BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,856,410	A→G	I445T (ATC→ACC)	yidK ←	putative cotransporter

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,856,410	0	A	G	80.7%	640.0 / 164.1	316	I445T (ATC→ACC)	yidK	putative cotransporter
Reads supporting (aligned to +/- strand): ref base A (26/35); new base G (113/142); total (139/177)
Fisher's exact test for biased strand distribution p-value = 8.86e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 317 total aligned reads displayed.

CATCACGACCACGTTGATGCAGAACGTACAGGCCAGCACATAGAGGAAATGGAAGTCGAACTTCACCAGATAGTTGATGGTGATGTAGCTGATTATGCCAATCCCCATCGCTACTTTTGCCGCCAGCGCCGGGATGCGCGGGAAGAAAAAGCCCATAATGATGATGGTAACCAGCGGCACGTTG  >  NC_000913/3856319‑3856502

 aTCACGACCACGTTGATGCAGAACGTACAGGCCAGCACATAGAGGAAATGGAAGTCGAACTTCACCAGATAGTTGATGGTGATGTAGCTGGtt                                                                                            >  2:2098219/1‑93 (MQ=255)

 aTCACGACCACGTTGATGCAGAACGTACAGGCCAGCACATAGAGGAAATGGAAGTCGAACTTCACCAGATAGTTGATGGTGATGTAGCTGGtt                                                                                            <  1:2835858/93‑1 (MQ=255)

  tCACGACCACGTTGATGCAGAACGTACAGGCCAGCACATAGAGGAAATGGAAGTCGAACTTCACCAGATAGTTGATGGTGATGTAGCTGGTTa                                                                                           <  1:5086267/93‑1 (MQ=255)

  tCACGACCACGTTGATGCAGAACGTACAGGCCAGCACATAGAGGAAATGGAAGTCGAACTTCACCAGATAGTTGATGGTGATGTAGCTGGTTa                                                                                           <  2:3573852/93‑1 (MQ=255)

  tCACGACCACGTTGATGCAGAACGTACAGGCCAGCACATAGAGGAAATGGAAGTCGAACTTCACCAGATAGTTGATGGTGATGTAGCTGGTTa                                                                                           <  2:1427752/93‑1 (MQ=255)

  tCACGACCACGTTGATGCAGAACGTACAGGCCAGCACATAGAGGAAATGGAAGTCGAACTTCACCAGATAGTTGATGGTGATGTAGCTGGTTa                                                                                           <  2:6599187/93‑1 (MQ=255)

  tCACGACCACGTTGATGCAGAACGTACAGGCCAGCACATAGAGGAAATGGAAGTCGAACTTCACCAGATAGTTGATGGTGATGTAGCTGGTTa                                                                                           <  1:4372458/93‑1 (MQ=255)

  tCACGACCACGTTGATGCAGAACGTACAGGCCAGCACATAGAGGAAATGGAAGTCGAACTTCACCAGATAGTTGATGGTGATGTAGCTGGTTa                                                                                           >  2:6337296/1‑93 (MQ=255)

   cACGACCACGTTGATGCAGAACGTACAGGCCAGCACATAGAGGAAATGGAAGTCGAACTTCACCAGATAGTTGATGGTGATGTAGCTGGTTAt                                                                                          <  2:2754633/93‑1 (MQ=255)

    aCGACCACGTTGATGCAGAACGTACAGGCCAGCACATAGAGGAAATGGAAGTCGAACTTCACCAGATAGTTGATGGTGATGTAGCTGGTTATg                                                                                         >  1:1763177/1‑93 (MQ=255)

     cGACCACGTTGATGCAGAACGTACAGGCCAGCACATAGAGGAAATGGAAGTCGAACTTCACCAGATAGTTGATGGTGATGTAGCTGGTTATGc                                                                                        <  2:6543707/93‑1 (MQ=255)

      gACCACGTTGATGCAGAACGTACAGGCCAGCACATAGAGGAAATGGAAGTCGAACTTCACCAGATAGTTGATGGTGATGTAGCTGGTTATGcc                                                                                       >  1:4740246/1‑93 (MQ=255)

         cACGTTGATGCAGAACGTACAGGCCAGCACATAGAGGAAATGGAAGTCGAACTTCACCAGATAGTTGATGGTGATGTAGCTGGTTATGCCAAt                                                                                    <  1:7315109/93‑1 (MQ=255)

           cGTTGATGCAGAACGTACAGGCCAGCACATAGAGGAAATGGAAGTCGAACTTCACCAGATAGTTGATGGTGATGTAGCTGATTATGCCAATcc                                                                                  <  2:3322122/93‑1 (MQ=255)

            gTTGATGCAGAACGTACAGGCCAGCACATAGAGGAAATGGAAGTCGAACTTCACCAGATAGTTGATGGTGATGTAGCTGGTTATGCCAATccc                                                                                 <  2:7525032/93‑1 (MQ=255)

             ttGATGCAGAACGTACAGGCCAGCACATAGAGGAAATGGAAGTCGAACTTCACCAGATAGTTGATGGTGATGTAGCTGGTTATGCCAATcccc                                                                                <  1:2287998/93‑1 (MQ=255)

             ttGATGCAGAACGTACAGGCCAGCACATAGAGGAAATGGAAGTCGAACTTCACCAGATAGTTGATGGTGATGTAGCTGGTTATGCCAATcccc                                                                                >  2:3531497/1‑93 (MQ=255)

             ttGATGCAGAACGTACAGGCCAGCACATAGAGGAAATGGAAGTCGAACTTCACCAGATAGTTGATGGTGATGTAGCTGGTTATGCCAATcccc                                                                                <  2:4242255/93‑1 (MQ=255)

              tGATGCAGAACGTACAGGCCAGCACATAGAGGAAATGGAAGTCGAACTTCACCAGATAGTTGATGGTGATGTAGCTGGTTATGCCAATCCCCa                                                                               <  2:302816/93‑1 (MQ=255)

               gATGCAGAACGTACAGGCCAGCACATAGAGGAAATGGAAGTCGAACTTCACCAGATAGTTGATGGTGATGTAGCTGATTATGCCAACCCCCAt                                                                              <  2:7094137/93‑1 (MQ=255)

                aTGCAGAACGTACAGGCCAGCACATAGAGGAAATGGAAGTCGAACTTCACCAGATAGTTGATGGTGATGTAGCTGGTTATGCCAATCCCCATc                                                                             <  1:3448098/93‑1 (MQ=255)

                aTGCAGAACGTACAGGCCAGCACATAGAGGAAATGGAAGTCGAACTTCACCAGATAGTTGATGGTGATGTAGCTGGTTATGCCAATCCCCATc                                                                             <  1:1314720/93‑1 (MQ=255)

                 tGCAGAACGTACAGGCCAGCACATAGAGGAAATGGAAGTCGAACTTCACCAGATAGTTGATGGTGATGTAGCTGGTTATGCCAATCCCCATCg                                                                            >  2:5880478/1‑93 (MQ=255)

                  gCAGAACGTACAGGCCAGCACATAGAGGAAATGGAAGTCGAACTTCACCAGATAGTTGATGGTGATGTAGCTGGTTATGCCAATCCCCATCGc                                                                           <  1:6433302/93‑1 (MQ=255)

                  gCAGAACGTACAGGCCAGCACATAGAGGAAATGGAAGTCGAACTTCACCAGATAGTTGATGGTGATGTAGCTGATTATGCCAATCCCCATCGc                                                                           <  1:5852911/93‑1 (MQ=255)

                     gAACGTACAGGCCAGCACATAGAGGAAATGGAAGTCGAACTTCACCAGATAGTTGATGGTGATGTAGCTGGTTATGCCAATCCCCATCGCTAc                                                                        <  1:1154112/93‑1 (MQ=255)

                     gAACGTACAGGCCAGCACATAGAGGAAATGGAAGTCGAACTTCACCAGATAGTTGATGGTGATGTAGCTGGTTATGCCAATCCCCATCGCTAc                                                                        <  1:4945584/93‑1 (MQ=255)

                     gAACGTACAGGCCAGCACATAGAGGAAATGGAAGTCGAACTTCACCAGATAGTTGATGGTGATGTAGCTGATTATGCCAATCCCCATCGCTAc                                                                        >  2:3974928/1‑93 (MQ=255)

                     gAACGTACAGGCCAGCACATAGAGGAAATGGAAGTCGAACTTCACCAGATAGTTGATGGTGATGTAGCTGATTATGCCAATCCCCATCGCTAc                                                                        <  2:1334894/93‑1 (MQ=255)

                       aCGTACAGGCCAGCACATAGAGGAAATGGAAGTCGAACTTCACCAGATAGTTGATGGTGATGTAGCTGGTTATGCCAATCCCCATCGCTACtt                                                                      <  2:3621249/93‑1 (MQ=255)

                         gTACAGGCCAGCACATAGAGGAAATGGAAGTCGAACTTCACCAGATAGTTGATGGTGATGTAGCTGGTTATGCCAATCCCCATCGCTACtttt                                                                    >  2:5811348/1‑93 (MQ=255)

                         gTACAGGCCAGCACATAGAGGAAATGGAAGTCGAACTTCACCAGATAGTTGATGGTGATGTAGCTGGTTATGCCAATCCCCATCGCTACtttt                                                                    <  2:664354/93‑1 (MQ=255)

                         gTACAGGCCAGCACATAGAGGAAATGGAAGTCGAACTTCACCAGATAGTTGATGGTGATGTAGCTGGTTATGCCAATCCCCATCGCTACtttt                                                                    >  1:930792/1‑93 (MQ=255)

                          tACAGGCCAGCACATAGAGGAAATGGAAGTCGAACTTCACCAGATAGTTGATGGTGATGTAGCTGATTATGCCAATCCCCATCGCTACTTTTg                                                                   >  1:1687209/1‑93 (MQ=255)

                           aCAGGCCAGCACATAGAGGAAATGGAAGTCGAACTTCACCAGATAGTTGATGGTGATGTAGCTGGTTATGCCAATCCCCATCGCTACTTTTgc                                                                  <  1:5457137/93‑1 (MQ=255)

                           aCAGGCCAGCACATAGAGGAAATGGAAGTCGAACTTCACCAGATAGTTGATGGTGATGTAGCTGGTTATGCCAATCCCCATCGCTACTTTTgc                                                                  >  2:6192523/1‑93 (MQ=255)

                              ggCCAGCACATAGAGGAAATGGAAGTCGAACTTCACCAGATAGTTGATGGTGATGTAGCTGGTTATGCCAATCCCCATCGCTACTTTTgccgc                                                               <  2:1766177/93‑1 (MQ=255)

                                ccAGCACATAGAGGAAATGGAAGTCGAACTTCACCAGATAGTTGATGGTGATGTAGCTGGTTATGCCAATCCCCATCGCTACTTTTGCCGCCa                                                             <  1:6609139/93‑1 (MQ=255)

                                ccAGCACATAGAGGAAATGGAAGTCGAACTTCACCAGATAGTTGATGGTGATGTAGCTGGTTATGCCAATCCCCATCGCTACTTTTGCCGCCa                                                             <  1:1963422/93‑1 (MQ=255)

                                 cAGCACATAGAGGAAATGGAAGTCGAACTTCACCAGATAGTTGATGGTGATGTAGCTGGTTATGCCAATCCCCATCGCTACTTTTGCCGCCAg                                                            <  1:7072908/93‑1 (MQ=255)

                                 cAGCACATAGAGGAAATGGAAATCGAACTTCACCAGATAATTGATGGTGATGTAGCTGATTATGCCAATCCCCATCGCTACTTTTGCCGCCaa                                                            >  1:6223619/1‑92 (MQ=255)

                                    cacaTAGAGGAAATGGAAGTCGAACTTCACCAGATAGTTGATGGTGATGTAGCTGGTTATGCCAATCCCCATCGCTACTTTTGCCGCCAgcgc                                                         >  1:1245414/1‑93 (MQ=255)

                                       aTAGAGGAAATGGAAGTCGAACTTCACCAGATAGTTGATGGTGATGTAGCTGGTTATGCCAATCCCCATCGCTACTTTTGCCGCCAGCGCCgg                                                      <  2:5365858/93‑1 (MQ=255)

                                       aTAGAGGAAATGGAAGTCGAACTTCACCAGATAGTTGATGGTGATGTAGCTGGTTATGCCAATCCCCATCGCTACTTTTGCCGCCAGCGCCgg                                                      <  1:2743559/93‑1 (MQ=255)

                                       aTAGAGGAAATGGAAGTCGAACTTCACCAGATAGTTGATGGTGATGTAGCTGGTTATGCCAATCCCCATCGCTACTTTTGCCGCCAGCGCCgg                                                      >  1:4211627/1‑93 (MQ=255)

                                       aTAGAGGAAATGGAAGTCGAACTTCACCAGATAGTTGATGGTGATGTAGCTGATTATGCCAATCCCCATCGCTACTTTTGCCGCCAGCGCCgg                                                      <  2:1990145/93‑1 (MQ=255)

                                        tAGAGGAAATGGAAGTCGAACTTCACCAGATAGTTGATGGTGATGTAGCTGGTTATGCCAATCCCCATCGCTACTTTTGCCGCCAGCGCCggg                                                     >  1:6951920/1‑93 (MQ=255)

                                        tAGAGGAAATGGAAGTCGAACTTCACCAGATAGTTGATGGTGATGTAGCTGGTTATGCCAATCCCCATCGCTACTTTTGCCGCCAGCGCCggg                                                     >  2:2443575/1‑93 (MQ=255)

                                        tAGAGGAAATGGAAGTCGAACTTCACCAGATAGTTGATGGTGATGTAGCTGATTATGCCAATCCCCATCGCTACTTTTGCCGCCAGCGCCggg                                                     <  2:1678652/93‑1 (MQ=255)

                                          gagGAAATGGAAGTCGAACTTCACCAGATAGTTGATGGTGATGTAGCTGGTTATGCCAATCCCCATCGCTACTTTTGCCGCCAGCGCCGGGAt                                                   >  2:1664834/1‑93 (MQ=255)

                                           agGAAATGGAAGTCGAACTTCACCAGATAGTTGATGGTGATGTAGCTGGTTATGCCAATCCCCATCGCTACTTTTGCCGCCAGCGCCGGGATg                                                  >  2:5475968/1‑93 (MQ=255)

                                            ggAAATGGAAGTCGAACTTCACCAGATAGTTGATGGTGATGTAGCTGATTATGCCAATCCCCATCGCTACTTTTGCCGCCAGCGCCGGGATgc                                                 >  2:2927232/1‑93 (MQ=255)

                                            ggAAATGGAAGTCGAACTTCACCAGATAGTTGATGGTGATGTAGCTGATTATGCCAATCCCCATCGCTACTTTTGCCGCCAGCGCCGGGATgc                                                 <  1:4842212/93‑1 (MQ=255)

                                              aaaTGGAAGTCGAACTTCACCAGATAGTTGATGGTGATGTAGCTGGTTATGCCAATCCCCATCGCTACTTTTGCCGCCAGCGCCGGGATgcgc                                               <  1:4143951/93‑1 (MQ=255)

                                              aaaTGGAAGTCGAACTTCACCAGATAGTTGATGGTGATGTAGCTGGTTATGCCAATCCCCATCGCTACTTTTGCCGCCAGCGCCGGGATgcgc                                               <  2:3660183/93‑1 (MQ=255)

                                              aaaTGGAAGTCGAACTTCACCAGATAGTTGATGGTGATGTAGCTGATTATGCCAATCCCCATCGCTACTTTTGCCGCCAGCGCCGGGATgcgc                                               <  1:1048811/93‑1 (MQ=255)

                                                aTGGAAGTCGAACTTCACCAGATAGTTGATGGTGATGTAGCTGGTTATGCCAATCCCCATCGCTACTTTTGCCGCCAGCGCCGGGATGCGCgg                                             <  1:1530207/93‑1 (MQ=255)

                                                   gAAGTCGAACTTCACCAGATAGTTGATGGTGATGTAGCTGGTTATGCCAATCCCCATCGCTACTTTTGCCGCCAGCGCCGGGATGCGCGGgaa                                          <  1:3327115/93‑1 (MQ=255)

                                                   gAAGTCGAACTTCACCAGATAGTTGATGGTGATGTAGCTGGTTATGCCAATCCCCATCGCTACTTTTGCCGCCAGCGCCGGGATGCGCGGgaa                                          >  1:595466/1‑93 (MQ=255)

                                                   gAAGTCGAACTTCACCAGATAGTTGATGGTGATGTAGCTGGTTATGCCAATCCCCATCGCTACTTTTGCCGCCAGCGCCGGGATGCGCGGgaa                                          >  1:3210505/1‑93 (MQ=255)

                                                     aGTCGAACTTCACCAGATAGTTGATGGTGATGTAGCTGGTTATGCCAATCCCCATCGCTACTTTTGCCGCCAGCGCCGGGATGCGCGGgaaga                                        <  2:2380283/93‑1 (MQ=255)

                                                     aGTCGAACTTCACCAGATAGTTGATGGTGATGTAGCTGATTATGCCAATCCCCATCGCTACTTTTGCCGCCAGCGCCGGGATGCGCGGgaaga                                        >  2:4975551/1‑93 (MQ=255)

                                                        cGAACTTCACCAGATAGTTGATGGTGATGTAGCTGGTTATGCCAATCCCCATCGCTACTTTTGCCGCCAGCGCCGGGATGCGCGGGAAGaaaa                                     <  2:69868/93‑1 (MQ=255)

                                                          aaCTTCACCAGATAGTTGATGGTGATGTAGCTGGTTATGCCAATCCCCATCGCTACTTTTGCCGCCAGCGCCGGGATGCGCGGGAAGAAAAAg                                   <  2:814076/93‑1 (MQ=255)

                                                             ttCACCAGATAGTTGATGGTGATGTAGCTGGTTATGCCAATCCCCATCGCTACTTTTGCCGCCAGCGCCGGGATGCGCGGGAAGAAAAAGccc                                <  2:5135069/93‑1 (MQ=255)

                                                              tCACCAGATAGTTGATGGTGATGTAGCTGGTTATGCCAATCCCCATCGCTACTTTTGCCGCCAGCGCCGGGATGCGCGGGAAGAAAAAGCCCa                               <  2:1907503/93‑1 (MQ=255)

                                                              tCACCAGATAGTTGATGGTGATGTAGCTGATTATGCCAATCCCCATCGCTACTTTTGCCGCCAGCGCCGGGATGCGCGGGAAGAAAAAGCCCa                               <  2:5956861/93‑1 (MQ=255)

                                                                aCCAGATAGTTGATGGTGATGTAGCTGGTTATGCCAATCCCCATCGCTACTTTTGCCGCCAGCGCCGGGATGCGCGGGAAGAAAAAGCCCATa                             >  1:1395260/1‑93 (MQ=255)

                                                                 ccAGATAGTTGATGGTGATGTAGCTGATTATGCCAATCCCCATCGCTACTTTTGCCGCCAGCGCCGGGATGCGCGGGAAGAAAAAGCCCATaa                            >  2:7328683/1‑93 (MQ=255)

                                                                  cAGATAGTTGATGGTGATGTAGCTGGTTATGCCAATCCCCATCGCTACTTTTGCCGCCAGCGCCGGGATGCGCGGGAAGAAAAAGCCCATAat                           <  2:294727/93‑1 (MQ=255)

                                                                   aGATAGTTGATGGTGATGTAGCTGGTTATGCCAATCCCCATCGCTACTTTTGCCGCCAGCGCCGGGATGCGCGGGAAGAAAAAGCCCATAatg                          <  1:7055993/93‑1 (MQ=255)

                                                                    gATAGTTGATGGTGATGTAGCTGGTTATGCCAATCCCCATCGCTACTTTTGCCGCCAGCGCCGGGATGCGCGGGAAGAAAAAGCCCATAatga                         <  1:5766234/93‑1 (MQ=255)

                                                                    gATAGTTGATGGTGATGTAGCTGGTTATGCCAATCCCCATCGCTACTTTTGCCGCCAGCGCCGGGATGCGCGGGAAGAAAAAGCCCATAatga                         >  2:3490299/1‑93 (MQ=255)

                                                                    gATAGTTGATGGTGATGTAGCTGGTTATGCCAATCCCCATCGCTACTTTTGCCGCCAGCGCCGGGATGCGCGGGAAGAAAAAGCCCATAatga                         >  2:3851485/1‑93 (MQ=255)

                                                                    gATAGTTGATGGTGATGTAGCTGATTATGCCAATCCCCATCGCTACTTTTGCCGCCAGCGCCGGGATGCGCGGGAAGAAAAAGCCCATAatga                         <  2:4578619/93‑1 (MQ=255)

                                                                     aTAGTTGATGGTGATGTAGCTGGTTATGCCAATCCCCATCGCTACTTTTGCCGCCAGCGCCGGGATGCGCGGGAAGAAAAAGCCCATAatgat                        <  2:5212755/93‑1 (MQ=255)

                                                                      tAGTTGATGGTGATGTAGCTGGTTATGCCAATCCCCATCGCTACTTTTGCCGCCAGCGCCGGGATGCGCGGGAAGAAAAAGCCCATAatgatg                       >  2:4035299/1‑93 (MQ=255)

                                                                       aGTTGATGGTGATGTAGCTGGTTATGCCAATCCCCATCGCTACTTTTGCCGCCAGCGCCGGGATGCGCGGGAAGAAAAAGCCCATAatgatga                      <  1:3956148/93‑1 (MQ=255)

                                                                       aGTTGATGGTGATGTAGCTGGTTATGCCAATCCCCATCGCTACTTTTGCCGCCAGCGCCGGGATGCGCGGGAAGAAAAAGCCCATAatgatga                      <  2:1102990/93‑1 (MQ=255)

                                                                           gATGGTGATGTAGCTGGTTATGCCAATCCCCATCGCTACTTTTGCCGCCAGCGCCGGGATGCGCGGGAAGAAAAAGCCCATAATGATGATGGt                  <  1:4520743/93‑1 (MQ=255)

                                                                           gATGGTGATGTAGCTGGTTATGCCAATCCCCATCGCTACTTTTGCCGCCAGCGCCGGGATGCGCGGGAAGAAAAAGCCCATAATGATGATGGt                  >  1:3286252/1‑93 (MQ=255)

                                                                            aTGGTGATGTAGCTGGTTATGCCAATCCCCATCGCTACTTTTGCCGCCAGCGCCGGGATGCGCGGGAAGAAAAAGCCCATAATGATGATGGTa                 >  2:776540/1‑93 (MQ=255)

                                                                              ggTGATGTAGCTGGTTATGCCAATCCCCATCGCTACTTTTGCCGCCAGCGCCGGGATGCGCGGGAAGAAAAAGCCCATAATGATGATGGTAAc               <  1:6707188/93‑1 (MQ=255)

                                                                               gTGATGTAGCTGGTTATGCCAATCCCCATCGCTACTTTTGCCGCCAGCGCCGGGATGCGCGGGAAGAAAAAGCCCATAATGATGATGGTAAcc              <  2:5260858/93‑1 (MQ=255)

                                                                                 gATGTAGCTGGTTATGCCAATCCCCATCGCTACTTTTGCCGCCAGCGCCGGGATGCGCGGGAAGAAAAAGCCCATAATGATGATGGTAACCAg            >  2:5635247/1‑93 (MQ=255)

                                                                                 gATGTAGCTGATTATGCCAATCCCCATCGCTACTTTTGCCGCCAGCGCCGGGATGCGCGGGAAGAAAAAGCCCATAATGATGATGGTAACCAg            <  2:5014752/93‑1 (MQ=255)

                                                                                  aTGTAGCTGGTTATGCCAATCCCCATCGCTACTTTTGCCGCCAGCGCCGGGATGCGCGGGAAGAAAAAGCCCATAATGATGATGGTAACCAGc           >  2:6038300/1‑93 (MQ=255)

                                                                                  aTGTAGCTGGTTATGCCAATCCCCATCGCTACTTTTGCCGCCAGCGCCGGGATGCGCGGGAAGAAAAAGCCCATAATGATGATGGTAACCAGc           >  2:1287378/1‑93 (MQ=255)

                                                                                   tGTAGCTGGTTATGCCAATCCCCATCGCTACTTTTGCCGCCAGCGCCGGGATGCGCGGGAAGAAAAAGCCCATAATGATGATGGTAACCAGCg          >  2:4761800/1‑93 (MQ=255)

                                                                                   tGTAGCTGGTTATGCCAATCCCCATCGCTACTTTTGCCGCCAGCGCCGGGATGCACGGGAAGAAAAAGCCCATAATGATGATGGTAACCAGCg          <  1:4647574/93‑1 (MQ=255)

                                                                                    gTAGCTGGTTATGCCAATCCCCATCGCTACTTTTGCCGCCAGCGCCGGGATGCGCGGGAAGAAAAAGCCCATAATGATGATGGTAACCAGCgg         <  1:7464456/93‑1 (MQ=255)

                                                                                    gTAGCTGGTTATGCCAATCCCCATCGCTACTTTTGCCGCCAGCGCCGGGATGCGCGGGAAGAAAAAGCCCATAATGATGATGGTAACCAGCgg         >  1:5275288/1‑93 (MQ=255)

                                                                                    gTAGCTGGTTATGCCAATCCCCATCGCTACTTTTGCCGCCAGCGCCGGGATGCGCGGGAAGAAAAAGCCCATAATGATGATGGTAACCAGCgg         >  2:2718753/1‑93 (MQ=255)

                                                                                    gTAGCTGATTATGCCAATCCCCATCGCTACTTTTGCCGCCAGCGCCGGAATGCGCGGGAAGAAAAAGCCCATAATGATGATGGTAACCAGCgg         <  1:7172135/93‑1 (MQ=255)

                                                                                     tAGCTGATTATGCCAATCCCCATCGCTACTTTTGCCGCCAGCGCCGGGATGCGCGGGAAGAAAAAGCCCATAATGATGATGGTAACCAGCGGc        <  2:3779420/93‑1 (MQ=255)

                                                                                      aGCTGGTTATGCCAATCCCCATCGCTACTTTTGCCGCCAGCGCCGGGATGCGCGGGAAGAAAAAGCCCATAATGATGATGGTAACCAGCGGCa       >  2:5752652/1‑93 (MQ=255)

                                                                                      aGCTGATTATGCCAATCCCCATCGCTACTTTTGCCGCCAGCGCCGGGATGCGCGGGAAGAAAAAGCCCATAATGATGATGGTAACCAGCGGCa       <  2:2508979/93‑1 (MQ=255)

                                                                                       gCTGGTTATGCCAATCCCCATCGCTACTTTTGCCGCCAGCGCCGGGATGCGCGGGAAGAAAAAGCCCATAATGATGATGGTAACCAGCGGCAc      >  1:363936/1‑93 (MQ=255)

                                                                                        cTGGTTATGCCAATCCCCATCGCTACTTTTGCCGCCAGCGCCGGGATGCGCGGGAAGAAAAAGCCCATAATGATGATGGTAACCAGCGGCACg     >  1:3835666/1‑93 (MQ=255)

                                                                                           aTTATGCCAATCCCCATCGCTACTTTTGCCGCCAGCGCCGGGATGCGCGGGAAGAAAAAGCCCATAATGATGATGGTAACCAGCGGCACGTTg  >  2:5407282/1‑93 (MQ=255)

CATCACGACCACGTTGATGCAGAACGTACAGGCCAGCACATAGAGGAAATGGAAGTCGAACTTCACCAGATAGTTGATGGTGATGTAGCTGATTATGCCAATCCCCATCGCTACTTTTGCCGCCAGCGCCGGGATGCGCGGGAAGAAAAAGCCCATAATGATGATGGTAACCAGCGGCACGTTG  >  NC_000913/3856319‑3856502

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`