| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,182,169 | A→G | H1116R (CAC→CGC) | rpoB → | RNA polymerase beta subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,182,169 | 0 | A | G | 99.7% | 947.5 / ‑4.8 | 286 | H1116R (CAC→CGC) | rpoB | RNA polymerase beta subunit |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (150/134); total (152/134) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.35e-01 | |||||||||||
Only 100 of 286 total aligned reads displayed.
CTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCCGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAAC‑CCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCC > NC_000913/4182079‑4182258 | cTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCCGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAAC‑CCGcc > 1:2226703/1‑93 (MQ=255)cTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCCGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAAC‑CCGcc > 1:2614360/1‑93 (MQ=255) ttACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCCGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAAC‑CCGCCt > 2:7341314/1‑93 (MQ=255) ttACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCCGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAAC‑CCGCCt > 2:1268886/1‑93 (MQ=255) ttACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCCGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAAC‑CCGCCt > 1:3915633/1‑93 (MQ=255) tACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCCGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAAC‑CCGCCTg < 2:707031/93‑1 (MQ=255) tACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCCGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAAC‑CCGCCTg < 2:3413248/93‑1 (MQ=255) aCGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCCGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAAC‑CCGCCTgg < 1:7500073/93‑1 (MQ=255) cGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCCGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAAC‑CCGCCTggg > 1:938512/1‑93 (MQ=255) gATGAAAACGGTACGCCGGTAGACATCGTACTGAACCCGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAAC‑CCGCCTGGGt > 1:126991/1‑93 (MQ=255) gATGAAAACGGTACGCCGGTAGACATCGTACTGAACCCGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAAC‑CCGCCTGGGt > 2:4488848/1‑93 (MQ=255) aTGAAAACGGTACGCCGGTAGACATCGTACTGAACCCGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAAC‑CCGCCTGGGTa < 2:2996563/93‑1 (MQ=255) aTGAAAACGGTACGCCGGTAGACATCGTACTGAACCCGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAAC‑CCGCCTGGGTa > 1:3604865/1‑93 (MQ=255) aTGAAAACGGTACGCCGGTAGACATCGTACTGAACCCGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAAC‑CCGCCTGGGTa < 2:2124580/93‑1 (MQ=255) aTGAAAACGGTACGCCGGTAGACATCGTACTGAACCCGCTGGGCGTACCGTCTCGTATGAACATCGGGCAGATCCTCGAAAC‑CGGCCTGGGtt > 1:2019055/1‑92 (MQ=255) tGAAAACGGTACGCCGGTAGACATCGTACTGAACCCGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAAC‑CCGCCTGGGTAt < 1:6711968/93‑1 (MQ=255) tGAAAACGGTACGCCGGTAGACATCGTACTGAACCCGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAAC‑CCGCCTGGGTAt > 1:357255/1‑93 (MQ=255) gAAAACGGTACGCCGGTAGACATCGTACTGAACCCGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAAC‑CCGCCTGGGTATg > 1:2539760/1‑93 (MQ=255) gAAAACGGTACGCCGGTAGACATCGTACTGAACCCGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAAC‑CCGCCTGGGTATg < 2:3617601/93‑1 (MQ=255) aaCGGTACGCCGGTAGACATCGTACTGAACCCGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAAC‑CCGCCTGGGTATGGCt > 1:7010131/1‑93 (MQ=255) aaCGGTACGCCGGTAGACATCGTACTGAACCCGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAAC‑CCGCCTGGGTATGGCt < 1:1606943/93‑1 (MQ=255) ggTACGCCGGTAGACATCGTACTGAACCCGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAAC‑CCGCCTGGGTATGGCTGCg > 1:4096954/1‑93 (MQ=255) aCGCCGGTAGACATCGTACTGAACCCGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAAC‑CCGCCTGGGTATGGCTGCGaaa < 1:5945019/93‑1 (MQ=255) cGCCGGTAGACATCGTACTGAACCCGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAAC‑CCGCCTGGGTATGGCTGCGAAAg > 2:1880262/1‑93 (MQ=255) ggTAGACATCGTACTGAACCCGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGTAt < 2:4565481/93‑1 (MQ=255) ggTAGACATCGTACTGAACCCGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGTAt > 1:3462735/1‑93 (MQ=255) gTAGACATCGTACTGAACCCGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGTATc > 2:2529918/1‑93 (MQ=255) tAGACATCGTACTGAACCCGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGGAAC‑CCGCCTGGGTATGGCTGCGAAAGGTATCg > 2:4062186/1‑93 (MQ=255) aGACATCGTACTGAACCCGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGTATCgg > 2:5859537/1‑93 (MQ=255) gACATCGTACTGAACCCGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGTATCGGc < 1:1614709/93‑1 (MQ=255) aCATCGTACTGAACCCGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGTATCGGCg < 1:567158/93‑1 (MQ=255) cATCGTACTGAACCCGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGTATCGGCGa > 2:949370/1‑93 (MQ=255) tCGTACTGAACCCGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGTATCGGCGACa > 2:4383186/1‑93 (MQ=255) tCGTACTGAACCCGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGGATCGGCGACa > 1:5210696/1‑93 (MQ=255) gTACTGAACCCGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGTATCGGCGACAAg > 2:798260/1‑93 (MQ=255) aCTGAACCCGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGAt < 2:6151440/93‑1 (MQ=255) aCTGAACCCGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGAt < 1:6627503/93‑1 (MQ=255) cTGAACCCGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATc < 2:6504202/93‑1 (MQ=255) cTGAACCCGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATc < 1:2913680/93‑1 (MQ=255) tGAACCCGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCa > 2:4969740/1‑93 (MQ=255) gAACCCGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCaa > 2:6314238/1‑93 (MQ=255) gAACCCGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCaa > 2:545549/1‑93 (MQ=255) aaCCCGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAAc > 1:2823522/1‑93 (MQ=255) aaCCCGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAAc < 2:4685649/93‑1 (MQ=255) aCCCGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACg < 1:6682951/93‑1 (MQ=255) aCCCGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACg > 2:2777898/1‑93 (MQ=255) cccGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGc > 2:6385910/1‑93 (MQ=255) cccGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGc < 2:4113447/93‑1 (MQ=255) ccGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGcc > 1:1434850/1‑93 (MQ=255) ccGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGcc > 2:2401290/1‑93 (MQ=255) cGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCa > 1:800818/1‑93 (MQ=255) cGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCa < 2:4805399/93‑1 (MQ=255) gCTGGGCGTTCCTGCTCGTATGAACATCGGTCAGATCCTCGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCAt < 1:5071036/93‑1 (MQ=255) tGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGGATCGGCGACAAGATCAACGCCATGc > 1:1469728/1‑93 (MQ=255) gTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGaaa > 2:1515458/1‑93 (MQ=255) gTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGaaa < 2:4151663/93‑1 (MQ=255) gTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGaaa > 1:7067851/1‑93 (MQ=255) gTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGaaa < 2:457995/93‑1 (MQ=255) gTACCGTCTCGTATGAACATCGGCCAGATCCTCGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGGATCTGCGGCAAGATCAACGCCATGCTGaaa > 1:7324003/1‑93 (MQ=255) tACCGTCTCGTATGAACATCGGTCAGATCCTCGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAAc < 2:37325/93‑1 (MQ=255) tACCGTCTCGTATGAACATCGGTCAGATCCTCGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAAc > 1:1852655/1‑93 (MQ=255) tACCGTCTCGTATGAACATCGGTCAGATCCTCGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAAc > 1:4789370/1‑93 (MQ=255) aCCGTCTCGTATGAACATCGGTCAGATCCTCGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAAca < 1:7144377/93‑1 (MQ=255) ccGTCTCGTATGAACATCGGTCAGATCCTCGAAACGCCGCCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAAca < 1:3718685/93‑1 (MQ=255) ccGTCTCGTATGAACATCGGTCAGATCCTCGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAAcag < 1:4673230/93‑1 (MQ=255) ccGTCTCGTATGAACATCGGTCAGATCCTCGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAAcag > 2:3226383/1‑93 (MQ=255) ccGTCTCGTATGAACATCGGTCAGATCCTCGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAAcag > 2:3958732/1‑93 (MQ=255) ccGACTCGTATGAACATCGGTCAGATCCTCGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGACCAACGCCATGCTGAAAcag < 1:1162291/93‑1 (MQ=255) cGTCTCGTATGAACATCGGTCAGATCCTCGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAAcagc > 2:2964420/1‑93 (MQ=255) cGTCTCGTATGAACATCGGTCAGATCCTCGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAAcagc > 2:2907196/1‑93 (MQ=255) gTCTCGTATGAACATCGGTCAGATCCTCGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAAcagca > 2:6032045/1‑93 (MQ=255) tctcGTATGAACATCGGTCAGATCCTCGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAAcagcag < 2:6576949/93‑1 (MQ=255) cGTATGAACATCGGTCAGATCCTCGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCaa > 2:7507883/1‑93 (MQ=255) cGTATGAACATCGGTCAGATCCTCGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCaa < 2:1605874/93‑1 (MQ=255) tATGAACATCGGTCAGATCCTCGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCaaga < 2:1431815/93‑1 (MQ=255) tATGAACATCGGTCAGATCCTCGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCaaga > 1:6534059/1‑93 (MQ=255) tATGAACATCGGTCAGATCCTCGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCaaga > 1:1717373/1‑93 (MQ=255) tATGAACATCGGTCAGATCCTCGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCaaga > 2:5592410/1‑93 (MQ=255) aTGAACATCGGTCAGATCCTCGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCaagaa < 2:7144828/93‑1 (MQ=255) cATCGGTCAGATCCTCGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTcgc > 2:1719656/1‑93 (MQ=255) cATCGGTCAGATCCTCGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTcgc < 2:5190346/93‑1 (MQ=255) aTCGGTCAGATCCTCGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTcgcg > 2:3773760/1‑93 (MQ=255) aTCGGTCAGATCCTCGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTcgcg < 1:3284441/93‑1 (MQ=255) gTCAGATCCTCGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAAc < 1:6021514/93‑1 (MQ=255) gTCAGATCCTCGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAAc < 2:1116710/93‑1 (MQ=255) gTCAGATCCTCGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAAc > 2:5219236/1‑93 (MQ=255) gTCAGATCCTCGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAAc > 2:2262412/1‑93 (MQ=255) gTCAGATCCTCGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGGATAGGCGACAAGAGCAACGCCATGCTGAAAAACCAGCAAGAAATCGCGAAAc > 1:6184481/1‑93 (MQ=255) aTCCTCGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTgcgc > 1:42496/1‑93 (MQ=255) aTCCTCGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTgcgc > 1:2792437/1‑93 (MQ=255) tCCTCGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGcgcg > 1:1816219/1‑93 (MQ=255) tCCTCGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGcgcg > 2:6752727/1‑93 (MQ=255) tCGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAAt > 1:2168553/1‑93 (MQ=255) tCGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAAt < 1:5339123/93‑1 (MQ=255) tCGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAAt < 1:4409475/93‑1 (MQ=255) cGAAAC‑CCGCCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAAtt < 1:3016186/93‑1 (MQ=255) aaaC‑CCGCCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCa < 1:4597355/93‑1 (MQ=255) aC‑CCGCCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATc > 2:5938874/1‑93 (MQ=255) aC‑CCGCCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATc < 2:2705593/93‑1 (MQ=255) aC‑CCGCCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATc > 2:3019476/1‑93 (MQ=255) | CTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCCGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAAC‑CCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCC > NC_000913/4182079‑4182258 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |