Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 434,599 T→C V80A (GTA→GCA)  nusB → transcription termination

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913434,5990TC85.2% 710.1 / 101.0 298V80A (GTA→GCA) nusBtranscription termination
Reads supporting (aligned to +/- strand):  ref base T (19/25);  new base C (128/126);  total (147/151)
Fisher's exact test for biased strand distribution p-value = 4.17e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01

Only 100 of 299 total aligned reads displayed.

GAGCTGCTGGCCGGGGTGGCGACTAATACCGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGTAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATACAAAGTGGCCATTAACGAAGCGATCGAACTGG  >  NC_000913/434508‑434691
                                                                                           |                                                                                            
 aGCTGCTGGCCGGGGTGGCGACTAATACCGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGTAg                                                                                            >  1:1567098/1‑93 (MQ=255)
 aGCTGCTGGCCGGGGTGGCGACTAATACCGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAg                                                                                            >  1:1035606/1‑93 (MQ=255)
  gctgctGGCCGGGGTGGCGACTAATCCCGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGa                                                                                           <  1:4239648/93‑1 (MQ=255)
  gctgctGGCCGGGGTGGCGACTAATACCGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGa                                                                                           >  1:5970411/1‑93 (MQ=255)
   ctgctgGCCGGGGTGGCGACTAATACCGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGTAGaa                                                                                          <  2:1606254/93‑1 (MQ=255)
     gctgGCCGGGGTGGCGACTAATACCGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGaaaa                                                                                        <  2:4252696/93‑1 (MQ=255)
      ctgGCGGGGGTGGCGACTAATACCGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGTAGaaaaa                                                                                       <  1:6708224/93‑1 (MQ=255)
      ctgGCCGGGGTGGCGACTAATACCGCATCCCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGTAGaaaaa                                                                                       <  1:7495042/93‑1 (MQ=255)
      ctgGCCGGGCGGGCGACTAATACCGCTTGCCTCGACGGCCTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGaaaaa                                                                                       <  2:2298355/93‑1 (MQ=255)
        ggCCGGGGTGGCGACTAATACCGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGc                                                                                     >  2:5352086/1‑93 (MQ=255)
        ggCCGGGGTGGCGACTAATACCGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGc                                                                                     <  1:1760118/93‑1 (MQ=255)
         gCCGGGGTGGCGACTAATACCGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCa                                                                                    >  1:6459002/1‑93 (MQ=255)
          ccGGGGTGGCGACTAATACCGCATCCCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAg                                                                                   <  1:1613266/93‑1 (MQ=255)
          ccGGGGTGGCGACTAATACCGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAg                                                                                   <  2:3946111/93‑1 (MQ=255)
          ccGGGGTGGCGACTAATACCGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAg                                                                                   <  2:3778701/93‑1 (MQ=255)
            ggggTGGCGACTAATACCGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTa                                                                                 >  1:1124079/1‑93 (MQ=255)
             gggTGGCGACTAATACCGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTAc                                                                                <  2:1405445/93‑1 (MQ=255)
             gggTGGCGACTAATACCGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTAc                                                                                >  1:4142106/1‑93 (MQ=255)
               gTGGCGACTAATACCGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTg                                                                              <  2:2861472/93‑1 (MQ=255)
                tGGCGACTAATACCGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGTAGAAAAAGCAGTACTgc                                                                             >  2:3046664/1‑93 (MQ=255)
                tGGCGACTAATACCGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTgc                                                                             >  1:2289333/1‑93 (MQ=255)
                  gCGACTAATACCGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGTAGAAAAAGCAGTACTgcgc                                                                           >  2:7488259/1‑93 (MQ=255)
                    gACTAATACCGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCAt                                                                         <  2:5784375/93‑1 (MQ=255)
                      cTAATACCGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTg                                                                       >  1:3948773/1‑93 (MQ=255)
                       tAATACCGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGTAGAAAAAGCAGTACTGCGCATTgc                                                                      >  2:1931851/1‑93 (MQ=255)
                       tAATACCGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGTAGAAAAAGCAGTACTGCGCATTgc                                                                      >  1:5246972/1‑93 (MQ=255)
                       tAATACCGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGTAGAAAAAGCAGTACTGCGCATTgc                                                                      <  2:2717610/93‑1 (MQ=255)
                       tAATACCGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTgc                                                                      >  1:1520829/1‑93 (MQ=255)
                       tAATACCGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCCGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTgc                                                                      >  2:2635322/1‑93 (MQ=255)
                         aTACCGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTgcgc                                                                    >  1:2910735/1‑93 (MQ=255)
                         aTACCGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTgcgc                                                                    >  2:6822558/1‑93 (MQ=255)
                            ccGCATCCCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGt                                                                 <  1:5387897/93‑1 (MQ=255)
                            ccGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGt                                                                 <  2:899495/93‑1 (MQ=255)
                            ccGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGt                                                                 >  2:6432031/1‑93 (MQ=255)
                            ccGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGt                                                                 >  1:6225109/1‑93 (MQ=255)
                             cGCATCCCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGTAGAAAAAGCAGTACTGCGCATTGCGCTGTa                                                                <  2:7169809/93‑1 (MQ=255)
                             cGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTa                                                                <  2:6127655/93‑1 (MQ=255)
                              gCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTAc                                                               >  2:4525271/1‑93 (MQ=255)
                              gCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTAc                                                               >  1:2473016/1‑93 (MQ=255)
                                 tcccTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGTAGAAAAAGCAGTACTGCGCATTGCGCTGTACGaa                                                            <  1:3910580/91‑1 (MQ=255)
                                 tACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGaa                                                            <  2:4151624/93‑1 (MQ=255)
                                 tACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGaa                                                            >  1:3632834/1‑93 (MQ=255)
                                   ccTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACt                                                          >  2:5569413/1‑93 (MQ=255)
                                   ccTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACt                                                          <  1:3513938/93‑1 (MQ=255)
                                    cTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTg                                                         >  2:506416/1‑93 (MQ=255)
                                     tCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGt                                                        >  2:784734/1‑93 (MQ=255)
                                     tCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGt                                                        >  1:2635271/1‑93 (MQ=255)
                                     tCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGt                                                        >  2:1067672/1‑93 (MQ=255)
                                      cGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTc                                                       <  1:6075674/93‑1 (MQ=255)
                                       gACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGTAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCt                                                      <  1:469652/93‑1 (MQ=255)
                                        aCGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGTAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTa                                                     >  2:4402785/1‑93 (MQ=255)
                                        aCGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTa                                                     <  1:5196365/93‑1 (MQ=255)
                                          ggACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTaaa                                                   >  1:3241708/1‑93 (MQ=255)
                                          ggACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTaaa                                                   <  2:6535753/93‑1 (MQ=255)
                                           gACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAAc                                                  >  1:4866272/1‑93 (MQ=255)
                                            aCTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACg                                                 <  1:6010060/93‑1 (MQ=255)
                                            aCTGATGAAGCCATACCTGTCCCGCCCGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACg                                                 <  1:3732305/93‑1 (MQ=255)
                                             cTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGTAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGt                                                <  2:3147962/93‑1 (MQ=255)
                                               gatgaAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAg                                              >  2:1433496/1‑93 (MQ=255)
                                               gatgaAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAg                                              <  1:2562450/93‑1 (MQ=255)
                                               gatgaAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAg                                              <  1:4355130/93‑1 (MQ=255)
                                                atgaAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGc                                             <  2:849324/93‑1 (MQ=255)
                                                 tgaAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCg                                            >  2:7025274/1‑93 (MQ=255)
                                                  gaAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGa                                           >  1:7057317/1‑93 (MQ=255)
                                                  gaAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGa                                           <  1:3121424/93‑1 (MQ=255)
                                                    aGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGAtg                                         <  1:1706888/93‑1 (MQ=255)
                                                     gCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGTAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGAtgt                                        >  1:3149386/1‑93 (MQ=255)
                                                     gCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGTAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGAtgt                                        <  1:5569644/93‑1 (MQ=255)
                                                      ccATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGTAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGAtgtg                                       >  2:4217306/1‑93 (MQ=255)
                                                      ccATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGAtgtg                                       >  1:1855057/1‑93 (MQ=255)
                                                       cATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGTAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGc                                      >  2:4617098/1‑93 (MQ=255)
                                                        aTACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGTAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGcc                                     >  1:5496142/1‑93 (MQ=255)
                                                        aTACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGTAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGcc                                     <  1:1991124/93‑1 (MQ=255)
                                                            cTGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATAc                                 <  2:1510102/93‑1 (MQ=255)
                                                             tGTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATACa                                >  1:7345361/1‑93 (MQ=255)
                                                              gTCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATACaa                               >  2:2476190/1‑93 (MQ=255)
                                                               tCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATACaaa                              >  2:3665675/1‑93 (MQ=255)
                                                               tCCCGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATACaaa                              >  2:3552150/1‑93 (MQ=255)
                                                                 ccGCCTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATACAAAGt                            >  2:485182/1‑93 (MQ=255)
                                                                    ccTGCTGGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATACAAAGTGGc                         <  2:5187741/93‑1 (MQ=255)
                                                                     ctgctgGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATACAAAGTGGcc                        >  1:5468985/1‑93 (MQ=255)
                                                                      tgctgGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATACAAAGTGGCCa                       >  1:4492924/1‑93 (MQ=255)
                                                                       gctgGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATACAAAGTGGCCAt                      <  2:6919/93‑1 (MQ=255)
                                                                         tgGAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATACAAAGTGGCCATTa                    <  2:4706397/93‑1 (MQ=255)
                                                                          ggAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATACAAAGTGGCCATTaa                   >  1:6828734/1‑93 (MQ=255)
                                                                          ggAAGAACTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATACAAAGTGGCCATTaa                   <  2:6351736/93‑1 (MQ=255)
                                                                           gaagaaCTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATACAAAGTGGCCATTAAc                  <  2:210407/93‑1 (MQ=255)
                                                                            aagaaCTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATACAAAGTGGCCATTAACg                 >  1:3306896/1‑93 (MQ=255)
                                                                              gaaCTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATACAAAGTGGCCATTAACGaa               <  1:5804421/93‑1 (MQ=255)
                                                                              gaaCTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATACAAAGTGGCCATTAACGaa               <  2:6865234/93‑1 (MQ=255)
                                                                              gaaCTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATACAAAGTGGCCATTAACGaa               <  2:5127255/93‑1 (MQ=255)
                                                                               aaCTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATACAAAGTGGCCATTAACGAAg              <  1:928204/93‑1 (MQ=255)
                                                                                aCTGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATACAAAGTGGCCATTAACGAAGc             >  1:7189061/1‑93 (MQ=255)
                                                                                  tGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATACAAAGTGGCCATTAACGAAGCGa           >  1:1289456/1‑93 (MQ=255)
                                                                                  tGGGACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATACAAAGTGGCCATTAACGAAGCGa           <  2:4161651/93‑1 (MQ=255)
                                                                                   gggACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATACAAAGTGGCCATTAACGAAGCGAt          <  1:2113682/93‑1 (MQ=255)
                                                                                    ggACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATACAAAGTGGCCATTAACGAAGCGATc         >  2:7239016/1‑93 (MQ=255)
                                                                                    ggACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATACAAAGTGGCCATTAACGAAGCGATc         >  2:254276/1‑93 (MQ=255)
                                                                                     gACAGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATACAAAGTGGCCATTAACGAAGCGATCg        <  1:3810121/93‑1 (MQ=255)
                                                                                        aGGCAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATACAAAGTGGCCATTAACGAAGCGATCGagc     <  1:6436672/93‑3 (MQ=255)
                                                                                           |                                                                                            
GAGCTGCTGGCCGGGGTGGCGACTAATACCGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGTAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATACAAAGTGGCCATTAACGAAGCGATCGAACTGG  >  NC_000913/434508‑434691

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: