| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 559,101 | A→G | N61S (AAT→AGT) | sfmD → | putative outer membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 559,101 | 0 | A | G | 85.3% | 643.2 / 99.8 | 272 | N61S (AAT→AGT) | sfmD | putative outer membrane protein |
| Reads supporting (aligned to +/- strand): ref base A (15/25); new base G (126/106); total (141/131) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.96e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.69e-02 | |||||||||||
Only 100 of 284 total aligned reads displayed.
CTTTTTAAGCTATGCGGAAAGTTATTTCAACCCGGCATTTTTATTAGAGAATGGCACATCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAATCATCAACCTGCGGGCGTGTATCGGGTGGATCTCTGGCGTAATGATGAGTTCATTGGTTCGCAGGATATCGTATTTGAATCGACAACAGAA > NC_000913/559009‑559192 | ctTTTTAAGCTATGCGGAAAGTTATTTCAACCCGGCATTTTTATTAGAGAATGGCACATCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTaa < 2:5948892/93‑1 (MQ=255) tttttAAGCTATGCGGAAAGTTATTTCAACCCGGCATTTTTATTAGAGAATGGCACATCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAat > 2:955769/1‑93 (MQ=255) tttAAGCTATGCGGAAAGTTATTTCAACCCGGCATTTTTATTAGAGAATGGCACATCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAgtca < 2:5083075/93‑1 (MQ=255) ttAAGCTATGCGGAAAGTTATTTCAACCCGGCATTTTTATTAGAGAATGGCACATCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAatcat > 2:2392792/1‑93 (MQ=255) tAAGCTATGCGGAAAGTTATTTCAACCCGGCATTTTTATTAGAGAATGGCACATCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAgtcatc > 1:6168700/1‑93 (MQ=255) aaGCTATGCGGAAAGTTATTTCAACCCGGCATTTTTATTAGAGAATGGCACATCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAGtcatca > 1:6994414/1‑93 (MQ=255) cTATGCGGAAAGTTATTTCAACCCGGCATTTTTATTAGAGAATGGCACATCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAGTCATCAAcc < 2:4317818/93‑1 (MQ=255) cTATGCGGAAAGTTATTTCAACCCGGCATTTTTATTAGAGAATGGCACATCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAGTCATCAAcc < 1:5818297/93‑1 (MQ=255) aTGCGGAAAGTTATTTCAACCCGGCATTTTTATTAGAGAATGGCACATCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAATCATCAACCTg < 2:5626178/93‑1 (MQ=255) ggAAAGTTATTTCAACCCGGCATTTTTATTAGAGAATGGCACATCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAGTCATCAACCTGCggg > 1:2774301/1‑93 (MQ=255) gAAAGTTATTTCAACCCGGCATTTTTATTAGAGAATGGCACATCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAGTCATCAACCTGCGGGc > 2:1537148/1‑93 (MQ=255) gAAAGTTATTTCAACCCGGCATTTTTATTAGAGAATGGCACATCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAGTCATCAACCTGCGGGc > 2:2442210/1‑93 (MQ=255) gAAAGTTATTTCAACCCGGCATTTTTATTAGAGAATGGCACATCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAGTCATCAACCTGCGGGc > 2:1681222/1‑93 (MQ=255) gAAAGTTATTTCAACCCGGCATTTTTATTAGAGAATGGCACATCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAGTCATCAACCTGCGGGc > 1:1113090/1‑93 (MQ=255) gAAAGTTATTTCAACCCGGCATTTTTATTAGAGAATGGCACATCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAGTCATCAACCTGCGGGc > 1:644994/1‑93 (MQ=255) gAAAGTTATTTCAACCCGGCATTTTTATTAGAGAATGGCACATCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAGTCATCAACCTGCGGGc < 1:2545191/93‑1 (MQ=255) gAAAGTTATTTCAACCCGGCATTTTTATTAGAGAATGGCACATCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAGTCATCAACCTGCGGGc > 1:3638475/1‑93 (MQ=255) aaaGTTATTTCAACCCGGCATTTTTATTAGAGAATGGCACATCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAGTCATCAACCTGCGGGCg > 1:3073164/1‑93 (MQ=255) aaaGTTATTTCAACCCGGCATTTTTATTAGAGAATGGCACATCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAGTCATCAACCTGCGGGCg > 2:4345529/1‑93 (MQ=255) aaGTTATTTCAACCCGGCATTTTTATTAGAGAATGGCACATCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAGTCATCAACCTGCGGGCgt > 2:7422556/1‑93 (MQ=255) aGTTATTTCAACCCGGCATTTTTATTAGAGAATGGCACATCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAGTCATCAACCTGCGGGCgtg > 2:807662/1‑93 (MQ=255) aGTTATTTCAACCCGGCATTTTTATTAGAGAATGGCACATCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAGTCATCAACCTGCGGGCggg > 2:5429993/1‑91 (MQ=255) gTTATTTCAACCCGGCATTTTTATTAGAGAATGGCACATCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAGTCATCAACCTGCGGGCgtgt < 2:2847276/93‑1 (MQ=255) gTTATTTCAACCCGGCATTTTTATTAGAGAATGGCACATCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAATCATCAACCTGCGGGCgtgt > 1:3717246/1‑93 (MQ=255) tATTTCAACCCGGCATTTTTATTAGAGAATGGCACATCCGTTCCTGATTTATCGCGCTTTGAGAGAGGTAATCATCAACCTGCGGGCGTGTAt < 1:7371506/93‑1 (MQ=255) aTTTCAACCCGGCATTTTTATTAGAGAATGGCACATCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAGTCATCAACCTGCGGGCGTGTATc < 2:3028692/93‑1 (MQ=255) aTTTCAACCCGGCATTTTTATTAGAGAATGGCACATCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAGTCATCAACCTGCGGGCGTGTATc < 2:4922211/93‑1 (MQ=255) tttCAACCCGGCATTTTTATTAGAGAATGGCACATCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAGTCATCAACCTGCGGGCGTGTATCg < 1:7493602/93‑1 (MQ=255) tttCAACCCGGCATTTTTATTAGAGAATGGCACATCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAGTCATCAACCTGCGGGCGTGTATCg > 2:3238740/1‑93 (MQ=255) tttCAACCCGGCATTTTTATTAGAGAATGGCACATCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAGTCATCAACCTGCGGGCGTGTATCg < 1:1427519/93‑1 (MQ=255) ttCAACCCGGCATTTTTATTAGAGAATGGCACATCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAGTCATCAACCTGCGGGCGTGTATCgg < 2:6845398/93‑1 (MQ=255) ttCAACCCGGCATTTTTATTAGAGAATGGCACATCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAGTCATCAACCTGCGGGCGTGTATCgg < 1:484014/93‑1 (MQ=255) cAACCCGGCATTTTTATTAGAGAATGGCACATCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAGTCATCAACCTGCGGGCGTGTATCGGGt < 1:5426098/93‑1 (MQ=255) cAACCCGGCATTTTTATTAGAGAATGGCACATCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAGTCATCAACCTGCGGGCGTGTATCGGGt < 1:4224687/93‑1 (MQ=255) aaCCCGGCATTTTTATTAGAGAATGGCACATCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAGTCATCAACCTGCGGGCGTGTATCGGGTg > 1:4174094/1‑93 (MQ=255) aaCCCGGCATTTTTATTAGAGAATGGCACATCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAGTCATCAACCTGCGGGCGTGTATCGGGTg < 2:7471282/93‑1 (MQ=255) aaCCCGGCATTTTTATTAGAGAATGGCACATCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAGTCATCAACCTGCGGGCGTGTATCGGGTg < 2:5325568/93‑1 (MQ=255) aaCCCGGCATTTTTATTAGAGAATGGCACATCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAGTCATCAACCTGCGGGCGTGTATCGGGTg < 1:1509701/93‑1 (MQ=255) aaCCCGGCATTTTTATTAGAGAATGGCACATCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAATCATCAACCTGCGGGCGTGTATCGGGTg > 2:4810763/1‑93 (MQ=255) aCCCGGCATTTTTATTAGAGAATGGCACATCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAGTCATCAACCTGCGGGCGTGTATCGGGTgg > 2:4060228/1‑93 (MQ=255) aCCCGGCATTTTTATTAGAGAATGGCACATCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAGTCATCAACCTGCGGGCGTGTATCGGGTgg > 2:3971954/1‑93 (MQ=255) aCCCGGCATTTTTATTAGAGAATGGCACATCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAATCATCAACCTGCGGGCGTGTATCGGGTgg > 1:1682278/1‑93 (MQ=255) cccGGCATTTTTATTAGAGAATGGCACATCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAGTCATCAACCTGCGGGCGTGTATCGGGTGGa > 1:631094/1‑93 (MQ=255) cccGGCATTTTTATTAGAGAATGGCACATCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAGTCATCAACCTGCGGGCGTGTATCGGGTGGa > 1:2881105/1‑93 (MQ=255) ccGGCATTTTTATTAGAGAATGGCACATCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAGTCATCAACCTGCGGGCGTGTATCGGGTGGAt > 1:3359969/1‑93 (MQ=255) cGGCATTTTTATTAGAGAATGGCACATCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAGTCATCAACCTGCGGGCGTGTATCGGGTGGAtc > 2:3926192/1‑93 (MQ=255) ggCATTTTTATTAGAGAATGGCACATCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAGTCATCAACCTGCGGGCGTGTATCGGGTGGAtct > 2:1619241/1‑93 (MQ=255) ggCATTTTTATTAGAGAATGGCACATCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAGTCATAAACCTGCGGGCGTGTATCGGGTGGAtct > 2:715670/1‑93 (MQ=255) cATTTTTATTAGAGAATGGCACATCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAGTCATCAACCTGCGGGCGTGTATCGGGTGGATctct > 1:687235/1‑93 (MQ=255) aTTTTTATTAGAGAATGGCACATCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAGTCATCAACCTGCGGGCGTGTATCGGGTGGATCTCTg > 1:6599890/1‑93 (MQ=255) aTTTTTATTAGAGAATGGCACATCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAGTCATCAACCTGCGGGCGTGTATCGGGTGGATCTCTg > 1:5037790/1‑93 (MQ=255) aTTTTTATTAGAGAATGGCACATCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAATCATCAACCTGCGGGCGTGTATCGGGTGGATCTCTg < 2:7075120/93‑1 (MQ=255) tttATTAGAGAATGGCACATCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAGTCATCAACCTGCGGGCGTGTATCGGGTGGATCTCTGGCg < 2:5683971/93‑1 (MQ=255) ttaGAGAATGGCACATCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAGTCATCAACCTGCGGGCGTGTATCGGGTGGATCTCTGGCGTAat > 2:2304964/1‑93 (MQ=255) ttaGAGAATGGCACATCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAGTCATCAACCTGCGGGCGTATATCGGGTGGATCTCTGGCGTAat < 1:474698/93‑1 (MQ=255) agagAATGGCACATCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAATCATCAACCTGCGGGCGTGTATCGGGTGGATCTCTGGCGTAatga < 1:4241086/93‑1 (MQ=255) gagaATGGCACATCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAGTCATCAACCTGCGGGCGTGTATCGGGTGGATCTCTGGCGTAatgat < 1:6779519/93‑1 (MQ=255) gaATGGCACATCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAGTCATCAACCTGCGGGCGTGTATCGGGTGGATCTCTGGCGTAAtgatga > 2:3451970/1‑93 (MQ=255) gaATGGCACATCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAGTCATCAACCTGCGGGCGTGTATCGGGTGGATCTCTGGCGTAAtgatga < 1:2324723/93‑1 (MQ=255) aaTGGCACATCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAATCATCAACCTGCGGGCGTGTATCGGGTGGATCTCTGGCGTAATGATGAg < 2:2074679/93‑1 (MQ=255) aTGGCACATCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAATCATCAACCTGCGGGCGTGTATCGGGTGGATCTCTGGCGTAATGATGAGt < 2:4715294/93‑1 (MQ=255) tGGCACATCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAGTCATCAACCTGCGGGCGTGTATCGGGTGGATCTCTGGCGTAATGATGAGtt > 2:1912558/1‑93 (MQ=255) tGGCACATCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAGTCATCAACCTGCGGGCGTGTATCGGGTGGATCTCTGGCGTAATGATGAGtt < 1:546703/93‑1 (MQ=255) gCACATCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAGTCATCAACCTGCGGGCGTGTATCGGGTGGATCTCTGGCGTAATGATGAGTTCa < 2:1010659/93‑1 (MQ=255) cacaTCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAGTCATCAACCTGCGGGCGTGTATCGGGTGGATCTCTGGCGTAATGATGAGTTCAt > 1:3853335/1‑93 (MQ=255) cacaTCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAGTCATCAACCTGCGGGCGTGTATCGGGTGGATCTCTGGCGTAATGATGAGTTCAt < 1:2078693/93‑1 (MQ=255) caTCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAGTCATCAACCTGCGGGCGTGTATCGGGTGGATCTCTGGCGTAATGATGAGTTCATTg > 1:1265570/1‑93 (MQ=255) caTCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAGTCATCAACCTGCGGGCGTGTATCGGGTGGATCTCTGGCGTAATGATGAGTTCATTg < 2:2618602/93‑1 (MQ=255) ccGTTGCTGATTTATCGCGCTTTGAGAGAGGTAGTCATCAACCTGCGGGCGTGTATCGGGTGGATCTCTGGCGTAATGATGAGTTCATTGGtt > 1:1866905/1‑93 (MQ=255) cGTTGCTGATTTATCGCGCTTTGAGAGAGGTAGTCATCAACCTGCGGGCGTGTATCGGGTGGATCTCTGGCGTAATGATGAGTTCATTGGTTc > 2:121993/1‑93 (MQ=255) ttGCTGATTTATCGCGCTTTGAGAGAGGTAGTCATCAACCTGCGGGCGTGTATCGGGTGGATCTCTGGCGTAATGATGAGTTCATTGGTTCGc > 1:7178068/1‑93 (MQ=255) ttGCTGATTTATCGCGCTTTGAGAGAGGTAGTCATCAACCTGCGGGCGTGTATCGGGTGGATCTCTGGCGTAATGATGAGTTCATTGGTTCGc > 2:7294973/1‑93 (MQ=255) ttGCTGATTTATCGCGCTTTGAGAGAGGTAGTCATCAACCTGCGGGCGTGTATCGGGTGGATCTCTGGCGTAATGATGAGTT‑ATTGGTTCGCa > 1:4732273/1‑93 (MQ=255) tGCTGATTTATCGCGCTTTGAGAGAGGTAGTCATCAACCTGCGGGCGTGTATCGGGTGGATCTCTGGCGTAATGATGAGTTCATTGGTTCGCa < 1:4023311/93‑1 (MQ=255) tGATTTATCGCGCTTTGAGAGAGGTAGTCATCAACCTGCGGGCGTGTATCGGGTGGATCTCTGGCGTAATGATGAGTTCATTGGTTCGCAGGa > 2:2503489/1‑93 (MQ=255) tGATTTATCGCGCTTTGAGAGAGGTAGTCATCAACCTGCGGGCGTGTATCGGGTGGATCTCTGGCGTAATGATGAGTTCATTGGTTCGCAGGa < 1:5741676/93‑1 (MQ=255) tGATTTATCGCGCTTTGAGAGAGGTAGTCATCAACCTGCGGGCGTGTATCGGGTGGATCTCTGGCGTAATGATGAGTTCATTGGTTCGCAGGa < 2:6759694/93‑1 (MQ=255) tGATTTATCGCGCTTTGAGAGAGGTAGTCATCAACCTGCGGGCGTGTATCGGGTGGATCTCTGGCGTAATGATGAGTTCATTGGTTCGCAGGa < 1:2266842/93‑1 (MQ=255) tGATTTATCGCGCTTTGAGAGAGGTAGTCATCAACCTGCGGGCGTGTATCGGGTGGATCTCTGGCGTAATGATGAGTTCATTGGTTCGCAGGa < 2:107122/93‑1 (MQ=255) gATTTATCGCGCTTTGAGAGAGGTAGTCATCAACCTGCGGGCGTGTATCGGGTGGATCTCTGGCGTAATGATGAGTTCATTGGTTCGCAGGat < 2:3690986/93‑1 (MQ=255) gATTTATCGCGCTTTGAGAGAGGTAGTCATCAACCTGCGGGCGTGTATCGGGTGGATCTCTGGCGTAATGATGAGTTCATTGGTTCGCAGGat > 2:6326024/1‑93 (MQ=255) aTTTATCGCGCTTTGAGAGAGGTAATCATCAACCTGCGGGCGTGTATCGGGTGGATCTCTGGCGTAATGATGAGTTCATTGGTTCGCAGGata < 1:393679/93‑1 (MQ=255) tttATCGCGCTTTGAGAGAGGTAGTCATCAACCTGCGGGCGTGTATCGGGTGGATCTCTGGCGTAATGATGAGTTCATTGGTTCGCAGGatat > 2:4631955/1‑93 (MQ=255) tATCGCGCTTTGAGAGAGGTAGTCATCAACCTGCGGGCGTGTATCGGGTGGATCTCTGGCGTAATGATGAGTTCATTGGTTCGCAGGATATCg < 2:3882652/93‑1 (MQ=255) tATCGCGCTTTGAGAGAGGTAGTCATCAACCTGCGGGCGTGTATCGGGTGGATCTCTGGCGTAATGATGAGTTCATTGGTTCGCAGGATATCg > 2:2335932/1‑93 (MQ=255) tCGCGCTTTGAGAGAGGTAGTCATCAACCTGCGGGCGTGTATCGGGTGGATCTCTGGCGTAATGATGAGTTCATTGGTTCGCAGGATATCGTa > 2:5876071/1‑93 (MQ=255) cgcTTTGAGAGAGGTAGTCATCAACCTGCGGGCGTGTATCGGGTGGATCTCTGGCGTAATGATGAGTTCATTGGTTCGCAGGATATCGTAttt < 1:5777201/93‑1 (MQ=255) gcTTTGAGAGAGGTAGTCATCAACCTGCGGGCGTGTATCGGGTGGATCTCTGGCGTAATGATGAGTTCATTGGTTCGCAGGATATCGTATTTg > 2:6626407/1‑93 (MQ=255) tttGAGAGAGGTAGTCATCAACCTGCGGGCGTGTATCGGGTGGATCTCTGGCGTAATGATGAGTTCATTGGTTCGCAGGATATCGTATTTGaa < 1:6051999/93‑1 (MQ=255) tttGAGAGAGGTAGTCATCAACCTGCGGGCGTGTATCGGGTGGATCTCTGGCGTAATGATGAGTTCATTGGTTCGCAGGATATCGTATTTGaa > 1:803642/1‑93 (MQ=255) tttGAGAGAGGTAGTCATCAACCTGCGGGCGTGTATCGGGTGGATCTCTGGCGTAATGATGAGTTCATTGGTTCGCAGGATATCGTATTTGaa < 1:2025530/93‑1 (MQ=255) tttGAGAGAGGTAGTCATCAACCTGCGGGCGTGTATCGGGTGGATCTCTGGCGTAATGATGAGTTCATTGGTTCGCAGGATATCGTATTTGaa < 2:759938/93‑1 (MQ=255) ttGAGAGAGGTAGTCATCAACCTGCGGGCGTGTATCGGGTGGATCTCTGGCGTAATGATGAGTTCATTGGTTCGCAGGATATCGTATTTGAAt < 1:5532408/93‑1 (MQ=255) gagagGTAGTCATCAACCTGCGGGCGTGTATCGGGTTGATCTCTGGCGTAATGATGAGTTCATTGGTTCGCAGGATATCGTATTTGAATCGac < 2:6252088/93‑1 (MQ=255) agagGTAGTCATCAACCTGCGGGCGTGTATCGGGTGGATCTCTGGCGTAATGATGAGTTCATTGGTTCGCAGGATATCGTATTTGAATCGaca < 2:4411858/93‑1 (MQ=255) gagGTAATCATCAACCTGCGGGCGTGTATCGGGTGGATCTCTGGCGTAATGATGAGTTCATTGGTTCGCAGGATATCGTATTTGAATCGacaa < 2:2230973/93‑1 (MQ=255) agGTAGTCATCAACCTGCGGGCGTGTATCGGGTGGATCTCTGGCGTAATGATGAGTTCATTGGTTCGCAGGATATCGTATTTGAATCGacaac < 2:4512329/93‑1 (MQ=255) ggTAGTCATCAACCTGCGGGCGTGTATCGGGTGGATCTCTGGCGTAATGATGAGTTCATTGGTTCGCAGGATATCGTATTTGAATCGacaaca > 1:437562/1‑93 (MQ=255) ggTAGTCATCAACCTGCGGGCGTGTATCGGGTGGATCTCTGGCGTAATGATGAGTTCATTGGTTCGCAGGATATCGTATTTGAATCGacaaca < 1:3745680/93‑1 (MQ=255) gTAATCATCAACCTGCGGGCGTGTATCGGGTGGATCTCTGGCGTAATGATGAGTTCATTGGTTCGCAGGATATCGTATTTGAATCGACAACAg > 2:3852874/1‑93 (MQ=255) | CTTTTTAAGCTATGCGGAAAGTTATTTCAACCCGGCATTTTTATTAGAGAATGGCACATCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAATCATCAACCTGCGGGCGTGTATCGGGTGGATCTCTGGCGTAATGATGAGTTCATTGGTTCGCAGGATATCGTATTTGAATCGACAACAGAA > NC_000913/559009‑559192 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |