 100 of 307 total aligned reads displayed.

TCTGCTCAAGGTTATATTTTGCTTCCGCGAGCTGTGCTTTCAGGCTGGCGATTTGAGAATGTTCACCCAACACCAGGCTATCCAGCTGGCTCTGGATCTGTTTTTGTTCCGCCGCCGATGACTTCACGGAGGCTTCCTGCGCCAGATAATTTTGCCGCGCCACATCGATATCGCGTTCTG  >  NC_000913/3751072‑3751251
                                                                                          |                                                                                         
tCTGCTCAAGGTTATATTTTGCTTCCGCGAGCTGTGCTTTCAGGCTGGCGATTTGAGAATGTTCACCCAACACCAGGCTATCCAGCTGGccct                                                                                         >  2:559542/1‑93 (MQ=255)
 cTGCTCAAGGTTATATTTTGCTTCCGCGAGCTGTGCTTTCAGGCTGGCGATTTGAGAATGTTCACCCAACACCAGGCTATCCAGCTGGCCCTg                                                                                        <  2:1785971/93‑1 (MQ=255)
  tGCTCAAGGTTATATTTTGCTTCCGCGAGCTGTGCTTTCAGGCTGGCGATTTGAGAATGTTCACCCAACACCAGGCTATCCAGCTGGCCCTgg                                                                                       >  2:3518456/1‑93 (MQ=255)
  tGCTCAAGGTTATATTTTGCTTCCGCGAGCTGTGCTTTCAGGCTGGCGATTTGAGAATGTTCACCCAACACCAGGCTATCCAGCTGGCCCTgg                                                                                       <  1:6135137/93‑1 (MQ=255)
   gCTCAAGGTTATATTTTGCTTCCGCGAGCTGTGCTTTCAGGCTGGCGATTTGAGAATGTTCACCCAACACCAGGCTATCCAGCTGGCCCTGGa                                                                                      <  1:5000062/93‑1 (MQ=255)
     tCAAGGTTATATTTTGCTTCCGCGAGCTGTGCTTTCAGGCTGGCGATTTGAGAATGTTCACCCAACACCAGGCTATCCAGCTGGCCCTGGATc                                                                                    <  1:1140422/93‑1 (MQ=255)
     tCAAGGTTATATTTTGCTTCCGCGAGCTGTGCTTTCAGGCTGGCGATTTGAGAATGTTCACCCAACACCAGGCTATCCAGCTGGCCCTGGATc                                                                                    <  1:3985249/93‑1 (MQ=255)
      cAAGGTTATATTTTGCTTCCGCGAGCTGTGCTTTCAGGCTGGCGATTTGAGAATGTTCACCCAACACCAGGCTATCCAGCTGGCTCTGGATCt                                                                                   >  1:881663/1‑93 (MQ=255)
      cAAGGTTATATTTTGCTTCCGCGAGCTGTGCTTTCAGGCTGGCGATTTGAGAATGTTCACCCAACACCAGGCTATCCAGCTGGCCCTGGATCt                                                                                   >  2:7240464/1‑93 (MQ=255)
         ggTTATATTTTGCTTCCGCGAGCTGTGCTTTCAGGCTGGCGATTTGAGAATGTTCACCCAACACCAGGCTATCCAGCTGGCCCTGGATCTGtt                                                                                >  2:551327/1‑93 (MQ=255)
           ttATATTTTGCTTCCGCGAGCTGTGCTTTCAGGCTGGCGATTTGAGAATGTTCACCCAACACCAGGCTATCCAGCTGGCCCTGGATCTGtttt                                                                              >  2:1595192/1‑93 (MQ=255)
             atatTTTGCTTCCGCGAGCTGTGCTTTCAGGCTGGCGATTTGAGAATGTTCACCCAACACCAGGCTATCCAGCTGGCCCTGGATCTGTTTTTg                                                                            >  2:83012/1‑93 (MQ=255)
             atatTTTGCTTCCGCGAGCTGTGCTTTCAGGCTGGCGATTTGAGAATGTTCACCCAACACCAGGCTATCCAGCTGGCCCTGGATCTGTTTTTg                                                                            >  2:6149214/1‑93 (MQ=255)
              tatTTTGCTTCCGCGAGCTGTGCTTTCAGGCTGGCGATTTGAGAATGTTCACCCAACACCAGGCTATCCAGCTGGCCCTGGATCTGTTTTTGt                                                                           >  1:6730224/1‑93 (MQ=255)
              tatTTTGCTTCCGCGAGCTGTGCTTTCAGGCTGGCGATTTGAGAATGTTCACCCAACACCAGGCTATCCAGCTGGCCCTGGATCTGTTTTTGt                                                                           <  1:6542325/93‑1 (MQ=255)
               atTTTGCTTCCGCGAGCTGTGCTTTCAGGCTGGCGATTTGAGAATGTTCACCCAACACCAGGCTATCCAGCTGGCCCTGGATCTGTTTTTGtt                                                                          >  2:6960038/1‑93 (MQ=255)
                ttttGCTTCCGCGAGCTGTGCTTTCAGGCTGGCGATTTGAGAATGTTCACCCAACACCAGGCTATCCAGCTGGCTCTGGATCTGTTTTTGTTc                                                                         <  2:3798887/93‑1 (MQ=255)
                ttttGCTTCCGCGAGCTGTGCTTTCAGGCTGGCGATTTGAGAATGTTCACCCAACACCAGGCTATCCAGCTGGCCCTGGATCTGTTTTTGTTc                                                                         <  1:2584424/93‑1 (MQ=255)
                ttttGCTTCCGCGAGCTGTGCTTTCAGGCTGGCGATTTGAGAATGTTCACCCAACACCAGGCTATCCAGCTGGCCCTGGATCTGTTTTTGTTc                                                                         >  2:4574542/1‑93 (MQ=255)
                ttttGCTTCCGCGAGCTGTGCTTTCAGGCTGGCGATTTGAGAATGTTCACCCAACACCAGGCTATCCAGCTGGCCCTGGATCTGTTTTTGTTc                                                                         <  2:1000915/93‑1 (MQ=255)
                ttttGCTTCCGCGAGCTGTGCTTTCAGGCTGGCGATTTGAGAATGTTCACCCAACACCAGGCTATCCAGCTGGCCCTGGATCTGTTTTTGTTc                                                                         <  1:7487845/93‑1 (MQ=255)
                ttttGCTTCCGCGAGCTGTGCTTTCAGGCTGGCGATTTGAGAATGTTCACCCAACACCAGGCTATCCAGCTGGCCCTGGATCTGTTTTTGTTc                                                                         <  1:7423798/93‑1 (MQ=255)
                ttttGCTTCCGCGAGCTGTGCTTTCAGGCTGGCGATTTGAGAATGTTCACCCAACACCAGGCTATCCAGCTGGCCCTGGATCTGTTTTTGTTc                                                                         <  1:6023481/93‑1 (MQ=255)
                ttttGCTTCCGCGAGCTGTGCTTTCAGGCTGGCGATTTGAGAATGTTCACCCAACACCAGGCTATCCAGCTGGCCCTGGATCTGTTTTTGTTc                                                                         >  1:4363986/1‑93 (MQ=255)
                 tttGCTTCCGCGAGCTGTGCTTTCAGGCTGGCGATTTGAGAATGTTCACCCAACACCAGGCTATCCAGCTGGCCCTGGATCTGTTTTTGTTcc                                                                        <  1:2380737/93‑1 (MQ=255)
                    gCTTCCGCGAGCTGTGCTTTCAGGCTGGCGATTTGAGAATGTTCACCCAACACCAGGCTATCCAGCTGGCCCTGGATCTGTTTTTGTTccgcc                                                                     >  1:325359/1‑93 (MQ=255)
                      ttCCGCGAGCTGTGCTTTCAGGCTGGCGATTTGAGAATGTTCACCCAACACCAGGCTATCCAGCTGGCCCTGGATCTGTTTTTGTTccgccgc                                                                   >  1:1906977/1‑93 (MQ=255)
                       tCCGCGAGCTGTGCTTTCAGGCTGGCGATTTGAGAATGTTCACCCAACACCAGGCTATCCAGCTGGCTCTGGATCTGTTTTTGTTccgccgcc                                                                  <  1:7350429/93‑1 (MQ=255)
                       tCCGCGAGCTGTGCTTTCAGGCTGGCGATTTGAGAATGTTCACCCAACACCAGGCTATCCAGCTGGCCCTGGATCTGTTTTTGTTccgccgcc                                                                  >  2:6431628/1‑93 (MQ=255)
                       tCCGCGAGCTGTGCTTTCAGGCTGGCGATTTGAGAATGTTCACCCAACACCAGGCTATCCAGCTGGCCCTGGATCTGTTTTTGTTccgccgcc                                                                  <  1:5762697/93‑1 (MQ=255)
                         cgcgAGCTGTGCTTTCAGGCTGGCGATTTGAGAATGTTCACCCAACACCAGGCTATCCAGCTGGCCCTGGATCTGTTTTTGTTCCGCCGCCGa                                                                <  1:4502992/93‑1 (MQ=255)
                           cgAGCTGTGCTTTCAGGCTGGCGATTTGAGAATGTTCACCCAACACCAGGCTATCCAGCTGGCTCTGGATCTGTTTTTGTTCCGCCGCCGATg                                                              >  2:3456428/1‑93 (MQ=255)
                           cgAGCTGTGCTTTCAGGCTGGCGATTTGAGAATGTTCACCCAACACCAGGCTATCCAGCTGGCCCTGGATCTGTTTTTGTTCCGCCGCCGATg                                                              <  2:3888286/93‑1 (MQ=255)
                            gAGCTGTGCTTTCAGGCTGGCGATTTGAGAATGTTCACCCAACACCAGGCTATCCAGCTGGCCCTGGATCTGTTTTTGTTCCGCCGCCGATGa                                                             <  1:3580984/93‑1 (MQ=255)
                            gAGCTGTGCTTTCAGGCTGGCGATTTGAGAATGTTCACCCAACACCAGGCTATCCAGCTGGCCCTGGATCTGTTTTTGTTCCGCCGCCGATGa                                                             >  2:662589/1‑93 (MQ=255)
                             aGCTGTGCTTTCAGGCTGGCGATTTGAGAATGTTCACCCAACACCAGGCTATCCAGCTGGCCCTGGATCTGTTTTTGTTCCGCCGCCGATGAc                                                            <  2:6122094/93‑1 (MQ=255)
                             aGCTGTGCTTTCAGGCTGGCGATTTGAGAATGTTCACCCAACACCAGGCTATCCAGCTGGCCCTGGATCTGTTTTTGTTCCGCCGCCGATGAc                                                            >  1:6713127/1‑93 (MQ=255)
                              gCTGTGCTTTCAGGCTGGCGATTTGAGAATGTTCACCCAACACCAGGCTATCCAGCTGGCCCTGGATCTGTTTTTGTTCCGCCGCCGATGACt                                                           >  2:6857415/1‑93 (MQ=255)
                              gCTGTGCTTTCAGGCTGGCGATTTGAGAATGTTCACCCAACACCAGGCTATCCAGCTGGCCCTGGATCTGTTTTTGTTCCGCCGCCGATGACt                                                           >  2:1207567/1‑93 (MQ=255)
                               cTGTGCTTTCAGGCTGGCGATTTGAGAATGTTCACCCAACACCAGGCTATCCAGCTGGCCCTGGATCTGTTTTTGTTCCGCCGCCGATGACtt                                                          <  2:4236772/93‑1 (MQ=255)
                                tgtgCTTTCAGGCTGGCGATTTGAGAATGTTCACCCAACACCAGGCTATCCAGCTGGCCCTGGATCTGTTTTTGTTCCGCCGCCGATGACTTc                                                         >  1:3156949/1‑93 (MQ=255)
                                 gtgCTTTCAGGCTGGCGATTTGAGAATGTTCACCCAACACCAGGCTATCCAGCTGGCCCTGGATCTGTTTTTGTTCCGCCGCCGATGACTTCa                                                        <  2:5191840/93‑1 (MQ=255)
                                  tgCTTTCAGGCTGGCGATTTGAGAATGTTCACCCAACACCAGGCTATCCAGCTGGCCCTGGATCTGTTTTTGTTCCGCCGCCGATGACTTCAc                                                       >  1:3130104/1‑93 (MQ=255)
                                  tgCTTTCAGGCTGGCGATTTGAGAATGTTCACCCAACACCAGGCTATCCAGCTGGCCCTGGATCTGTTTTTGTTCCGCCGCCGATGACTTCAc                                                       <  2:6814819/93‑1 (MQ=255)
                                  tgCTTTCAGGCTGGCGATTTGAGAATGTTCACCCAACACCAGGCTATCCAGCTGGCCCTGGATCTGTTTTTGTTCCGCCGCCGATGACTTCAc                                                       <  1:2102657/93‑1 (MQ=255)
                                   gCTTTCAGGCTGGCGATTTGAGAATGTTCACCCAACACCAGGCTATCCAGCTGGCTCTGGATCTGTTTTTGTTCCGCCGCCGATGACTTCACg                                                      <  2:2385436/93‑1 (MQ=255)
                                    cTTTCAGGCTGGCGATTTGAGAATGTTCACCCAACACCAGGCTATCCAGCTGGCCCTGGATCTGTTTTTGTTCCGCCGCCGATGACTTCACgg                                                     <  2:1937409/93‑1 (MQ=255)
                                     tttCAGGCTGGCGATTTGAGAATGTTCACCCAACACCAGGCTATCCAGCTGGCCCTGGATCTGTTTTTGTTCCGCCGCCGATGACTTCACGGa                                                    >  1:2492793/1‑93 (MQ=255)
                                     tttCAGGCTGGCGATTTGAGAATGTTCACCCAACACCAGGCTATCCAGCTGGCCCTGGATCTGTTTTTGTTCCGCCGCCGATGACTTCACGGa                                                    <  2:4089610/93‑1 (MQ=255)
                                      ttCAGGCTGGCGATTTGAGAATGTTCACCCAACACCAGGCTATCCAGCTGGCCCTGGATCTGTTTTTGTTCCGCCGCCGATGACTTCACGGAg                                                   >  2:5922415/1‑93 (MQ=255)
                                         aGGCTGGCGATTTGAGAATGTTCACCCAACACCAGGCTATCCAGCTGGCCCTGGATCTGTTTTTGTTCCGCCGCCGATGACTTCACGGAGGCt                                                >  2:1903001/1‑93 (MQ=255)
                                            cTGGCGATTTGAGAATGTTCACCCAACACCAGGCTATCCAGCTGGCCCTGGATCTGTTTTTGTTCCGCCGCCGATGACTTCACGGAGGCTTcc                                             >  2:5744774/1‑93 (MQ=255)
                                             tGGCGATTTGAGAATGTTCACCCAACACCAGGCTATCCAGCTGGCCCTGGATCTGTTTTTGTTCCGCCGCCGATGACTTCACGGAGGCTTCCt                                            >  1:5404799/1‑93 (MQ=255)
                                             tGGCGATTTGAGAATGTTCACCCAACACCAGGCTATCCAGCTGGCCCTGGATCTGTTTTTGTTCCGCCGCCGATGACTTCACGGAGGCTTCCt                                            >  2:5066807/1‑93 (MQ=255)
                                              ggCGATTTGAGAATGTTCACCCAACACCAGGCTATCCAGCTGGCTCTGGATCTGTTTTTGTTCCGCCGCCGATGACTTCACGGAGGCTTCCTg                                           >  2:3318820/1‑93 (MQ=255)
                                              ggCGATTTGAGAATGTTCACCCAACACCAGGCTATCCAGCTGGCCCTGGATCTGTTTTTGTTCCGCCGCCGATGACTTCACGGAGGCTTCCTg                                           <  1:3479524/93‑1 (MQ=255)
                                              ggCGATTTGAGAATGTTCACCCAACACCAGGCTATCCAGCTGGCCCTGGATCTGTTTTTGTTCCGCCGCCGATGACTTCACGGAGGCTTCCTg                                           >  1:7168687/1‑93 (MQ=255)
                                              ggCGATTTGAGAATGTTCACCCAACACCAGGCTATCCAGCTGGCCCTGGATCTGTTTTTGTTCCGCCGCCGATGACTTCACGGAGGCTTCCTg                                           >  1:1078889/1‑93 (MQ=255)
                                              ggCGATTTGAGAATGTTCACCCAACACCAGGCTATCCAGCTGGCCCTGGATCTGTTTTTGTTCCGCCGCCGATGACTTCACGGAGGCTTCCTg                                           <  1:1323178/93‑1 (MQ=255)
                                                cGATTTGAGAATGTTCACCCAACACCAGGCTATCCAGCTGGCCCTGGATCTGTTTTTGTTCCGCCGCCGATGACTTCACGGAGGCTTCCTgcg                                         >  2:3769673/1‑93 (MQ=255)
                                                 gATTTGAGAATGTTCACCCAACACCAGGCTATCCAGCTGGCCCTGGATCTGTTTTTGTTCCGCCGCCGATGACTTCACGGAGGCTTCCTgcgc                                        >  2:6596918/1‑93 (MQ=255)
                                                   tttGAGAATGTTCACCCAACACCAGGCTATCCAGCTGGCCCTGGATCTGTTTTTGTTCCGCCGCCGATGACTTCACGGAGGCTTCCTGCGCCa                                      >  1:5606187/1‑93 (MQ=255)
                                                   tttGAGAATGTTCACCCAACACCAGGCTATCCAGCTGGCCCTGGATCTGTTTTTGTTCCGCCGCCGATGACTTCACGGAGGCTTCCTGCGCCa                                      <  1:7127793/93‑1 (MQ=255)
                                                    ttGAGAATGTTCACCCAACACCAGGCTATCCAGCTGGCCCTGGATCTGTTTTTGTTCCGCCGCCGATGACTTCACGGAGGCTTCCTGCGCCAg                                     <  2:3085321/93‑1 (MQ=255)
                                                     tGAGAATGTTCACCCAACCCCAGGCTATCCAGCTGGCCCTGGATCTGTTTTTGTTCCGCCGCCGATGACTTCACGGAGGCTTCCTGCGCCAGa                                    <  1:1462688/93‑1 (MQ=255)
                                                       agaATGTTCACCCAACACCAGGCTATCCAGCTGGCCCTGTATCTGTTTTTGTTCCGCCGCCGATGACTTCACGGAGGCTTCCTGCGCCAGATa                                  >  1:6224703/1‑93 (MQ=255)
                                                       agaATGTTCACCCAACACCAGGCTATCCAGCTGGCCCTGGATCTGTTTTTGTTCCGCCGCCGATGACTTCACGGAGGCTTCCTGCGCCAGATa                                  >  2:6705794/1‑93 (MQ=255)
                                                        gaATGTTCACCCAACACCAGGCTATCCAGCTGGCCCTGGATCTGTTTTTGTTCCGCCGCCGATGACTTCACGGAGGCTTCCTGCGCCAGATaa                                 >  1:3340015/1‑93 (MQ=255)
                                                         aaTGTTCACCCAACACCAGGCTATCCAGCTGGCCCTGGATCTGTTTTTGTTCCGCCGCCGATGACTTCACGGAGGCTTCCTGCGCCAGATAAt                                <  1:692779/93‑1 (MQ=255)
                                                          aTGTTCACCCAACACCAGGCTATCCAGCTGGCCCTGGATCTGTTTTTGTTCCGCCGCCGATGACTTCACGGAGGCTTCCTGCGCCAGATAAtt                               <  1:1192938/93‑1 (MQ=255)
                                                           tGTTCACCCAACACCAGGCTATCCAGCTGGCCCTGGATCTGTTTTTGTTCCGCCGCCGATGACTTCACGGAGGCTTCCTGCGCCAGATAAttt                              <  2:5270640/93‑1 (MQ=255)
                                                            gTTCACCCAACACCAGGCTATCCAGCTGGCCCTGGATCTGTTTTTGTTCCGCCGCCGATGACTTCACGGAGGCTTCCTGCGCCAGATAAtttt                             >  2:4220005/1‑93 (MQ=255)
                                                              tCACCCACCACCAGGCTATCCAGCTGGCCCTGGATCTGTTTTTGTTCCGCCGCCGATGACTTCACGGAGGCTTCCTGCGCCAGATAATTTTGc                           <  1:5467779/93‑1 (MQ=255)
                                                              tCACCCAACACCAGGCTATCCAGCTGGCCCTGGATCTGTTTTTGTTCCGCCGCCGATGACTTCACGGAGGCTTCCTGCGCCAGATAATTTTGc                           <  1:295696/93‑1 (MQ=255)
                                                              tCACCCAACACCAGGCTATCCAGCTGGCCCTGGATCTGTTTTTGTTCCGCCGCCGATGACTTCACGGAGGCTTCCTGCGCCAGATAATTTTGc                           <  2:3073843/93‑1 (MQ=255)
                                                              tCACCCAACACCAGGCTATCCAGCTGGCCCTGGATCTGTTTTTGTTCCGCCGCCGATGACTTCACGGAGGCTTCCTGCGCCAGATAATTTTGc                           <  1:3797311/93‑1 (MQ=255)
                                                                 cccAACACCAGGCTATCCAGCTGGCCCTGGATCTGTTTTTGTTCCGCCGCCGATGACTTCACGGAGGCTTCCTGCGCCAGATAATTTTGCcgc                        >  2:6324990/1‑93 (MQ=255)
                                                                 cccAACACCAGGCTATCCAGCTGGCCCTGGATCTGTTTTTGTTCCGCCGCCGATGACTTCACGGAGGCTTCCTGCGCCAGATAATTTTGCcgc                        >  1:5107077/1‑93 (MQ=255)
                                                                  ccAACACCAGGCTATCCAGCTGGCCCTGGATCTGTTTTTGTTCCGCCGCCGATGACTTCACGGAGGCTTCCTGCGCCAGATAATTTTGCcgcg                       >  2:3994203/1‑93 (MQ=255)
                                                                   cAACACCAGGCTATCCAGCTGGCCCTGGATCTGTTTTTGTTCCGCCGCCGATGACTTCACGGAGGCTTCCTGCGCCAGATAATTTTGCCgcgc                      >  2:2587660/1‑93 (MQ=255)
                                                                    aaCACCAGGCTATCCAGCTGGCCCTGGATCTGTTTTTGTTCCGCCGCCGATGACTTCACGGAGGCTTCCTGCGCCAGATAATTTTGCCGCGcc                     >  1:1832021/1‑93 (MQ=255)
                                                                    aaCACCAGGCTATCCAGCTGGCCCTGGATCTGTTTTTGTTCCGCCGCCGATGACTTCACGGAGGCTTCCTGCGCCAGATAATTTTGCCGCGcc                     >  1:1594719/1‑93 (MQ=255)
                                                                       acCAGGCTATCCAGCTGGCTCTGGATCTGTTTTTGTTCCGCCGCCGATGACTTCACGGAGGCTTCCTGCGCCAGATAATTTTGCCGCGCcaca                  >  2:2281900/1‑93 (MQ=255)
                                                                       acCAGGCTATCCAGCTGGCCCTGGATCTGTTTTTGTTCCGCCGCCGATGACTTCACGGAGGCTTCCTGCGCCAGATAATTTTGCCGCGCcaca                  <  1:3889004/93‑1 (MQ=255)
                                                                         cAGGCTATCCAGCTGGCCCTGGATCTGTTTTTGTTCCGCCGCCGATGACTTCACGGAGGCTTCCTGCGCCAGATAATTTTGCCGCGCCACATc                <  1:2700250/93‑1 (MQ=255)
                                                                           ggCTATCCAGCTGGCCCTGGATCTGTTTTTGTTCCGCCGCCGATGACTTCACGGAGGCTTCCTGCGCCAGATAATTTTGCCGCGCCACATCGa              >  1:5052171/1‑93 (MQ=255)
                                                                            gCTATCCAGCTGGCTCTGGATCTGTTTTTGTTCCGCCGCCGATGACTTCACGGAGGCTTCCTGCGCCAGATAATTTTGCCGCGCCACATCGat             <  1:665580/93‑1 (MQ=255)
                                                                            gCTATCCAGCTGGCCCTGGATCTGTTTTTGTTCCGCCGCCGATGACTTCACGGAGGCTTCCTGCGCCAGATAATTTTGCCGCGCCACATCGat             <  2:4705334/93‑1 (MQ=255)
                                                                              tATCCAGCTGGCTCTGGATCTGTTTTTGTTCCGCCGCCGATGACTTCACGGAGGCTTCCTGCGCCAGATAATTTTGCCGCGCCACATCGatat           <  2:5721820/93‑1 (MQ=255)
                                                                              tATCCAGCTGGCCCTGGATCTGTTTTTGTTCCGCCGCCGATGACTTCACGGAGGCTTCCTGCGCCAGATAATTTTGCCGCGCCACATCGatat           >  2:2152084/1‑93 (MQ=255)
                                                                               aTCCAGCTGGCTCTGGATCTGTTTTTGTTCCGCCGCCGATGACTTCACGGAGGCTTCCTGCGCCAGATAATTTTGCCGCGCCACATCGATATc          >  1:5438302/1‑93 (MQ=255)
                                                                                 ccAGCTGGCCCTGGATCTGTTTTTGTTCCGCCGCCGATGACTTCACGGAGGCTTCCTGCGCCAGATAATTTTGCCGCGCCACATCGATATcgc        <  2:4300769/93‑1 (MQ=255)
                                                                                  cAGCTGGCTCTGGATCTGTTTTTGTTCCGCCGCCGATGACTTCACGGAGGCTTCCTGCGCCAGATAATTTTGCCGCGCCACATCGATATcgcg       >  2:1418585/1‑93 (MQ=255)
                                                                                  cAGCTGGCCCTGGATCTGTTTTTGTTCCGCCGCCGATGACTTCACGGAGGCTTCCTGCGCCAGATAATTTTGCCGCGCCACATCGATATcgcg       >  1:4875548/1‑93 (MQ=255)
                                                                                   aGCTGGCCCTGGATCTGTTTTTGTTCCGCCGCCGATGACTTCACGGAGGCTTCCTGCGCCAGATAATTTTGCCGCGCCACATCGATATCGCGt      <  1:2246692/93‑1 (MQ=255)
                                                                                   aGCTGGCCCTGGATCTGTTTTTGTTCCGCCGCCGATGACTTCACGGAGGCTTCCTGCGCCAGATAATTTTGCCGCGCCACATCGATATCGCGt      <  1:5693757/93‑1 (MQ=255)
                                                                                   aGCTGGCCCTGGATCTGTTTTTGTTCCGCCGCCGATGACTTCACGGAGGCTTCCTGCGCCAGATAATTTTGCCGCGCCACATCGATATCGCGt      <  1:2844259/93‑1 (MQ=255)
                                                                                    gCTGGCCCTGGATCTGTTTTTGTTCCGCCGCCGATGACTTCACGGAGGCTTCCTGCGCCAGATAATTTTGCCGCGCCACATCGATATCGCGtt     >  2:2773406/1‑93 (MQ=255)
                                                                                     cTGGCTCTGGATCTGTTTTTGTTCCGCCGCCGATGACTTCACGGAGGCTTCCTGCGCCAGATAATTTTGCCGCGCCACATCGATATCGCGTTc    <  1:474330/93‑1 (MQ=255)
                                                                                      tGGCCCTGGATCTGTTTTTGTTCCGCCGCCGATGACTTCACGGAGGCTTCCTGCGCCAGACAATTTTGCCGCGCCACATCGATATCGCGTTCt   >  1:2068446/1‑93 (MQ=255)
                                                                                          |                                                                                         
TCTGCTCAAGGTTATATTTTGCTTCCGCGAGCTGTGCTTTCAGGCTGGCGATTTGAGAATGTTCACCCAACACCAGGCTATCCAGCTGGCTCTGGATCTGTTTTTGTTCCGCCGCCGATGACTTCACGGAGGCTTCCTGCGCCAGATAATTTTGCCGCGCCACATCGATATCGCGTTCTG  >  NC_000913/3751072‑3751251

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: