| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,527,603 | A→G | L70P (CTA→CCA) | sgcC ← | putative PTS system enzyme IIC component |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,527,603 | 0 | A | G | 83.2% | 692.4 / 143.6 | 322 | L70P (CTA→CCA) | sgcC | putative PTS system enzyme IIC component |
| Reads supporting (aligned to +/- strand): ref base A (27/27); new base G (149/119); total (176/146) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.58e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.01e-01 | |||||||||||
Only 100 of 324 total aligned reads displayed.
AAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCGACAAAACCAATCCCA > NC_000913/4527513‑4527695 | aaaaTAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTggg > 1:2810817/1‑93 (MQ=255) aaaTAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTGGGc > 2:6681338/1‑93 (MQ=255) tAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTGGGCCGa < 1:1764539/93‑1 (MQ=255) cTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTGGGCCGAAAc > 1:734920/1‑93 (MQ=255) cTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTGGGCCGAAAc > 2:6151523/1‑93 (MQ=255) cTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAAc < 1:1024600/93‑1 (MQ=255) cTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAAc < 2:5365702/93‑1 (MQ=255) tGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTGGGCCGAAACg > 1:3112931/1‑93 (MQ=255) ggATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTGGGCCGAAACGCt > 2:4896749/1‑93 (MQ=255) tAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTGGGCCGAAACGCTCaa > 2:4604091/1‑93 (MQ=255) aaTCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTGGGCCGAAACGCTCAat < 2:2345918/93‑1 (MQ=255) aaTCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTGGGCCGAAACGCTCAat < 2:1237595/93‑1 (MQ=255) aTCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTGGGCCGAAACGCTCAatc > 1:3339938/1‑93 (MQ=255) aTCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTGGGCCGAAACGCTCAatc > 2:1559924/1‑93 (MQ=255) tCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTGGGCCGAAACGCTCAatca < 2:2889549/93‑1 (MQ=255) tCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTGGGCCGAAACGCTCAatca > 1:5467950/1‑93 (MQ=255) tCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTGGGCCGAAACGCTCAatca < 1:3213585/93‑1 (MQ=255) aTGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAatcatc > 2:2026639/1‑93 (MQ=255) ggCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTGGGCCGAAACGCTCAATCATCAc < 2:5669778/93‑1 (MQ=255) gcgcCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTGGGCCGAAACGCTCAATCATCACt > 1:5864129/1‑93 (MQ=255) cgcCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTGGGCCGAAACGCTCAATCATCACtt < 1:6885410/93‑1 (MQ=255) gcCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTGGGCCGAAACGCTCAATCATCACttt > 2:6910687/1‑93 (MQ=255) ccAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTGGGCCGAAACGCTCAATCATCACTTTg > 2:748064/1‑93 (MQ=255) ccAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTGGGCCGAAACGCTCAATCATCACTTTg > 1:6569949/1‑93 (MQ=255) cAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTGGGCCGAAACGCTCAATCATCACTTTGa > 1:3805958/1‑93 (MQ=255) cAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTGGGCCGAAACGCTCAATCATCACTTTGa < 1:1290325/93‑1 (MQ=255) cAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTGGGCCGAAACGCTCAATCATCACTTTGa > 2:4125135/1‑93 (MQ=255) cAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGa < 1:4553787/93‑1 (MQ=255) aaTGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGAt > 1:2924874/1‑93 (MQ=255) aTGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTGGGCCGAAACGCTCAATCATCACTTTGATa < 1:3281962/93‑1 (MQ=255) tGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTGGGCCGAAACGCTCAATCATCACTTTGATAg > 2:3174816/1‑93 (MQ=255) tGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTGGGCCGAAACGCTCAATCATCACTTTGATAg > 2:2679855/1‑93 (MQ=255) tGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTGGGCCGAAACGCTCAATCATCACTTTGATAg > 2:4801918/1‑93 (MQ=255) ggCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTGGGCCGAAACGCTCAATCATCACTTTGATAgg < 1:1584525/93‑1 (MQ=255) ggCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTGGGCCGAAACGCTCAATCATCACTTTGATAgg < 1:2083153/93‑1 (MQ=255) gCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTGGGCCGAAACGCTCAATCATCACTTTGATAggg < 1:4042641/93‑1 (MQ=255) cTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTGGGCCGAAACGCTCAATCATCACTTTGATAgggg < 1:5914972/93‑1 (MQ=255) cTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTGGGCCGAAACGCTCAATCATCACTTTGATAgggg > 2:7117273/1‑93 (MQ=255) gTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGa < 1:6251992/93‑1 (MQ=255) cATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTGGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGa > 1:4794890/1‑93 (MQ=255) cATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTGGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGa < 2:5759826/93‑1 (MQ=255) cATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTGGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGa < 1:926330/93‑1 (MQ=255) tAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTGGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAgg > 2:3842062/1‑93 (MQ=255) tAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTGGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAgg > 1:4310052/1‑93 (MQ=255) aaCCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTGGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGc > 2:4182600/1‑93 (MQ=255) aCCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTGGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCt > 2:5460075/1‑93 (MQ=255) ccAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTGGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTg > 1:2573105/1‑93 (MQ=255) ccAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTGGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTg < 1:7267081/93‑1 (MQ=255) cAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTGGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGt > 1:4230467/1‑93 (MQ=255) aaCGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTGGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTc < 2:3058145/93‑1 (MQ=255) aaCGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTGGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTc < 1:7125035/93‑1 (MQ=255) aaCGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTGGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTc > 2:5260753/1‑93 (MQ=255) aaCGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTGGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTc < 1:2220613/93‑1 (MQ=255) aaCGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTGGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTc > 2:894171/1‑93 (MQ=255) aCGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTGGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCg > 1:3550573/1‑93 (MQ=255) gCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGAt < 1:6776830/93‑1 (MQ=255) gCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTGGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATg > 1:2438724/1‑93 (MQ=255) cAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTGGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGa < 1:6671057/93‑1 (MQ=255) aGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTGGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGAc > 2:2411634/1‑93 (MQ=255) gggCCTGCGCCAACGTCAAAGACATGCAGGGCTGGGCCGAAACGCTCAATCATCACTTTGATAGGGGGGCTGAGGCTGTCGATCGCCATGACg > 2:139423/1‑93 (MQ=255) ggCCTGCGCCAACGTCAAAGACATGCAGGGCTGGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGa < 2:5176431/93‑1 (MQ=255) ggCCTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGa < 2:4470463/93‑1 (MQ=255) ggCCTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGa > 2:7031974/1‑93 (MQ=255) gCCTGCGCCAACGTCAAAGACATGCAGGGCTGGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGAt < 1:5317710/93‑1 (MQ=255) gCCTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGAt < 2:2208141/93‑1 (MQ=255) cTGCGCCAACGTCAAAGACATGCAGGGCTGGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCa < 1:4948686/93‑1 (MQ=255) cTGCGCCAACGTCAAAGACATGCAGGGCTGGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCa > 2:6748882/1‑93 (MQ=255) tGCGCCAACGTCAAAGACATGCAGGGCTGGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCAc > 2:7365740/1‑93 (MQ=255) gcgcCAACGTCAAAGACATGCAGGGCTGGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCAcc < 2:5073283/93‑1 (MQ=255) cgcCACCGTAAAAGACAGGCGGGGCGGGGCCAAACCGCTAAATCATCCTTTTGAGGGGGGGACGGGGGCTGTCGACCGCCATGACGATCACCa < 1:5110568/93‑1 (MQ=255) cgcCAACGTCAAAGACATGCAGGGCTGGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCa < 2:600627/93‑1 (MQ=255) cgcCAACGTCAAAGACATGCAGGGCTGGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCa < 1:2296434/93‑1 (MQ=255) gcCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAg < 1:6391910/93‑1 (MQ=255) ccAACGTCAAAGACATGCAGGGCTGGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGt > 1:1938007/1‑93 (MQ=255) ccAACGTCAAAGACATGCAGGGCTGGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGt > 2:2562784/1‑93 (MQ=255) ccAACGTCAAAGACATGCAGGGCTGGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGt > 1:3995572/1‑93 (MQ=255) ccAACGTCAAAGACATGCAGGGCTGGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGt < 1:1232251/93‑1 (MQ=255) cAACGTCAAAGACATGCAGGGCTGGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTc > 2:6276736/1‑93 (MQ=255) cAACGTCAAAGACATGCAGGGCTGGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTc > 2:1753937/1‑93 (MQ=255) cAACGTCAAAGACATGCAGGGCTGGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTc < 1:2642920/93‑1 (MQ=255) cAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTc > 1:4848257/1‑93 (MQ=255) cAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTc < 2:4071670/93‑1 (MQ=255) aaCGTCAAAGACATGCAGGGCTGGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTcc > 2:3370135/1‑93 (MQ=255) tCAAAGACATGCAGGGCTGGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATa < 1:4096603/93‑1 (MQ=255) tCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATa < 1:6075873/93‑1 (MQ=255) tCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATa < 2:7079651/93‑1 (MQ=255) aaGACATGCAGGGCTGGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCg > 2:3003228/1‑93 (MQ=255) aaGACATGCAGGGCTGGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCg < 1:1535917/93‑1 (MQ=255) aaGACATGCAGGGCTGGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCg > 1:6472081/1‑93 (MQ=255) gACATGCAGGGCTGGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCGAc > 2:1896172/1‑93 (MQ=255) gACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCGAc < 1:3633102/93‑1 (MQ=255) cATGCAGGGCTGGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCGACaa > 2:1651866/1‑93 (MQ=255) tGCAGGGCTGGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCGACaaaa < 2:2786900/93‑1 (MQ=255) gCAGGGCTGGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCGACAAAAc < 1:5048958/93‑1 (MQ=255) gCAGGGCTGGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCGACAAAAc < 2:7167417/93‑1 (MQ=255) cAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCGACAAAAcc < 2:944273/93‑1 (MQ=255) gggCTGGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCGACAAAACCaa < 1:352307/93‑1 (MQ=255) gggCTGGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCGACAAAACCaa > 1:113473/1‑93 (MQ=255) gCTGGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCGACAAAACCAATc < 2:2073188/93‑1 (MQ=255) cTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCGACAAAACCAATcc > 1:1366656/1‑93 (MQ=255) | AAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGATCACCAGTCCCATACCGACAAAACCAATCCCA > NC_000913/4527513‑4527695 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |