Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,255,670 C→T A117V (GCT→GTT)  dinF → DNA‑damage‑inducible protein F

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,255,6700CT76.6% 666.6 / 180.2 333A117V (GCT→GTT) dinFDNA‑damage‑inducible protein F
Reads supporting (aligned to +/- strand):  ref base C (39/39);  new base T (113/142);  total (152/181)
Fisher's exact test for biased strand distribution p-value = 4.36e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.68e-03

Only 100 of 343 total aligned reads displayed.

CACCACCGGGCTGACTGCGCAGGCTTATGGTGCCAAAAATCCTCAGGCATTAGCCCGTACGCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGCTGGGGCGTTAATTGCGCTGCTGCGTACGCCGATTATCGATCTGGCGCTGCATATTGTTGGCGGTAGTGAGGCAGTCCTGGAACAGGCGCGGC  >  NC_000913/4255578‑4255762
                                                                                            |                                                                                            
caccacCGGGCTGACTGCGCAGGCTTATGGTGCCAAAAATCCTCAGGCATTAGCCCGTACGCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGc                                                                                              >  2:1463772/1‑93 (MQ=255)
  ccaccGGGCTGACTGCGCAGGCTTATGGTGCCAAAAATCCTCAGGCATTAGCCCGTACGCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGTTg                                                                                            >  2:1850551/1‑93 (MQ=255)
  ccaccGGGCTGACTGCGCAGGCTTATGGTGCCAAAAATCCTCAGGCATTAGCCCGTACGCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGTTg                                                                                            >  2:5995465/1‑93 (MQ=255)
  ccaccGGGCTGACTGCGCAGGCTTATGGTGCCAAAAATCCTCAGGCATTAGCCCGTACGCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGCTg                                                                                            <  1:5736673/93‑1 (MQ=255)
   caccGGGCTGACTGCGCAGGCTTATGGTGCCAAAAATCCTCAGGCATTAGCCCGTACGCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGTTgg                                                                                           <  2:3786440/93‑1 (MQ=255)
   caccGGGCTGACTGCGCAGGCTTATGGTGCCAAAAATCCTCAGGCATTAGCCCGTACGCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGTTgg                                                                                           <  1:6979002/93‑1 (MQ=255)
   caccGGGCTGACTGCGCAGGCTTATGGTGCCAAAAATCCTCAGGCATTAGCCCGTACGCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGCTgg                                                                                           <  1:5888631/93‑1 (MQ=255)
   caccGGGCTGACTGCGCAGGCTTATGGTGCCAAAAATCCTCAGGCATTAGCCCGTACGCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGCTgg                                                                                           <  1:2347493/93‑1 (MQ=255)
   caccGGGCTGACTGCGCAGGCTTATGGTGCCAAAAATCCTCAGGCATTAGCCCGTACGCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGCTgg                                                                                           >  1:726700/1‑93 (MQ=255)
    accGGGCTGACTGCGCAGGCTTATGGTGCCAAAAATCCTCAGGCATTAGCCCGTACGCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGTTggg                                                                                          >  2:908197/1‑93 (MQ=255)
    accGGGCTGACTGCGCAGGCTTATGGTGCCAAAAATCCTCAGGCATTAGCCCGTACGCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGTTggg                                                                                          <  2:3272818/93‑1 (MQ=255)
    accGGGCTGACTGCGCAGGCTTATGGTGCCAAAAATCCTCAGGCATTAGCCCGTACGCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGTTggg                                                                                          >  1:5630909/1‑93 (MQ=255)
    accGGGCTGACTGCGCAGGCTTATGGTGCCAAAAATCCTCAGGCATTAGCCCGTACGCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGCTggg                                                                                          >  1:6513808/1‑93 (MQ=255)
     ccGGGCTGACTGCGCAGGCTTATGGTGCCAAAAATCCTCAGGCATTAGCCCGTACGCTGGTGCAACCGTTGCTGTTGGCgttgggggttgggg                                                                                         <  2:7183451/93‑1 (MQ=255)
       gggCTGACTGCGCAGGCTTATGGTGCCAAAAATCCTCAGGCATTAGCCCGTACGCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGTTGGGGCg                                                                                       <  1:3925786/93‑1 (MQ=255)
       gggCTGACTGCGCAGGCTTATGGTGCCAAAAATCCTCAGGCATTAGCCCGTACGCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGCTGGGGCg                                                                                       >  2:5507397/1‑93 (MQ=255)
        ggCTGACTGCGCAGGCTTATGGTGCCAAAAATCCTCAGGCATTAGCCCGTACGCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGTTGGGGCGt                                                                                      >  2:3521786/1‑93 (MQ=255)
        ggCTGACTGCGCAGGCTTATGGTGCCAAAAATCCTCAGGCATTAGCCCGTACGCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGCTGGGGCGt                                                                                      <  2:6640029/93‑1 (MQ=255)
           tGACTGCGCAGGCTTATGGTGCCAAAAATCCTCAGGCATTAGCCCGTACGCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGTTGGGGCGTTaa                                                                                   >  2:180530/1‑93 (MQ=255)
           tGACTGCGCAGGCTTATGGTGCCAAAAATCCTCAGGCATTAGCCCGTACGCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGTTGGGGCGTTaa                                                                                   <  2:6691060/93‑1 (MQ=255)
           tGACTGCGCAGGCTTATGGTGCCAAAAATCCTCAGGCATTAGCCCGTACGCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGCTGGGGCGTTaa                                                                                   >  2:804873/1‑93 (MQ=255)
            gACTGCGCAGGCTTATGGTGCCAAAAATCCTCAGGCATTAGCCCGTACGCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGTTGGGGCGTTAAt                                                                                  <  1:2390150/93‑1 (MQ=255)
            gACTGCGCAGGCTTATGGTGCCAAAAATCCTCAGGCATTAGCCCGTACGCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGTTGGGGCGTTAAt                                                                                  >  2:6789530/1‑93 (MQ=255)
            gACTGCGCAGGCTTATGGTGCCAAAAATCCTCAGGCATTAGCCCGTACGCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGTTGGGGCGTTAAt                                                                                  >  2:2934310/1‑93 (MQ=255)
               tGCGCAGGCTTATGGTGCCAAAAATCCTCAGGCATTAGCCCGTACGCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGTTGGGGCGTTAATTgc                                                                               <  1:2634680/93‑1 (MQ=255)
               tGCGCAGGCTTATGGTGCCAAAAATCCTCAGGCATTAGCCCGTACGCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGCTGGGGCGTTAATTgc                                                                               >  1:6387735/1‑93 (MQ=255)
                gcgcAGGCTTATGGTGCCAAAAATCCTCAGGCATTAGCCCGTACGCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGCTGGGGCGTTAATTgcg                                                                              <  1:4726466/93‑1 (MQ=255)
                    aGGCTTATGGTGCCAAAAATCCTCAGGCATTAGCCCGTACGCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGTTGGGGCGTTAATTGCgctgc                                                                          >  2:3130203/1‑93 (MQ=255)
                    aGGCTTATGGTGCCAAAAATCCTCAGGCATTAGCCCGTACGCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGTTGGGGCGTTAATTGCgctgc                                                                          <  1:5023334/93‑1 (MQ=255)
                    aGGCTTATGGTGCCAAAAATCCTCAGGCATTAGCCCGTACGCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGCTGGGGCGTTAATTGCgctgc                                                                          >  1:5414885/1‑93 (MQ=255)
                     ggCTTATGGTGCCAAAAATCCTCAGGCATTAGCCCGTACGCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGCTGGGGCGTTAATTGCgctgct                                                                         >  2:4821728/1‑93 (MQ=255)
                       cTTATGGTGCCAAAAATCCTCAGGCATTAGCCCGTACGCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGTTGGGGCGTTAATTGCGCtgctgc                                                                       >  2:1996340/1‑93 (MQ=255)
                       cTTATGGTGCCAAAAATCCTCAGGCATTAGCCCGTACGCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGTTGGGGCGTTAATTGCGCtgctgc                                                                       <  2:863097/93‑1 (MQ=255)
                       cTTATGGTGCCAAAAATCCTCAGGCATTAGCCCGTACGCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGTTGGGGCGTTAATTGCGCtgctgc                                                                       <  1:3615945/93‑1 (MQ=255)
                             gTGCCAAAAATCCTCAGGCATTAGCCCGTACGCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGTTGGGGCGTTAATTGCGCTGCTGCGTACGc                                                                 <  1:6930700/93‑1 (MQ=255)
                              tGCCAAAAATCCTCAGGCATTAGCCCGTACGCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGTTGGGGCGTTAATTGCGCTGCTGCGTACGcc                                                                <  2:5425411/93‑1 (MQ=255)
                              tGCCAAAAATCCTCAGGCATTAGCCCGTACGCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGTTGGGGCGTTAATTGCGCTGCTGCGTACGcc                                                                >  2:5650886/1‑93 (MQ=255)
                                ccAAAAATCCTCAGGCATTAGCCCGTACGCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGTTGGGGCGTTAATTGCGCTGCTGCGTACGCCGa                                                              <  2:5221329/93‑1 (MQ=255)
                                 cAAAAATCCTCAGGCATTAGCCCGTACGCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGTTGGGGCGTTAATTGCGCTGCTGCGTACGCCGAt                                                             <  1:4276712/93‑1 (MQ=255)
                                    aaaTCCTCAGGCATTAGCCCGTACGCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGCTGGGGCGTTAATTGCGCTGCTGCGTACGCCGATTAt                                                          <  1:2960230/93‑1 (MQ=255)
                                     aaTCCTCAGGCATTAGCCCGTACGCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGTTGGGGCGTTAATTGCGCTGCTGCGTACGCCGATTATc                                                         >  2:5832778/1‑93 (MQ=255)
                                     aaTCCTCAGGCATTAGCCCGTACGCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGCTGGGGCGTTAATTGCGCTGCTGCGTACGCCGATTATc                                                         >  1:7185350/1‑93 (MQ=255)
                                      aTCCTCAGGCATTAGCCCGTACGCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGCTGGGGCGTTAATTGCGCTGCTGCGTACGCCGATTATCg                                                        >  1:788902/1‑93 (MQ=255)
                                       tCCTCAGGCATTAGCCCGTACGCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGTTGGGGCGTTAATTGCGCTGCTGCGTACGCCGATTATCGa                                                       <  1:1420765/93‑1 (MQ=255)
                                       tCCTCAGGCATTAGCCCGTACGCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGCTGGGGCGTTAATTGCGCTGCTGCGTACGCCGATTATcnn                                                       >  2:3634611/1‑91 (MQ=255)
                                         cTCAGGCATTAGCCCGTACGCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGTTGGGGCGTTAATTGCGCTGCTGCGTACGCCGATTATCGATc                                                     <  1:3675843/93‑1 (MQ=255)
                                         cTCAGGCATTAGCCCGTACGCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGTTGGGGCGTTAATTGCGCTGCTGCGTACGCCGATTATCGATc                                                     >  2:1284057/1‑93 (MQ=255)
                                         cTCAGGCATTAGCCCGTACGCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGCTGGGGCGTTAATTGCGCTGCTGCGTACGCCGATTATCGATc                                                     >  2:2761570/1‑93 (MQ=255)
                                         cTCAGGCATTAGCCCGTACGCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGCTGGGGCGTTAATTGCGCTGCTGCGTACGCCGATTATCGATc                                                     >  1:749645/1‑93 (MQ=255)
                                         cTCAGGCATTAGCCCGTACGCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGCTGGGGCGTTAATTGCGCTGCTGCGTACGCCGATTATCGATc                                                     >  1:4859254/1‑93 (MQ=255)
                                            aGGCATTAGCCCGTACGCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGTTGGGGCGTTAATTGCGCTGCTGCGTACGCCGATTATCGATCTgg                                                  <  1:2488001/93‑1 (MQ=255)
                                              gCATTAGCCCGTACGCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGTTGGGGCGTTAATTGCGCTGCTGCGTACGCCGATTATCGATCTGgcg                                                >  1:1890469/1‑93 (MQ=255)
                                              gCATTAGCCCGTACGCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGCTGGGGCGTTAATTGCGCTGCTGCGTACGCCGATTATCGATCTGgcg                                                >  1:1330754/1‑93 (MQ=255)
                                                aTTAGCCCGTACGCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGTTGGGGCGTTAATTGCGCTGCTGCGTACGCCGATTATCGATCTGGCGCt                                              >  1:2022715/1‑93 (MQ=255)
                                                aTTAGCCCGTACGCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGTTGGGGCGTTAATTGCGCTGCTGCGTACGCCGATTATCGATCTGGCGCt                                              >  1:1678890/1‑93 (MQ=255)
                                                 ttAGCCCGTACGCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGTTGGGGCGTTAATTGCGCTGCTGCGTACGCCGATTATCGATCTGGCGCTg                                             >  1:5527248/1‑93 (MQ=255)
                                                   aGCCCGTACGCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGCTGGGGCGTTAATTGCGCTGCTGCGTACGCCGATTATCGATCTGGCGCTGCa                                           >  1:2062797/1‑93 (MQ=255)
                                                    gCCCGTACGCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGTTGGGGCGTTAATTGCGCTGCTGCGTACGCCGATTATCGATCTGGCGCTGCat                                          <  2:4580323/93‑1 (MQ=255)
                                                     cccGTACGCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGTTGGGGCGTTAATTGCGCTGCTGCGTACGCCGATTATCGATCTGGCGCTGCata                                         <  1:4504387/93‑1 (MQ=255)
                                                      ccGTACGCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGTTGGGGCGTTAATTGCGCTGCTGCGTACGCCGATTATCGATCTGGCGCTGCatat                                        >  2:6557139/1‑93 (MQ=255)
                                                       cGTACGCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGTTGGGGCGTTAATTGCGCTGCTGCGTACGCCGATTATCGATCTGGCGCTGCATAtt                                       <  1:4348811/93‑1 (MQ=255)
                                                       cGTACGCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGTTGGGGCGTTAATTGCGCTGCTGCGTACGCCGATTATCGATCTGGCGCTGCATAtt                                       >  2:4921691/1‑93 (MQ=255)
                                                       cGTACGCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGTTGGGGCGTTAATTGCGCTGCTGCGTACGCCGATTATCGATCTGGCGCTGCATAtt                                       >  1:6693482/1‑93 (MQ=255)
                                                        gTACGCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGTTGGGGCGTTAATTGCGCTGCTGCGTACGCCGATTATCGATCTGGCGCTGCATAttg                                      >  2:6506435/1‑93 (MQ=255)
                                                        gTACGCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGTTGGGGCGTTAATTGCGCTGCTGCGTACGCCGATTATCGATCTGGCGCTGCATAttg                                      >  2:4078150/1‑93 (MQ=255)
                                                           cGCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGTTGGGGCGTTAATTGCGCTGCTGCGTACGCCGATTATCGATCTGGCGCTGCATAttgttg                                   >  1:3520176/1‑93 (MQ=255)
                                                            gCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGCTGGGGCGTTAATTGCGCTGCTGCGTACGCCGATTATCGATCTGGCGCTGCATATTGTTgg                                  <  2:2478775/93‑1 (MQ=255)
                                                             cTGGTGCAACCGTTGCTGTTGGCGTTGGGGGTTGGGGCGTTAATTGCGCTGCTGCGTACGCCGATTATCGATCTGGCGCTGCATATTGTTGGc                                 <  1:116764/93‑1 (MQ=255)
                                                              tGGTGCAACCGTTGCTGTTGGCGTTGGGGGTTGGGGCGTTAATTGCGCTGCTGCGTACGCCGATTATCGATCTGGCGCTGCATATTGTTGGCg                                <  2:6884832/93‑1 (MQ=255)
                                                               ggTGCAACCGTTGCTGTTGGCGTTGGGGGTTGGGGCGTTAATTGCGCTGCTGCGTACGCCGATTATCGATCTGGCGCTGCATATTGTTGGCgg                               >  2:4466772/1‑93 (MQ=255)
                                                                gTGCAACCGTTGCTGTTGGCGTTGGGGGCTGGGGCGTTAATTGCGCTGCTGCGTACGCCGATTATCGATCTGGCGCTGCATATTGTTGGCGGt                              >  2:4278460/1‑93 (MQ=255)
                                                                 tGCAACCGTTGCTGTTGGCGTTGGGGGTTGGGGCGTTAATTGCGCTGCTGCGTACGCCGATTATCGATCTGGCGCTGCATATTGTTGGCGGTa                             <  2:6969755/93‑1 (MQ=255)
                                                                 tGCAACCGTTGCTGTTGGCGTTGGGGGTTGGGGCGTTAATTGCGCTGCTGCGTACGCCGATTATCGATCTGGCGCTGCATATTGTTGGCGGTa                             <  1:3740253/93‑1 (MQ=255)
                                                                 tGCAACCGTTGCTGTTGGCGTTGGGGGTTGGGGCGTTAATTGCGCTGCTGCGTACGCCGATTATCGATCTGGCGCTGCATATTGTTGGCGGTa                             <  2:4343996/93‑1 (MQ=255)
                                                                 tGCAACCGTTGCTGTTGGCGTTGGGGGTTGGGGCGTTAATTGCGCTGCTGCGTACGCCGATTATCGATCTGGCGCTGCATATTGTTGGCGGTa                             <  1:851530/93‑1 (MQ=255)
                                                                  gCAACCGTTGCTGTTGGCGTTGGGGGCTGGGGCGTTAATTGCGCTGCTGCGTACGCCGATTATCGATCTGGCGCTGCATATTGTTGGCGGTAg                            >  1:276411/1‑93 (MQ=255)
                                                                   cAACCGTTGCTGTTGGCGTTGGGGGTTGGGGCGTTAATTGCGCTGCTGCGTACGCCGATTATCGATCTGGCGCTGCATATTGTTGGCGGTAGt                           <  1:3214754/93‑1 (MQ=255)
                                                                   cAACCGTTGCTGTTGGCGTTGGGGGCTGGGGCGTTAATTGCGCTGCTGCGTACGCCGATTATCGATCTGGCGCTGCATATTGTTGGCGGTAGt                           >  2:2672080/1‑93 (MQ=255)
                                                                     aCCGTTGCTGTTGGCGTTGGGGGTTGGGGCGTTAATTGCGCTGCTGCGTACGCCGATTATCGATCTGGCGCTGCATATTGTTGGCGGTAGTGa                         >  1:3094263/1‑93 (MQ=255)
                                                                     aCCGTTGCTGTTGGCGTTGGGGGCTGGGGCGTTAATTGCGCTGCTGCGTACGCCGATTATCGATCTGGCGCTGCATATTGTTGGCGGTAGTGa                         >  2:532966/1‑93 (MQ=255)
                                                                       cGTTGCTGTTGGCGTTGGGGGTTGGGGCGTTAATTGCGCTGCTGCGTACGCCGATTATCGATCTGGCGCTGCATATTGTTGGCGGTAGTGAgg                       <  2:1540274/93‑1 (MQ=255)
                                                                       cGTTGCTGTTGGCGTTGGGGGTTGGGGCGTTAATTGCGCTGCTGCGTACGCCGATTATCGATCTGGCGCTGCATATTGTTGGCGGTAGTGAgg                       <  1:1511986/93‑1 (MQ=255)
                                                                       cGTTGCTGTTGGCGTTGGGGGTTGGGGCGTTAATTGCGCTGCTGCGTACGCCGATTATCGATCTGGCGCTGCATATTGTTGGCGGTAGTGAgg                       >  2:7514646/1‑93 (MQ=255)
                                                                         ttGCTGTTGGCGTTGGGGGTTGGGGCGTTAATTGCGCTGCTGCGTACGCCGATTATCGATCTGGCGCTGCATATTGTTGGCGGTAGTGAGGCa                     <  1:2856690/93‑1 (MQ=255)
                                                                         ttGCTGTTGGCGTTGGGGGTTGGGGCGTTAATTGCGCTGCTGCGTACGCCGATTATCGATCTGGCGCTGCATATTGTTGGCGGTAGTGAGGCa                     <  1:2542717/93‑1 (MQ=255)
                                                                         ttGCTGTTGGCGTTGGGGGTTGGGGCGTTAATTGCGCTGCTGCGTACGCCGATTATCGATCTGGCGCTGCATATTGTTGGCGGTAGTGAGGCa                     <  2:1086298/93‑1 (MQ=255)
                                                                           gCTGTTGGCGTTGGGGGTTGGGGCGTTAATTGCGCTGCTGCGTACGCCGATTATCGATCTGGCGCTGCATATTGTTGGCGGTAGTGAGGCAGt                   <  1:1252050/93‑1 (MQ=255)
                                                                             tGTTGGCGTTGGGGGTTGGGGCGTTAATTGCGCTGCTGCGTACGCCGATTATCGATCTGGCGCTGCATATTGTTGGCGGTAGTGAGGCAGTcc                 >  2:6215748/1‑93 (MQ=255)
                                                                             tGTTGGCGTTGGGGGTTGGGGCGTTAATTGCGCTGCTGCGTACGCCGATTATCGATCTGGCGCTGCATATTGTTGGCGGTAGTGAGGCAGTcc                 >  1:4009377/1‑93 (MQ=255)
                                                                              gTTGGCGTTGGGGGTTGGGGCGTTAATTGCGCTGCTGCGTACGCCGATTATCGATCTGGCGCTGCATATTGTTGGCGGTAGTGAGGCAGTCCt                >  2:6325109/1‑93 (MQ=255)
                                                                                 ggCGTTGGGGGTTGGGGCGTTAATTGCGCTGCTGCGTACGCCGATTATCGATCTGGCGCTGCATATTGTTGGCGGTAGTGAGGCAGTCCTGGa             <  1:6127148/93‑1 (MQ=255)
                                                                                  gCGTTGGGGGTTGGGGCGTTAATTGCGCTGCTGCGTACGCCGATTATCGATCTGGCGCTGCATATTGTTGGCGGTAGTGAGGCAGTCCTGGaa            <  1:490137/93‑1 (MQ=255)
                                                                                  gCGTTGGGGGTTGGGGCGTTAATTGCGCTGCTGCGTACGCCGATTATCGATCTGGCGCTGCATATTGTTGGCGGTAGTGAGGCAGTCCTGGaa            <  2:5175986/93‑1 (MQ=255)
                                                                                   cGTTGGGGGTTGGGGCGTTAATTGCGCTGCTGCGTACGCCGATTATCGATCTGGCGCTGCATATTGTTGGCGGTAGTGAGGCAGTCCTGGAAc           <  2:387226/93‑1 (MQ=255)
                                                                                    gttgggggttggggCGTTAATTGCGCTGCTGCGTACGCCGATTATCGATCTGGCGCTGCATATTGTTGGCGGTAGTGAGGCAGTCCTGGAACa          >  2:7377053/1‑93 (MQ=255)
                                                                                    gttgggggttggggCGTTAATTGCGCTGCTGCGTACGCCGATTATCGATCTGGCGCTGCATATTGTTGGCGGTAGTGAGGCAGTCCTGGAACa          >  1:445785/1‑93 (MQ=255)
                                                                                     ttGGGGGTTGGGGCGTTAATTGCGCTGCTGCGTACGCCGATTATCGATCTGGCGCTGCATATTGTTGGCGGTAGTGAGGCAGTCCTGGAACAg         <  1:4970673/93‑1 (MQ=255)
                                                                                      tGGGGGTTGGGGCGTTAATTGCGCTGCTGCGTACGCCGATTATCGATCTGGCGCTGCATATTGTTGGCGGTAGTGAGGCAGTCCTGGAACAgg        <  1:1101655/93‑1 (MQ=255)
                                                                                       gggggTTGGGGCGTTAATTGCGCTGCTGCGTACGCCGATTATCGATCTGGCGCTGCATATTGTTGGCGGTAGTGAGGCAGTCCTGGAACAggc       <  1:6169905/93‑1 (MQ=255)
                                                                                         gggCTGGGGCGTTAATTGCGCTGCTGCGTACGCCGATTATCGATCTGGCGCTGCATATTGTTGGCGGTAGTGAGGCAGTCCTGGAACAggcgc     <  2:2553871/93‑1 (MQ=255)
                                                                                            |                                                                                            
CACCACCGGGCTGACTGCGCAGGCTTATGGTGCCAAAAATCCTCAGGCATTAGCCCGTACGCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGCTGGGGCGTTAATTGCGCTGCTGCGTACGCCGATTATCGATCTGGCGCTGCATATTGTTGGCGGTAGTGAGGCAGTCCTGGAACAGGCGCGGC  >  NC_000913/4255578‑4255762

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: