BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,133,793	A→G	I36V (ATC→GTC)	b3943 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,133,793	0	A	G	85.9%	705.7 / 104.2	297	I36V (ATC→GTC)	b3943	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (23/19); new base G (116/139); total (139/158)
Fisher's exact test for biased strand distribution p-value = 3.17e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.71e-01

Only 100 of 298 total aligned reads displayed.

AAGAGCAACCCACTGGCAATCAGTGGCCTGGTTGTGCTCACACTTATCTGGAGTTATAGCTGGATTTTCATGAAGCAAGTCACCAGTTACATCGGTGCCTTCGACTTTACCGCCTTACGCTGCATTTTCGGCGCTCTCGTTTTATTCATCGTCCTTTTATTACGTGGTCGCGGAATGCGCCCG  >  NC_000913/4133703‑4133885

aaGAGCAACCCACTGGCAATCAGTGGCCTGGTTGTGCTCACACTTATCTGGAGTTATAGCTGGATTTTCATGAAGCAAGTCACCAGTTACGTc                                                                                            <  2:4563607/93‑1 (MQ=255)

aaGAGCAACCCACTGGCAATCAGTGGCCTGGTTGTGCTCACACTTATCTGGAGTTATAGCTGGATTTTCATGAAGCAAGTCACCAGTTACGTc                                                                                            >  1:439471/1‑93 (MQ=255)

aaGAGCAACCCACTGGCAATCAGTGGCCTGGTTGTGCTCACACTTATCTGGAGTTATAGCTGGATTTTCATGAAGCAAGTCACCAGTTACATc                                                                                            <  1:3330285/93‑1 (MQ=255)

 agagCAACCCACTGGCAATCAGTGGCCTGGTTGTGCTCACACTTATCTGGAGTTATAGCTGGATTTTCATGAAGCAAGTCACCAGTTACGTCg                                                                                           >  1:4796353/1‑93 (MQ=255)

  gagCAACCCACTGGCAATCAGTGGCCTGGTTGTGCTCACACTTATCTGGAGTTATAGCTGGATTTTCATGAAGCAAGTCACCAGTTACGTCgg                                                                                          <  1:4178831/93‑1 (MQ=255)

     cAACCCACTGGCAATCAGTGGCCTGGTTGTGCTCACACTTATCTGGAGTTATAGCTGGATTTTCATGAAGCAAGTCACCAGTTACGTCGGTGc                                                                                       <  1:2044042/93‑1 (MQ=255)

      aaCCCACTGGCAATCAGTGGCCTGGTTGTGCTCACACTTATCTGGAGTTATAGCTGGATTTTCATGAAGCAAGTCACCAGTTACGTCGGTGcc                                                                                      >  1:2563330/1‑93 (MQ=255)

      aaCCCACTGGCAATCAGTGGCCTGGTTGTGCTCACACTTATCTGGAGTTATAGCTGGATTTTCATGAAGCAAGTCACCAGTTACATCGGTGcc                                                                                      >  2:1131958/1‑93 (MQ=255)

       aCCCACTGGCAATCAGTGGCCTGGTTGTGCTCACACTTATCTGGAGTTATAGCTGGATTTTCATGAAGCAAGTCACCAGTTACGTCGGTGCCt                                                                                     <  1:3889179/93‑1 (MQ=255)

       aCCCACTGGCAATCAGTGGCCTGGTTGTGCTCACACTTATCTGGAGTTATAGCTGGATTTTCATGAAGCAAGTCACCAGTTACGTCGGTGCCt                                                                                     >  2:2339592/1‑93 (MQ=255)

       aCCCACTGGCAATCAGTGGCCTGGTTGTGCTCACACTTATCTGGAGTTATAGCTGGATTTTCATGAAGCAAGTCACCAGTTACGTCGGTGCCt                                                                                     <  1:7073735/93‑1 (MQ=255)

        cccACTGGCAATCAGTGGCCTGGTTGTGCTCACACTTATCTGGAGTTATAGCTGGATTTTCATGAAGCAAGTCACCAGTTACGTCGGTGCCtt                                                                                    >  1:1033624/1‑93 (MQ=255)

         ccACTGGCAATCAGTGGCCTGGTTGTGCTCACACTTATCTGGAGTTATAGCTGGATTTTCATGAAGCAAGTCACCAGTTACGTCGGTGCCTTc                                                                                   <  1:972241/93‑1 (MQ=255)

         ccACTGGCAATCAGTGGCCTGGTCGTGCTCACACTTATCTGGAGTTATAGCTGGATTTTCATGAAGCAAGTCACCAGTTACATCGGTGCCTTc                                                                                   >  1:167520/1‑93 (MQ=255)

          cACTGGCAATCAGTGGCCTGGTTGTGCTCACACTTATCTGGAGTTATAGCTGGATTTTCATGAAGCAAGTCACCAGTTACGTCGGTGCCTTCg                                                                                  <  1:598586/93‑1 (MQ=255)

          cACTGGCAATCAGTGGCCTGGTTGTGCTCACACTTATCTGGAGTTATAGCTGGATTTTCATGAAGCAAGTCACCAGTTACGTCGGTGCCTTCg                                                                                  <  1:5458231/93‑1 (MQ=255)

          cACTGGCAATCAGTGGCCTGGTTGTGCTCACACTTATCTGGAGTTATAGCTGGATTTTCATGAAGCAAGTCACCAGTTACGTCGGTGCCTTCg                                                                                  >  1:4138379/1‑93 (MQ=255)

           aCTGGCAATCAGTGGCCTGGTTGTGCTCACACTTATCTGGAGTTATAGCTGGATTTTCATGAAGCAAGTCACCAGTTACGTCGGTGCCTTCGa                                                                                 >  2:548561/1‑93 (MQ=255)

            cTGGCAATCAGTGGCCTGGTTGTGCTCACACTTATCTGGAGTTATAGCTGGATTTTCATGAAGCAAGTCACCAGTTACGTCGGTGCCTTCGAc                                                                                <  1:6797372/93‑1 (MQ=255)

            cTGGCAATCAGTGGCCTGGTTGTGCTCACACTTATCTGGAGTTATAGCTGGATTTTCATGAAGCAAGTCACCAGTTACGTCGGTGCCTTCGAc                                                                                <  1:1073016/93‑1 (MQ=255)

               gCAATCAGTGGCCTGGTTGTGCTCACACTTATCTGGAGTTATAGCTGGATTTTCATGAAGCAAGTCACCAGTTACGTCGGTGCCTTCGACttt                                                                             >  2:4408431/1‑93 (MQ=255)

                  aTCAGTGGCCTGGTTGTGCTCACACTTATCTGGAGTTATAGCTGGATTTTCATGAAGCAAGTCACCAGTTACGTCGGTGCCTTCGACTTTAcc                                                                          <  1:2281493/93‑1 (MQ=255)

                  aTCAGTGGCCTGGTTGTGCTCACACTTATCTGGAGTTATAGCTGGATTTTCATGAAGCAAGTCACCAGTTACGTCGGTGCCTTCGACTTTAcc                                                                          >  1:775321/1‑93 (MQ=255)

                   tCAGTGGCCTGGTTGTGCTCACACTTATCTGGAGTTATAGCTGGATTTTCATGAAGCAAGTCACCAGTTACGTCGGTGCCTTCGACTTTACCg                                                                         >  2:1522445/1‑93 (MQ=255)

                    cAGTGGCCTGGTTGTGCTCACACTTATCTGGAGTTATAGCTGGATTTTCATGAAGCAAGTCACCAGTTACGTCGGTGCCTTCGACTTTACCGc                                                                        >  2:1689713/1‑93 (MQ=255)

                    cAGTGGCCTGGTTGTGCTCACACTTATCTGGAGTTATAGCTGGATTTTCATGAAGCAAGTCACCAGTTACGTCGGTGCCTTCGACTTTACCGc                                                                        <  2:1013159/93‑1 (MQ=255)

                     aGTGGCCTGGTTGTGCTCACACTTATCTGGAGTTATAGCTGGATTTTCATGAAGCAAGTCACCAGTTACGTCGGTGCCTTCGACTTTACCGcc                                                                       <  1:6482100/93‑1 (MQ=255)

                      gTGGCCTGGTTGTGCTCACACTTATCTGGAGTTATAGCTGGATTTTCATGAAGCAAGTCACCAGTTACGTCGGTGCCTTCGACTTTACCGCCt                                                                      <  2:2838319/93‑1 (MQ=255)

                         gCCTGGTTGTGCTCACACTTATCTGGAGTTATAGCTGGATTTTCATGAAGCAAGTCACCAGTTACGTCGGTGCCTTCGACTTTACCGCCTTAc                                                                   >  1:6882521/1‑93 (MQ=255)

                         gCCTGGTTGTGCTCACACTTATCTGGAGTTATAGCTGGATTTTCATGAAGCAAGTCACCAGTTACGTCGGTGCCTTCGACTTTACCGCCTTAc                                                                   <  1:5374747/93‑1 (MQ=255)

                           cTGGTTGTGCTCACACTTATCTGGAGTTATAGCTGGATTTTCATGAAGCAAGTCACCAGTTACATCGGTGCCTTCGACTTTACCGCCTTACGc                                                                 <  2:3725045/93‑1 (MQ=255)

                            tGGTTGTGCTCACACTTATCTGGAGTTATAGCTGGATTTTCATGAAGCAAGTCACCAGTTACATCGGTGCCTTCGACTTTACCGCCTTACGCt                                                                <  2:4017661/93‑1 (MQ=255)

                              gTTGTGCTCACACTTATCTGGAGTTATAGCTGGATTTTCATGAAGCAAGTCACCAGTTACGTCGGTGCCTTCGACTTTACCGCCTTACGCTGc                                                              <  2:6851646/93‑1 (MQ=255)

                              gTTGTGCTCACACTTATCTGGAGTTATAGCTGGATTTTCATGAAGCAAGTCACCAGTTACGTCGGTGCCTTCGACTTTACCGCCTTACGCTGc                                                              >  2:4145642/1‑93 (MQ=255)

                               ttGTGCTCACACTTATCTGGAGTTATAGCTGGATTTTCATGAAGCAAGTCACCAGTTACGTCGGTGCCTTCGACTTTACCGCCTTACGCTGCa                                                             <  1:6266143/93‑1 (MQ=255)

                                tgtgCTCACACTTATCTGGAGTTATAGCTGGATTTTCATGAAGCAAGTCACCAGTTACGTCGGTGCCTTCGACTTTACCGCCTTACGCTGCAt                                                            >  2:7228257/1‑93 (MQ=255)

                                 gtgCTCACACTTATCTGGAGTTATAGCTGGATTTTCATGAAGCAAGTCACCAGTTACGTCGGTGCCTTCGACTTTACCGCCTTACGCTGCAtt                                                           <  2:908105/93‑1 (MQ=255)

                                 gtgCTCACACTTATCTGGAGTTATAGCTGGATTTTCATGAAGCAAGTCACCAGTTACGTCGGTGCCTTCGACTTTACCGCCTTACGCTGCAtt                                                           <  1:3632105/93‑1 (MQ=255)

                                  tgCTCACACTTATCTGGAGTTATAGCTGGATTTTCATGAAGCAAGTCACCAGTTACGTCGGTGCCTTCGACTTTACCGCCTTACGCTGCAttt                                                          >  1:2164450/1‑93 (MQ=255)

                                   gCTCACACTTATCTGGAGTTATAGCTGGATTTTCATGAAGCAAGTCACCAGTTACGTCGGTGCCTTCGACTTTACCGCCTTACGCTGCAtttt                                                         >  2:6166372/1‑93 (MQ=255)

                                   gCTCACACTTATCTGGAGTTATAGCTGGATTTTCATGAAGCAAGTCACCAGTTACGTCGGTGCCTTCGACTTTACCGCCTTACGCTGCAtttt                                                         >  2:2104000/1‑93 (MQ=255)

                                    cTCACACTTATCTGGAGTTATAGCTGGATTTTCATGAAGCAAGTCACCAGTTACGTCGGTGCCTTCGACTTTACCGCCTTACGCTGCATTTTc                                                        >  1:1598122/1‑93 (MQ=255)

                                    cTCACACTTATCTGGAGTTATAGCTGGATTTTCATGAAGCAAGTCACCAGTTACATCGGTGCCTTCGACTTTACCGCCTTACGCTGCATTTTc                                                        <  2:5944221/93‑1 (MQ=255)

                                     tCACACTTATCTGGAGTTATAGCTGGATTTTCATGAAGCAAGTCACCAGTTACGTCGGTGCCTTCGACTTTACCGCCTTACGCTGCATTTTCg                                                       <  1:143768/93‑1 (MQ=255)

                                     tCACACTTATCTGGAGTTATAGCTGGATTTTCATGAAGCAAGTCACCAGTTACGTCGGTGCCTTCGACTTTACCGCCTTACGCTGCATTTTCg                                                       >  2:306456/1‑93 (MQ=255)

                                     tCACACTTATCTGGAGTTATAGCTGGATTTTCATGAAGCAAGTCACCAGTTACGTCGGTGCCTTCGACTTTACCGCCTTACGCTGCATTTTCg                                                       <  1:5025006/93‑1 (MQ=255)

                                        cacTTATCTGGAGTTATAGCTGGATTTTCATGAAGCAAGTCACCAGTTACGTCGGTGCCTTCGACTTTACCGCCTTACGCTGCATTTTCGgcg                                                    >  1:4574428/1‑93 (MQ=255)

                                          cTTATCTGGAGTTATAGCTGGATTTTCATGAAGCAAGTCACCAGTTACGTCGGTGCCTTCGACTTTACCGCCTTACGCTGCATTTTCGGCGct                                                  >  1:5287420/1‑93 (MQ=255)

                                           ttATCTGGAGTTATAGCTGGATTTTCATGAAGCAAGTCACCAGTTACGTCGGTGCCTTCGACTTTACCGCCTTACGCTGCATTTTCGGCGctc                                                 <  2:1453275/93‑1 (MQ=255)

                                           ttATCTGGAGTTATAGCTGGATTTTCATGAAGCAAGTCACCAGTTACGTCGGTGCCTTCGACTTTACCGCCTTACGCTGCATTTTCGGCGctc                                                 >  2:6753904/1‑93 (MQ=255)

                                           ttATCTGGAGTTATAGCTGGATTTTCATGAAGCAAGTCACCAGTTACGTCGGTGCCTTCGACTTTACCGCCTTACGCTGCATTTTCGGCGctc                                                 <  1:1849216/93‑1 (MQ=255)

                                             aTCTGGAGTTATAGCTGGATTTTCATGAAGCAAGTCACCAGTTACGTCGGTGCCTTCGACTTTACCGCCTTACGCTGCATTTTCGGCGCtctc                                               <  2:4772449/93‑1 (MQ=255)

                                              tCTGGAGTTATAGCTGGATTTTCATGAAGCAAGTCACCAGTTACGTCGGTGCCTTCGACTTTACCGCCTTACGCTGCATTTTCGGCGCTCTCg                                              >  2:6594123/1‑93 (MQ=255)

                                               cTGGAGTTATAGCTGGATTTTCATGAAGCAAGTCACCAGTTACGTCGGTGCCTTCGACTTTACCGCCTTACGCTGCATTTTCGGCGCTCTCGt                                             <  2:4333133/93‑1 (MQ=255)

                                                 ggAGTTATAGCTGGATTTTCATGAAGCAAGTCACCAGTTACGTCGGTGCCTTCGACTTTACCGCCTTACGCTGCATTTTCGGCGCTCTCGttt                                           >  1:398870/1‑93 (MQ=255)

                                                   aGTTATAGCTGGATTTTCATGAAGCAAGTCACCAGTTACGTCGGTGCCTTCGACTTTACCGCCTTACGCTGCATTTTCGGCGCTCTCGTTTTa                                         <  2:2484945/93‑1 (MQ=255)

                                                    gTTATAGCTGGATTTTCATGAAGCAAGTCACCAGTTACATCGGTGCCTTCGACTTTACCGCCTTACGCTGCATTTTCGGCGCTCTCGTTTTAt                                        <  2:3275770/93‑1 (MQ=255)

                                                     ttATAGCTGGATTTTCATGAAGCAAGTCACCAGTTACGTCGGTGCCTTCGACTTTACCGCCTTACGCTGCATTTTCGGCGCTCTCGTTTTAtt                                       >  1:3092639/1‑93 (MQ=255)

                                                     ttATAGCTGGATTTTCATGAAGCAAGTCACCAGTTACGTCGGTGCCTTCGACTTTACCGCCTTACGCTGCATTTTCGGCGCTCTCGTTTTAtt                                       <  1:2664076/93‑1 (MQ=255)

                                                       ataGCTGGATTTTCATGAAGCAAGTCACCAGTTACGTCGGTGCCTTCGACTTTACCGCCTTACGCTGCATTTTCGGCGCTCTCGTTTTATTCa                                     <  1:1907627/93‑1 (MQ=255)

                                                         aGCTGGATTTTCATGAAGCAAGTCACCAGTTACGTCGGTGCCTTCGACTTTACCGCCTTACGCTGCATTTTCGGCGCTCTCGTTTTATTCATc                                   <  2:5285842/93‑1 (MQ=255)

                                                             ggATTTTCATGAAGCAAGTCACCAGTTACGTCGGTGCCTTCGACTTTACCGCCTTACGCTGCATTTTCGGCGCTCTCGTTTTATTCATCGTcc                               <  2:6277713/93‑1 (MQ=255)

                                                              gATTTTCATGAAGCAAGTCACCAGTTACGTCGGTGCCTTCGACTTTACCGCCTTACGCTGCATTTTCGGCGCTCTCGTTTTATTCATCGTCCt                              >  2:3612207/1‑93 (MQ=255)

                                                               aTTTTCATGAAGCAAGTCACCAGTTACGTCGGTGCCTTCGACTTTACCGCCTTACGCTGCATTTTCGGCGCTCTCGTTTTATTCATCGTCCtt                             >  2:1265591/1‑93 (MQ=255)

                                                               aTTTTCATGAAGCAAGTCACCAGTTACGTCGGTGCCTTCGACTTTACCGCCTTACGCTGCATTTTCGGCGCTCTCGTTTTATTCATCGTCCtt                             <  1:5211703/93‑1 (MQ=255)

                                                                ttttCATGAAGCAAGTCACCAGTTACGTCGGTGCCTTCGACTTTACCGCCTTACGCTGCATTTTCGGCGCTCTCGTTTTATTCATCGTCCttt                            <  2:5354633/93‑1 (MQ=255)

                                                                ttttCATGAAGCAAGTCACCAGTTACGTCGGTGCCTTCGACTTTACCGCCTTACGCTGCATTTTCGGCGCTCTCGTTTTATTCATCGTCCttt                            <  2:7528416/93‑1 (MQ=255)

                                                                  ttCATGAAGCAAGTCACCAGTTACGTCGGTGCCTTCGACTTTACCGCCTTACGCTGCATTTTCGGCGCTCTCGTTTTATTCATCGTCCTTtta                          <  2:262938/93‑1 (MQ=255)

                                                                  ttCATGAAGCAAGTCACCAGTTACGTCGGTGCCTTCGACTTTACCGCCTTACGCTGCATTTTCGGCGCTCTCGTTTTATTCATCGTCCTTtta                          <  1:5584926/93‑1 (MQ=255)

                                                                  ttCATGAAGCAAGTCACCAGTTACATCGGTGCCTTCGACTTTACCGCCTTACGCTGCATTTTCGGCGCTCTCGTTTTATTCATCGTCCTTtta                          >  1:5908423/1‑93 (MQ=255)

                                                                  tcaaTGAAGCAAGTCACCAGTTACGTCGGTGCCTTCGACTTTACCGCCTTACGCTGCATTTTCGGCGCTCTCGTTTTATTCATCGTCCTTtta                          <  1:2416249/90‑1 (MQ=255)

                                                                   tCATGAAGCAAGTCACCAGTTACATCGGTGCCTTCGACTTTACCGCCTTACGCTGCATTTTCGGCGCTCTCGTTTTATTCATCGTCCTTttat                         >  2:7162986/1‑93 (MQ=255)

                                                                    cATGAAGCAAGTCACCAGTTACGTCGGTGCCTTCGACTTTACCGCCTTACGCTGCATTTTCGGCGCTCTCGTTTTATTCATCGTCCTTttatt                        >  2:6461314/1‑93 (MQ=255)

                                                                     aTGAAGCAAGTCACCAGTTACGTCGGTGCCTTCGACTTTACCGCCTTACGCTGCATTTTCGGCGCTCTCGTTTTATTCATCGTCCTTttatta                       >  1:3188425/1‑93 (MQ=255)

                                                                     aTGAAGCAAGTCACCAGTTACGTCGGTGCCTTCGACTTTACCGCCTTACGCTGCATTTTCGGCGCTCTCGTTTTATTCATCGTCCTTttatta                       <  2:783635/93‑1 (MQ=255)

                                                                     aTGAAGCAAGTCACCAGTTACATCGGTGCCTTCGACTTTACCGCCTTACGCTGCATTTTCGGCGCTCTCGTTTTATTCATCGTCCTTttatta                       >  2:4196753/1‑93 (MQ=255)

                                                                      tGAAGCAAGTCACCAGTTACGTCGGTGCCTTCGACTTTACCGCCTTACGCTGCATTTTCGGCGCTCTCGTTTTATTCATCGTCCTTTTATTAc                      <  1:4310655/93‑1 (MQ=255)

                                                                      tGAAGCAAGTCACCAGTTACGTCGGTGCCTTCGACTTTACCGCCTTACGCTGCATTTTCGGCGCTCTCGTTTTATTCATCGTCCTTTTATTAc                      <  1:5724618/93‑1 (MQ=255)

                                                                      tGAAGCAAGTCACCAGTTACGTCGGTGCCTTCGACTTTACCGCCTTACGCTGCATTTTCGGCGCTCTCGTTTTATTCATCGTCCTTTTATTAc                      <  2:7032127/93‑1 (MQ=255)

                                                                      tGAAGCAAGTCACCAGTTACGTCGGTGCCTTCGACTTTACCGCCTTACGCTGCATTTTCGGCGCTCTCGTTTTATTCATCGTCCTTTTATTAc                      >  2:3911092/1‑93 (MQ=255)

                                                                       gAAGCAAGTCACCAGTTACGTCGGTGCCTTCGACTTTACCGCCTTACGCTGCATTTTCGGCGCTCTCGTTTTATTCATCGTCCTTTTATTACg                     <  2:5403901/93‑1 (MQ=255)

                                                                       gAAGCAAGTCACCAGTTACGTCGGTGCCTTCGACTTTACCGCCTTACGCTGCATTTTCGGCGCTCTCGTTTTATTCATCGTCCTTTTATTACg                     >  2:7341918/1‑93 (MQ=255)

                                                                       gAAGCAAGTCACCAGTTACATCGGTGCCTTCGACTTTACCGCCTTACGCTGCATTTTCGGCGCTCTCGTTTTATTCATCGTCCTTTTATTACg                     >  2:1816056/1‑93 (MQ=255)

                                                                        aaGCAAGTCACCAGTTACGTCGGTGCCTTCGACTTTACCGCCTTACGCTGCATTTTCGGCGCTCTCGTTTTATTCATCGTCCTTTTATTACGt                    <  1:3256358/93‑1 (MQ=255)

                                                                          gCAAGTCACCAGTTACGTCGGTGCCTTCGACTTTACCGCCTTACGCTGCATTTTCGGCGCTCTCGTTTTATTCATCGTCCTTTTATTACGTgg                  >  2:2937169/1‑93 (MQ=255)

                                                                          gCAAGTCACCAGTTACGTCGGTGCCTTCGACTTTACCGCCTTACGCTGCATTTTCGGCGCTCTCGTTTTATTCATCGTCCTTTTATTACGTgg                  >  2:3360544/1‑93 (MQ=255)

                                                                           cAAGTCACCAGTTACGTCGGTGCCTTCGACTTTACCGCCTTACGCTGCATTTTCGGCGCTCTCGTTTTATTCATCGTCCTTTTATTACGTGGt                 <  1:2984225/93‑1 (MQ=255)

                                                                           cAAGTCACCAGTTACATCGGTGCCTTCGACTTTACCGCCTTACGCTGCATTTTCGGCGCTCTCGTTTTATTCATCGTCCTTTTATTACGTGGt                 <  2:5859902/93‑1 (MQ=255)

                                                                            aaGTCACCAGTTACGTCGGTGCCTTCGACTTTACCGCCTTACGCTGCATTTTCGGCGCTCTCGTTTTATTCATCGTCCTTTTATTACGTGGTc                <  1:6124353/93‑1 (MQ=255)

                                                                            aaGTCACCAGTTACGTCGGTGCCTTCGACTTTACCGCCTTACGCTGCATTTTCGGCGCTCTCGTTTTATTCATCGTCCTTTTATTACGTGGTc                <  1:3425906/93‑1 (MQ=255)

                                                                            aaGTCACCAGTTACGTCGGTGCCTTCGACTTTACCGCCTTACGCTGCATTTTCGGCGCTCTCGTTTTATTCATCGTCCTTTTATTACGTGGTc                <  1:6834526/93‑1 (MQ=255)

                                                                             aGTCACCAGTTACGTCGGTGCCTTCGACTTTACCGCCTTACGCTGCATTTTCGGCGCTCTCGTTTTATTCATCGTCCTTTTATTACGTGGtag               >  2:6547762/1‑91 (MQ=255)

                                                                              gTCACCAGTTACGACGGTGCCTTCGACTTTACCGCCTTACGCTGCATTTTCGGCGCTCTCGTTTTATTCATCGTCCTTTTATTACGTGGTcgc              <  2:5793362/93‑1 (MQ=255)

                                                                                  ccAGTTACATCGGTGCCTTCGACTTTACCGCCTTACGCTGCATTTTCGGCGCTCTCGTTTTATTCATCGTCCTTTTATCACGTGGTCGCGGaa          <  1:7492386/93‑1 (MQ=255)

                                                                                    aGTTACGTCGGTGCCTTCGACTTTACCGCCTTACGCTGCATTTTCGGCGCTCTCGTTTTATTCATCGTCCTTTTATTACGTGGTCGCGGAATg        <  1:2829729/93‑1 (MQ=255)

                                                                                    aGTTACGTCGGTGCCTTCGACTTTACCGCCTTACGCTGCATTTTCGGCGCTCTCGTTTTATTCATCGTCCTTTTATTACGTGGTCGCGGAATg        >  2:3408614/1‑93 (MQ=255)

                                                                                    aGTTACGTCGGTGCCTTCGACTTTACCGCCTTACGCTGCATTTTCGGCGCTCTCGTTTTATTCATCGTCCTTTTATTACGTGGTCGCGGAATg        <  2:3525399/93‑1 (MQ=255)

                                                                                     gTTACGTCGGTGCCTTCGACTTTACCGCCTTACGCTGCATTTTCGGCGCTCTCGTTTTATTCATCGTCCTTTTATTACGTGGTCGCGGAATgc       <  1:3766156/93‑1 (MQ=255)

                                                                                     gTTACGTCGGTGCCTTCGACTTTACCGCCTTACGCTGCATTTTCGGCGCTCTCGTTTTATTCATCGTCCTTTTATTACGTGGTCGCGGAATgc       <  1:1323345/93‑1 (MQ=255)

                                                                                     gTTACATCGGTGCCTTCGACTTTACCGCCTTACGCTGCATTTTCGGCGCTCTCGTTTTATTCATCGTCCTTTTATTACGTGGTCGCGGAATgc       >  1:6625874/1‑93 (MQ=255)

AAGAGCAACCCACTGGCAATCAGTGGCCTGGTTGTGCTCACACTTATCTGGAGTTATAGCTGGATTTTCATGAAGCAAGTCACCAGTTACATCGGTGCCTTCGACTTTACCGCCTTACGCTGCATTTTCGGCGCTCTCGTTTTATTCATCGTCCTTTTATTACGTGGTCGCGGAATGCGCCCG  >  NC_000913/4133703‑4133885

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`