Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,362,298 T→C Q108R (CAG→CGG)  dsbD ← thiol:disulfide interchange protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,362,2980TC83.5% 690.9 / 128.9 316Q108R (CAG→CGG) dsbDthiol:disulfide interchange protein
Reads supporting (aligned to +/- strand):  ref base T (25/27);  new base C (125/139);  total (150/166)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.89e-01

Only 100 of 317 total aligned reads displayed.

TTAACGGAACGGTTTTGGTTTCTGGCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGCCTTGCGGCAGC  >  NC_000913/4362206‑4362387
                                                                                            |                                                                                         
   acggaacggTTTTGGTTTCTGGCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGt                                                                                        >  1:1492083/1‑93 (MQ=255)
   acggaacggTTTTGGTTTCTGGCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGt                                                                                        <  2:2410192/93‑1 (MQ=255)
     ggaacggTTTTGGTTTCTGGCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTCAACGTCGCTCCCGCACTCGCCCGGTTg                                                                                      <  2:2353966/93‑1 (MQ=255)
       aacggTTTTGGTTTCTGGCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGAt                                                                                    <  2:2422448/93‑1 (MQ=255)
        acggTTTTGGTTTCTGGCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATg                                                                                   <  2:4846725/93‑1 (MQ=255)
        acggTTTTGGTTTCTGGCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATg                                                                                   <  1:2021708/93‑1 (MQ=255)
         cggTTTTGGTTTCTGGCGGATAACAGAAAACGGCATCAACACAGCCCTGGGAGGGGACAGTTAACGTCGCTTCCGGACTCGCCCGGTTggttg                                                                                  >  1:6146855/1‑89 (MQ=255)
          ggTTTTGGTTTCTGGCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGt                                                                                 >  2:1108007/1‑93 (MQ=255)
           gTTTTGGTTTCTGGCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGTg                                                                                >  1:3021942/1‑93 (MQ=255)
           gTTTTGGTTTCTGGCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTg                                                                                >  1:4212341/1‑93 (MQ=255)
            ttttGGTTTCTGGCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGa                                                                               >  1:4084425/1‑93 (MQ=255)
            ttttGGTTTCTGGCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGa                                                                               <  1:3286162/93‑1 (MQ=255)
             tttGGTTTCTGGCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGAc                                                                              >  2:2703292/1‑93 (MQ=255)
              ttGGTTTCTGGCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACg                                                                             <  2:6220897/93‑1 (MQ=255)
                 gTTTCTGGCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGa                                                                          <  2:6108333/93‑1 (MQ=255)
                  tttCTGGCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGaa                                                                         >  1:1155265/1‑93 (MQ=255)
                    tCTGGCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGc                                                                       >  1:2433482/1‑93 (MQ=255)
                    tCTGGCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGc                                                                       <  1:1628120/93‑1 (MQ=255)
                     cTGGCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCg                                                                      <  2:6430380/93‑1 (MQ=255)
                      tGGCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGt                                                                     >  1:1343244/1‑93 (MQ=255)
                       ggCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTc                                                                    >  1:693676/1‑93 (MQ=255)
                       ggCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTc                                                                    <  1:2611135/93‑1 (MQ=255)
                       ggCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTc                                                                    <  2:3626145/93‑1 (MQ=255)
                          ggATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGc                                                                 <  2:7489790/93‑1 (MQ=255)
                          ggATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGc                                                                 >  1:5457820/1‑93 (MQ=255)
                           gATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGcc                                                                <  1:911017/93‑1 (MQ=255)
                            aTAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCg                                                               >  2:1387430/1‑93 (MQ=255)
                             tAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGa                                                              >  2:4139009/1‑93 (MQ=255)
                             tAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGa                                                              >  2:4749411/1‑93 (MQ=255)
                              aaCAGAGACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGAt                                                             >  2:6988216/1‑93 (MQ=255)
                               aCAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATc                                                            >  1:4456773/1‑93 (MQ=255)
                               aCAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATc                                                            <  2:7189253/93‑1 (MQ=255)
                                cAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATcg                                                           >  2:6019707/1‑93 (MQ=255)
                                 aGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATcgc                                                          <  2:12425/93‑1 (MQ=255)
                                  aaaaCCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATcgcg                                                         <  1:6387099/92‑1 (MQ=255)
                                      ccGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTaa                                                     <  2:4457958/93‑1 (MQ=255)
                                           aTCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAAtctc                                                >  2:1524840/1‑93 (MQ=255)
                                           aTCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAAtctc                                                >  2:5741297/1‑93 (MQ=255)
                                             cAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGc                                              >  2:5317939/1‑93 (MQ=255)
                                             cAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGc                                              <  1:7257480/93‑1 (MQ=255)
                                              aGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCt                                             <  1:5393272/93‑1 (MQ=255)
                                               gCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCtt                                            <  2:6301751/93‑1 (MQ=255)
                                               gCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCtt                                            >  1:3624725/1‑93 (MQ=255)
                                               gCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCtt                                            <  1:4932321/93‑1 (MQ=255)
                                                cacaGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCttt                                           >  2:3864984/1‑93 (MQ=255)
                                                cacaGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCttt                                           <  1:2761301/93‑1 (MQ=255)
                                                cacaGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCttt                                           <  1:442383/93‑1 (MQ=255)
                                                 acaGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCtttt                                          <  1:4122909/93‑1 (MQ=255)
                                                 acaGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCtttt                                          <  2:3163011/93‑1 (MQ=255)
                                                 acaGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCtttt                                          >  2:1320601/1‑93 (MQ=255)
                                                 acaGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCtttt                                          <  1:3866110/93‑1 (MQ=255)
                                                 acaGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCtttt                                          <  1:3730648/93‑1 (MQ=255)
                                                  caGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTg                                         >  1:7128088/1‑93 (MQ=255)
                                                   aGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGc                                        <  1:5835331/93‑1 (MQ=255)
                                                   aGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGc                                        <  2:2748346/93‑1 (MQ=255)
                                                      ccTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGt                                     >  1:6662824/1‑93 (MQ=255)
                                                       cTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTa                                    >  2:6523679/1‑93 (MQ=255)
                                                        tGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTaa                                   >  1:5016117/1‑93 (MQ=255)
                                                          gTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTaaaa                                 <  1:5918830/93‑1 (MQ=255)
                                                           tAGGTGACAGTTAACGTTGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAAc                                >  2:2186112/1‑93 (MQ=255)
                                                           tAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAAc                                >  2:4412765/1‑93 (MQ=255)
                                                             ggTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTc                              >  1:1928572/1‑93 (MQ=255)
                                                              gTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCa                             <  2:5087347/93‑1 (MQ=255)
                                                              gTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCa                             >  2:1448914/1‑93 (MQ=255)
                                                               tGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCAt                            >  2:7353413/1‑93 (MQ=255)
                                                               tGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCAt                            >  2:4678196/1‑93 (MQ=255)
                                                                gACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATc                           <  1:631206/93‑1 (MQ=255)
                                                                gACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATc                           >  2:4119873/1‑93 (MQ=255)
                                                                gACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATc                           >  2:4252759/1‑93 (MQ=255)
                                                                 aCAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCt                          >  2:594131/1‑93 (MQ=255)
                                                                 aCAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCt                          >  2:6781076/1‑93 (MQ=255)
                                                                 aCAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCt                          <  2:4535122/93‑1 (MQ=255)
                                                                  cAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCtt                         >  2:302133/1‑93 (MQ=255)
                                                                  cAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCtt                         <  1:1775164/93‑1 (MQ=255)
                                                                  cAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCtt                         >  2:1809710/1‑93 (MQ=255)
                                                                    gTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCa                       <  1:3568782/93‑1 (MQ=255)
                                                                    gTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCa                       <  2:6885384/93‑1 (MQ=255)
                                                                    gTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCa                       >  2:7404005/1‑93 (MQ=255)
                                                                       aaCGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGc                    >  2:2869/1‑93 (MQ=255)
                                                                        aCGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGcc                   >  1:5547135/1‑93 (MQ=255)
                                                                           tCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGa                >  2:924463/1‑93 (MQ=255)
                                                                           tCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGa                <  1:3202561/93‑1 (MQ=255)
                                                                            cGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGAc               <  1:7020695/93‑1 (MQ=255)
                                                                             gCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACg              >  1:1385439/1‑93 (MQ=255)
                                                                             gCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACg              >  2:3458829/1‑93 (MQ=255)
                                                                               tCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGcc            <  2:1965880/93‑1 (MQ=255)
                                                                               tCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGcc            >  2:3745615/1‑93 (MQ=255)
                                                                                 ccGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGCCtt          >  1:3012485/1‑93 (MQ=255)
                                                                                   gcccTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGCCTTGc        <  1:5957906/90‑1 (MQ=255)
                                                                                   gCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGCCTTGc        >  2:2910051/1‑93 (MQ=255)
                                                                                   gCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGCCTTGc        >  1:2902003/1‑93 (MQ=255)
                                                                                   gCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGCCTTGc        <  1:818846/93‑1 (MQ=255)
                                                                                    cACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGCCTTGCg       <  1:4674323/93‑1 (MQ=255)
                                                                                    cACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGCCTTGCg       <  2:5164986/93‑1 (MQ=255)
                                                                                    cACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGCCTTGCg       <  2:5819189/93‑1 (MQ=255)
                                                                                      cTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGCCTTGCGGc     >  2:4036085/1‑93 (MQ=255)
                                                                                       tCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGCCTTGCGGCa    <  1:2266075/93‑1 (MQ=255)
                                                                                         gCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGCCTTGCGGCAGc  <  1:4870093/93‑1 (MQ=255)
                                                                                         gCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGCCTTGCGGCAGc  >  2:2616266/1‑93 (MQ=255)
                                                                                         gCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGCCTTGCGGCAGc  <  2:3300483/93‑1 (MQ=255)
                                                                                            |                                                                                         
TTAACGGAACGGTTTTGGTTTCTGGCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGCCTTGCGGCAGC  >  NC_000913/4362206‑4362387

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: