BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,978,702	C→T	S68F (TCC→TTC)	yifK →	putative amino acid/amine transport protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,978,702	0	C	T	100.0%	2266.8 / NA	585	S68F (TCC→TTC)	yifK	putative amino acid/amine transport protein
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (291/294); total (291/294)

Only 100 of 597 total aligned reads displayed.

TGAAATGGGCCGGGCCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTCCCTCGAACCGGTTACCGGTTCGTTCGCCG‑TTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTACTGGT  >  NC_000913/3978612‑3978791

 gAAATGGGCCGGGCCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCt                                                                                         <  2:2228384/93‑1 (MQ=255)

 gAAATGGGCCGGGCCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCt                                                                                         <  1:3849184/93‑1 (MQ=255)

 gAAATGGGCCGGGCCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCt                                                                                         <  2:7202969/93‑1 (MQ=255)

  aaaTGGGCCGGGCCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTc                                                                                        >  1:4509686/1‑93 (MQ=255)

   aaTGGGCCGGGCCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCg                                                                                       >  2:5364201/1‑93 (MQ=255)

      gggccgggccATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAac                                                                                    <  2:320418/93‑1 (MQ=255)

      gggccgggccATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAac                                                                                    <  1:3455987/93‑1 (MQ=255)

      gggccgggccATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAac                                                                                    <  1:208316/93‑1 (MQ=255)

       ggccgggccATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAacc                                                                                   <  1:6534182/93‑1 (MQ=255)

       ggccgggccATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAacc                                                                                   >  1:1900060/1‑93 (MQ=255)

          cgggccATCAGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAaccggt                                                                                <  1:7513030/93‑1 (MQ=255)

            ggccATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAaccggtta                                                                              <  1:2668906/93‑1 (MQ=255)

            ggccATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAaccggtta                                                                              >  2:4482245/1‑93 (MQ=255)

               cATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAaccggttaccg                                                                           <  1:5647821/93‑1 (MQ=255)

               cATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAaccggttaccg                                                                           >  1:5134195/1‑93 (MQ=255)

               cATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAaccggttaccg                                                                           <  1:1163502/93‑1 (MQ=255)

                aTCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAaccggttaccgg                                                                          <  2:6191431/93‑1 (MQ=255)

                aTCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAaccggttaccgg                                                                          >  2:5260164/1‑93 (MQ=255)

                 tCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAaccggttaccggt                                                                         <  1:4366453/93‑1 (MQ=255)

                 tCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAaccggttaccggt                                                                         >  1:4249854/1‑93 (MQ=255)

                 tCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAaccggttaccggt                                                                         >  2:7053294/1‑93 (MQ=255)

                 tCCGTATTGTTGGCCCATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAaccggttaccggt                                                                         >  1:3056934/1‑93 (MQ=255)

                   cGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGgttc                                                                       <  1:5978132/93‑1 (MQ=255)

                   cGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGgttc                                                                       <  2:6902578/93‑1 (MQ=255)

                    gTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGgttcg                                                                      >  1:41397/1‑93 (MQ=255)

                    gTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGgttcg                                                                      >  2:1119923/1‑93 (MQ=255)

                     tATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGgttcgt                                                                     <  2:1655580/93‑1 (MQ=255)

                      aTTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGgttcgtt                                                                    >  1:1055869/1‑93 (MQ=255)

                       ttgttgGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGgttcgttc                                                                   >  2:2736564/1‑93 (MQ=255)

                       ttgttgGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGgttcgttc                                                                   <  2:6110959/93‑1 (MQ=255)

                         gttgGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGc                                                                 >  1:5388695/1‑93 (MQ=255)

                          ttgGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGcc                                                                <  2:2869027/93‑1 (MQ=255)

                            ggCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCG‑t                                                             >  1:6391157/1‑93 (MQ=255)

                             gCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCG‑tt                                                            >  2:4279051/1‑93 (MQ=255)

                               cTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCG‑TTTa                                                          <  1:7055365/93‑1 (MQ=255)

                                tataTCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCG‑TTTAt                                                         >  2:7353586/1‑93 (MQ=255)

                                 atatCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCG‑TTTATg                                                        <  2:3120508/93‑1 (MQ=255)

                                 atatCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCG‑TTTATg                                                        <  2:411400/93‑1 (MQ=255)

                                 atatCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCG‑TTTATg                                                        >  1:5241160/1‑93 (MQ=255)

                                 atatCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCG‑TTTATg                                                        <  2:1566579/93‑1 (MQ=255)

                                  tatCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCG‑TTTATgc                                                       <  1:2210958/93‑1 (MQ=255)

                                     catcGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCG‑TTTATGCGCa                                                    <  2:2967236/93‑1 (MQ=255)

                                     catcGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCG‑TTTATGCGCa                                                    <  1:844239/93‑1 (MQ=255)

                                     catcGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCG‑TTTATGCGCa                                                    <  1:3557446/93‑1 (MQ=255)

                                      atcGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCG‑TTTATGCGCAt                                                   >  2:6417896/1‑93 (MQ=255)

                                      atcGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCG‑TTTATGCGCAt                                                   >  2:4547607/1‑93 (MQ=255)

                                       tcGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCG‑TTTATGCGCATc                                                  >  1:3144972/1‑93 (MQ=255)

                                        cGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCG‑TTTATGCGCATCg                                                 <  1:3250426/93‑1 (MQ=255)

                                        cGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCG‑TTTATGCGCATCg                                                 <  1:100702/93‑1 (MQ=255)

                                           cGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCG‑TTTATGCGCATCGTta                                              <  2:5929081/93‑1 (MQ=255)

                                           cGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCG‑TTTATGCGCATCGTta                                              <  2:2678588/93‑1 (MQ=255)

                                            gggCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCG‑TTTATGCGCATCGTtat                                             >  1:3672315/1‑93 (MQ=255)

                                            gggCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCG‑TTTATGCGCATCGTtat                                             >  1:4799615/1‑93 (MQ=255)

                                             ggCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCG‑TTTATGCGCATCGTtata                                            >  2:3403360/1‑93 (MQ=255)

                                             ggCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCG‑TTTATGCGCATCGTtata                                            >  1:7245338/1‑93 (MQ=255)

                                             ggCTGTTCGTCTTTTTCATCATGCGTTCAATGGCCGAATTGTTTTTCCTCAAACGGGTTCCCGGTTTGTT‑GCCGTTTTATGCGCATCGtcttt                                            >  2:6559419/1‑89 (MQ=255)

                                               cTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCG‑TTTATGCGCATCGTTATATg                                          >  1:5577505/1‑93 (MQ=255)

                                               cTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCG‑TTTATGCGCATCGTTATATg                                          >  1:2837705/1‑93 (MQ=255)

                                                tGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCG‑TTTATGCGCATCGTTATATGa                                         >  2:1312763/1‑93 (MQ=255)

                                                tGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCG‑TTTATGCGCATCGTTATATGa                                         >  1:6336369/1‑93 (MQ=255)

                                                tGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCG‑TTTATGCGCATCGTTATATGa                                         >  2:894711/1‑93 (MQ=255)

                                                 gTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCG‑TTTATGCGCATCGTTATATGAg                                        >  2:5456514/1‑93 (MQ=255)

                                                  ttCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGGTCGTTCGCCG‑TTTATGCGCATCGTTATATGAGc                                       >  2:4843256/1‑93 (MQ=255)

                                                    cGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCG‑TTTATGCGCATCGTTATATGAGccc                                     <  2:5554693/93‑1 (MQ=255)

                                                        tttttCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCG‑TTTATGCGCATCGTTATATGAGCCCGTTc                                 <  1:2297708/93‑1 (MQ=255)

                                                         ttttCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCG‑TTTATGCGCATCGTTATATGAGCCCGTTCt                                <  1:2429060/93‑1 (MQ=255)

                                                         ttttCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCG‑TTTATGCGCATCGTTATATGAGCCCGTTCt                                <  2:6858696/93‑1 (MQ=255)

                                                          tttCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCG‑TTTATGCGCATCGTTATATGAGCCCGTTCtt                               <  1:4544162/93‑1 (MQ=255)

                                                          tttCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCG‑TTTATGCGCATCGTTATATGAGCCCGTTCtt                               <  1:1316552/93‑1 (MQ=255)

                                                           ttCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCG‑TTTATGCGCATCGTTATATGAGCCCGTTCttt                              <  1:6886121/93‑1 (MQ=255)

                                                           ttCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCG‑TTTATGCGCATCGTTATATGAGCCCGTTCttt                              <  1:6196629/93‑1 (MQ=255)

                                                            tcatcaTGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCG‑TTTATGCGCATCGTTATATGAGCCCGTTCTTTg                             <  1:7354113/93‑1 (MQ=255)

                                                            tcatcaTGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCG‑TTTATGCGCATCGTTATATGAGCCCGTTCTTTg                             <  2:2543752/93‑1 (MQ=255)

                                                            tcatcaTGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCG‑TTTATGCGCATCGTTATATGAGCCCGTTCTTTg                             <  1:1512852/93‑1 (MQ=255)

                                                             catcatGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCG‑TTTATGCGCATCGTTATATGAGCCCGTTCTTTgg                            <  2:2810446/93‑1 (MQ=255)

                                                                catGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCG‑TTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTa                         <  2:3597729/93‑1 (MQ=255)

                                                                  tGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCG‑TTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTAtc                       <  2:2335071/93‑1 (MQ=255)

                                                                  tGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCG‑TTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTAtc                       >  2:6326557/1‑93 (MQ=255)

                                                                  tGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCG‑TTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTAtc                       <  1:5804218/93‑1 (MQ=255)

                                                                    cGTGCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCG‑TTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTAtctc                     >  1:6973716/1‑93 (MQ=255)

                                                                       tCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCG‑TTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCAcc                  <  1:1622791/93‑1 (MQ=255)

                                                                        cAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCG‑TTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCg                 >  2:7516372/1‑93 (MQ=255)

                                                                           tGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCG‑TTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCt              >  1:2529397/1‑93 (MQ=255)

                                                                            gggCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCG‑TTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTg             <  2:497703/93‑1 (MQ=255)

                                                                            gggCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCG‑TTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTg             >  1:1751173/1‑93 (MQ=255)

                                                                            gggCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCG‑TTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTg             <  2:10139/93‑1 (MQ=255)

                                                                                gAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCG‑TTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCt         <  2:1910546/93‑1 (MQ=255)

                                                                                gAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCG‑TTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCt         <  1:1491706/93‑1 (MQ=255)

                                                                                gAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCG‑TTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCt         >  2:6727358/1‑93 (MQ=255)

                                                                                 aaaTGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCG‑TTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCtt        >  2:1204220/1‑93 (MQ=255)

                                                                                  aaTGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCG‑TTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTa       <  2:1422772/93‑1 (MQ=255)

                                                                                   aTGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCG‑TTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTAc      <  2:5712076/93‑1 (MQ=255)

                                                                                   aTGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCG‑TTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTAc      <  2:2061952/93‑1 (MQ=255)

                                                                                   aTGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCG‑TTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTAc      <  1:4107700/93‑1 (MQ=255)

                                                                                    tgttgtTCTTCGAACCGGTTACCGGTTCGTTCGCCG‑TTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTACt     >  1:672101/1‑93 (MQ=255)

                                                                                    tgttgtTCCTCGAACCGGTTACCGGTTCGTTCGCCG‑TTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTACt     >  2:5815276/1‑93 (MQ=255)

                                                                                    tgttgtTCCTCGAACCGGTTACCGGTTCGTTCGCCG‑TTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTACt     <  2:4692408/93‑1 (MQ=255)

                                                                                    tgttgtTCCTCGAACCGGTTACCGGTTCGTTCGCCG‑TTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTACt     <  2:374307/93‑1 (MQ=255)

                                                                                     gttgttCCTCGAACCGGTTACCGGTTCGTTCGCCG‑TTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTACTg    <  1:5055532/93‑1 (MQ=255)

                                                                                       tgtTCCTCGAACCGGTTACCGGTTCGTTCGCCG‑TTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCCCCGCCTGGTCTTACTGGt  <  1:4671963/93‑1 (MQ=255)

TGAAATGGGCCGGGCCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTCCCTCGAACCGGTTACCGGTTCGTTCGCCG‑TTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTACTGGT  >  NC_000913/3978612‑3978791

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`