BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,506,550	T→C	C9R (TGT→CGT)	b4285 →	putative transposase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,506,550	0	T	C	84.9%	747.9 / 111.1	318	C9R (TGT→CGT)	b4285	putative transposase
Reads supporting (aligned to +/- strand): ref base T (26/22); new base C (148/122); total (174/144)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 324 total aligned reads displayed.

CTGACAGCTTCGGCTTTGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGTGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAGTCAGGTACTTGAGCTACAT  >  NC_000913/4506458‑4506642

  gACAGCTTCGGCTTTGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAgcgt                                                                                            <  2:450099/93‑1 (MQ=255)

   aCAGCTTCGGCTTTGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTc                                                                                           <  1:5164035/93‑1 (MQ=255)

     aGCTTCGGCTTTGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCg                                                                                         >  1:5947436/1‑93 (MQ=255)

      gCTTCGGCTTTGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGt                                                                                        >  1:1861024/1‑93 (MQ=255)

        ttCGGCTTTGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTa                                                                                      >  1:6881758/1‑93 (MQ=255)

        ttCGGCTTTGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTa                                                                                      >  2:12012/1‑93 (MQ=255)

        ttCGGCTTTGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTa                                                                                      >  2:4636194/1‑93 (MQ=255)

          cGGCTTTGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTaaa                                                                                    <  1:1951977/93‑1 (MQ=255)

            gCTTTGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGTGTCCGTTAAACt                                                                                  >  2:3837051/1‑93 (MQ=255)

            gCTTTGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGTGTCCGTTAAACt                                                                                  >  2:2545550/1‑93 (MQ=255)

             cTTTGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTc                                                                                 >  1:4466174/1‑93 (MQ=255)

              tttGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCa                                                                                <  2:885130/93‑1 (MQ=255)

              tttGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCa                                                                                >  1:389422/1‑93 (MQ=255)

               ttGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGTGTCCGTTAAACTCAg                                                                               <  2:5576228/93‑1 (MQ=255)

               ttGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGTGTCCGTTAAACTCAg                                                                               >  1:3564296/1‑93 (MQ=255)

               ttGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAg                                                                               <  1:7117043/93‑1 (MQ=255)

                tGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAgg                                                                              >  1:1024080/1‑93 (MQ=255)

                tGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAgg                                                                              <  2:809295/93‑1 (MQ=255)

                 gAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGc                                                                             <  2:7342115/93‑1 (MQ=255)

                 gAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGc                                                                             <  2:6691981/93‑1 (MQ=255)

                   aCTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTa                                                                           <  1:7490108/93‑1 (MQ=255)

                   aCTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTa                                                                           >  1:5714128/1‑93 (MQ=255)

                    cTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGTGTCCGTTAAACTCAGGCTAc                                                                          <  2:4980899/93‑1 (MQ=255)

                    cTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTAc                                                                          >  2:7201447/1‑93 (MQ=255)

                     tttttAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGTGTCCGTTAAACTCAGGCTAcc                                                                         >  2:1508356/1‑93 (MQ=255)

                     tttttAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTAcc                                                                         >  1:3701942/1‑93 (MQ=255)

                     tttttAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTAcc                                                                         >  1:2568642/1‑93 (MQ=255)

                        ttAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGTGTCCGTTAAACTCAGGCTACCTCa                                                                      <  2:6190214/93‑1 (MQ=255)

                        ttAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCa                                                                      <  1:4769025/93‑1 (MQ=255)

                         tAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAg                                                                     >  2:1114625/1‑93 (MQ=255)

                          agagTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAgg                                                                    <  1:133196/93‑1 (MQ=255)

                           gagTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGa                                                                   >  1:33185/1‑93 (MQ=255)

                              tAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGaaaa                                                                >  2:3690791/1‑93 (MQ=255)

                               aaCGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGaaaaa                                                               <  2:2271528/93‑1 (MQ=255)

                                 cGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAAcc                                                             >  2:4908521/1‑93 (MQ=255)

                                   ttGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGTGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGt                                                           >  1:3775731/1‑93 (MQ=255)

                                   ttGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGt                                                           >  2:5709006/1‑93 (MQ=255)

                                   ttGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGt                                                           >  2:2979522/1‑93 (MQ=255)

                                   ttGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGt                                                           <  2:2773419/93‑1 (MQ=255)

                                   ttGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGt                                                           >  2:2057431/1‑93 (MQ=255)

                                    tGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTc                                                          <  1:656481/93‑1 (MQ=255)

                                    tGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGCAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTc                                                          <  1:6221670/93‑1 (MQ=255)

                                     gggTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTcc                                                         >  1:1717829/1‑93 (MQ=255)

                                      ggTTTTTCTGCTCATTAATAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCt                                                        <  1:3021247/93‑1 (MQ=255)

                                        tttttCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGTGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGa                                                      >  2:6754129/1‑93 (MQ=255)

                                        tttttCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGa                                                      >  2:4470498/1‑93 (MQ=255)

                                         ttttCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGaa                                                     >  1:2204303/1‑93 (MQ=255)

                                           ttCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGaaaa                                                   <  1:2872299/93‑1 (MQ=255)

                                            tCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGGAGGAGTGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGaaaaa                                                  >  1:5909357/1‑93 (MQ=255)

                                            tCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGaaaaa                                                  >  1:4960946/1‑93 (MQ=255)

                                             cTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAAc                                                 >  1:7034066/1‑93 (MQ=255)

                                              tGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAAcc                                                >  1:2945409/1‑93 (MQ=255)

                                               gNTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAAccn                                               <  2:4237910/93‑2 (MQ=255)

                                               gCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACca                                               >  1:2635490/1‑93 (MQ=255)

                                               gCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACca                                               >  1:674311/1‑93 (MQ=255)

                                               gCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACca                                               >  2:1422888/1‑93 (MQ=255)

                                                cTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGTGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACcag                                              >  2:6523028/1‑93 (MQ=255)

                                                 tCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACcaga                                             <  1:7337333/93‑1 (MQ=255)

                                                  cATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGTGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACcagac                                            <  2:6862746/93‑1 (MQ=255)

                                                  cATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACcagac                                            <  2:6633589/93‑1 (MQ=255)

                                                  cATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACcagac                                            <  1:928807/93‑1 (MQ=255)

                                                  cATTATTAGCTCCTTCTGACGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACcagac                                            <  1:6122563/93‑1 (MQ=255)

                                                    ttattaGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACcagacgg                                          >  1:6208766/1‑93 (MQ=255)

                                                     tattaGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGTGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACcagacggc                                         >  2:360711/1‑93 (MQ=255)

                                                     tattaGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACcagacggc                                         <  2:3234068/93‑1 (MQ=255)

                                                     tattaGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACcagacggc                                         <  1:1539338/93‑1 (MQ=255)

                                                      attaGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACcagacggca                                        >  1:3458056/1‑93 (MQ=255)

                                                       ttaGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGTGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACcagacggcag                                       >  1:5296284/1‑93 (MQ=255)

                                                        taGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACcagacggcaga                                      <  2:5899980/93‑1 (MQ=255)

                                                        taGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACcagacggcaga                                      <  2:7023708/93‑1 (MQ=255)

                                                         aGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACcagacggcagac                                     <  2:2377278/93‑1 (MQ=255)

                                                          gCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACcagacggcagacg                                    <  1:1381436/93‑1 (MQ=255)

                                                          gCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACcagacggcagacg                                    >  1:5402168/1‑93 (MQ=255)

                                                          gCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACcagacggcagacg                                    <  2:1001709/93‑1 (MQ=255)

                                                           cTCGTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACcagacggcagacgg                                   >  1:6976246/1‑93 (MQ=255)

                                                           cTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACcagacggcagacgg                                   <  2:5227190/93‑1 (MQ=255)

                                                               ttCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTg                               >  2:4039148/1‑93 (MQ=255)

                                                               ttCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTg                               >  1:5457657/1‑93 (MQ=255)

                                                               ttCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTg                               <  1:641871/93‑1 (MQ=255)

                                                                  tGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTAt                            <  1:210784/93‑1 (MQ=255)

                                                                  tGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTAt                            >  1:6629288/1‑93 (MQ=255)

                                                                  tGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTAt                            >  1:4246005/1‑93 (MQ=255)

                                                                     tGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTAc                         >  2:5814202/1‑93 (MQ=255)

                                                                      gCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACg                        >  1:2474995/1‑93 (MQ=255)

                                                                       ccATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGc                       <  2:4387909/93‑1 (MQ=255)

                                                                       ccATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGc                       <  1:3243329/93‑1 (MQ=255)

                                                                       ccATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGc                       >  2:7486750/1‑93 (MQ=255)

                                                                         aTTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAg                     >  2:5792805/1‑93 (MQ=255)

                                                                         aTTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAg                     >  2:3516789/1‑93 (MQ=255)

                                                                          ttCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCCGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAGt                    >  2:4775459/1‑93 (MQ=255)

                                                                          ttCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAGt                    >  2:6036188/1‑93 (MQ=255)

                                                                          ttCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAGt                    >  1:3036402/1‑93 (MQ=255)

                                                                          ttCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAGt                    >  1:3846421/1‑93 (MQ=255)

                                                                          ttCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAGt                    >  1:845274/1‑93 (MQ=255)

                                                                            cTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAGTCa                  <  2:633610/93‑1 (MQ=255)

                                                                             tATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAGTCAg                 >  1:6078723/1‑93 (MQ=255)

                                                                              aTTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAGTCAgg                <  1:2367803/93‑1 (MQ=255)

                                                                                   aggaaggaGTGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAGTCAGGTACtt           <  1:5790458/93‑1 (MQ=255)

                                                                                    ggaaggaGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAGTCAGGTACTTg          >  2:5959412/1‑93 (MQ=255)

                                                                                          aGTGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAGTCAGGTACTTGAGCTAc    <  1:4688461/93‑1 (MQ=255)

CTGACAGCTTCGGCTTTGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGTGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAGTCAGGTACTTGAGCTACAT  >  NC_000913/4506458‑4506642

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`