| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,944,676 | 2 bp→GC | intergenic (+20/+75) | trpT → / ← yifDA | tRNA‑Trp/transcription regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,944,676 | 0 | C | G | 99.5% | 1498.9 / NA | 438 | intergenic (+20/+76) | trpT/yifDA | tRNA‑Trp/transcription regulator |
| Reads supporting (aligned to +/- strand): ref base C (0/2); new base G (200/236); total (200/238) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.03e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| * | NC_000913 | 3,944,677 | 0 | G | C | 99.5% | 1496.3 / NA | 438 | intergenic (+21/+75) | trpT/yifDA | tRNA‑Trp/transcription regulator |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base C (200/236); minor base T (0/2); total (200/238) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.03e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 438 total aligned reads displayed.
GTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGC‑GAAACGTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACTTCA > NC_000913/3944590‑3944764 || gTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAgg > 2:2845619/1‑93 (MQ=255) ttCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGa < 1:3287775/93‑1 (MQ=255) ttCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGa > 1:300887/1‑93 (MQ=255) ttCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGa < 2:5469318/93‑1 (MQ=255) tCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑t < 2:2413055/93‑1 (MQ=255) cAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑tt > 1:4810242/1‑93 (MQ=255) cAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑tt < 2:4416904/93‑1 (MQ=255) cAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑tt < 1:2584763/93‑1 (MQ=255) aaTTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAATGA‑ttt < 1:6688893/93‑1 (MQ=255) aTTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑tttt < 1:45642/93‑1 (MQ=255) aTTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑tttt < 2:5611274/93‑1 (MQ=255) aTTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑tttt < 2:1932642/93‑1 (MQ=255) ttGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑ttttt > 2:2330838/1‑93 (MQ=255) gTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑tttttttt < 1:4385284/93‑1 (MQ=255) tAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTa < 2:7445415/93‑1 (MQ=255) tAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTa < 1:6540396/93‑1 (MQ=255) tAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTa < 1:6279368/93‑1 (MQ=255) tAGAGCACCGAGCTCCAAATCCGGGTGTTGGGATTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTATGGA‑TTTTTTTTa < 1:5711550/93‑1 (MQ=255) agagCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTAt < 1:6946042/93‑1 (MQ=255) agagCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTAt < 2:2256457/93‑1 (MQ=255) agagCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTAt < 2:3457950/93‑1 (MQ=255) gagCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATc > 2:5106902/1‑93 (MQ=255) gagCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCCTAGC‑GAAAGCTAAGGA‑TTTTTTTTATc < 2:6425194/93‑1 (MQ=255) agCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCt < 2:2909325/93‑1 (MQ=255) gCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTg < 2:1342065/93‑1 (MQ=255) cACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGa < 2:2031285/93‑1 (MQ=255) aCCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGaa > 2:1562765/1‑93 (MQ=255) aCCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGaa < 1:3877133/93‑1 (MQ=255) ccGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGaaa > 2:4069049/1‑93 (MQ=255) ccGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGaaa < 1:2801220/93‑1 (MQ=255) ccGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGaaa < 1:7138107/93‑1 (MQ=255) ggTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGAAATa < 2:26670/93‑1 (MQ=255) gTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGAAATaa > 1:4961846/1‑93 (MQ=255) gTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGAAATaa > 2:778839/1‑93 (MQ=255) tctcCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGAAATAAc > 2:3921579/1‑93 (MQ=255) tctcCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGAAATAAc > 2:4716661/1‑93 (MQ=255) tcCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGAAATAAccc > 1:7332162/1‑93 (MQ=255) ccAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCct < 1:7398037/93‑1 (MQ=255) cAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCctc > 1:1007735/1‑93 (MQ=255) cAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCctc > 2:6681178/1‑93 (MQ=255) aaaaCCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCctct > 1:3467755/1‑93 (MQ=255) aaCCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTcc < 2:3387999/93‑1 (MQ=255) aaCCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTcc < 1:3964246/93‑1 (MQ=255) gggTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAg > 1:5521024/1‑93 (MQ=255) ggTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGATTTTTTTTTTTTTGAAAAAACCCCTCCCGAAg > 1:6195926/1‑93 (MQ=255) gtgtTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTa > 2:6362306/1‑93 (MQ=255) nntGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTaaa < 1:3716809/91‑1 (MQ=255) gtTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTaaa < 2:4811182/93‑1 (MQ=255) ttGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAAt < 2:6867640/93‑1 (MQ=255) ttGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAAt < 2:7174741/93‑1 (MQ=255) ttGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAAt < 1:7472360/93‑1 (MQ=255) ttGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAAt < 1:1271339/93‑1 (MQ=255) gggAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATcc < 1:4730061/93‑1 (MQ=255) ggAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCt > 2:5262873/1‑93 (MQ=255) ggAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCt < 1:298069/93‑1 (MQ=255) aGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTc < 2:1029174/93‑1 (MQ=255) aGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTc < 1:1696482/93‑1 (MQ=255) gTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCt > 2:1703465/1‑93 (MQ=255) ttCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTa < 2:3876103/93‑1 (MQ=255) tCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTAc < 1:2015940/93‑1 (MQ=255) cGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTAcc < 2:5892373/93‑1 (MQ=255) cGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTAcc < 2:114455/93‑1 (MQ=255) gAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCg > 1:1491277/1‑93 (MQ=255) gAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCg > 2:7287099/1‑93 (MQ=255) gTCTCTCCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGc < 2:2773084/93‑1 (MQ=255) tctctcCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCa < 2:5815467/93‑1 (MQ=255) tctctcCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCa > 2:4148619/1‑93 (MQ=255) tctctcCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCa > 2:610916/1‑93 (MQ=255) tctcCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATc < 1:6094176/93‑1 (MQ=255) tcCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCt < 1:175643/93‑1 (MQ=255) tcCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCt < 1:5424542/93‑1 (MQ=255) tcCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCt > 2:655845/1‑93 (MQ=255) tcCGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCt > 1:3783785/1‑93 (MQ=255) tcCCCCCCTGCCAAAAATCCACCTTAGCGGAAACTAAAGGT‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATcc < 1:6375446/93‑1 (MQ=255) cGCCCCTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTg > 1:5907044/1‑93 (MQ=255) ccccTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTgcc < 1:1601951/93‑1 (MQ=255) ccccTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTgcc < 2:5067031/93‑1 (MQ=255) cccTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTgcca < 1:2046072/93‑1 (MQ=255) cccTGCCAAAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTgcca < 1:4132887/93‑1 (MQ=255) ccTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTgccag > 1:4482703/1‑93 (MQ=255) ccTGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTgccag > 2:2566210/1‑93 (MQ=255) tGCCAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTgccagcc > 2:426081/1‑93 (MQ=255) ccAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCAt < 1:2403913/93‑1 (MQ=255) cAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCAtt < 2:4939509/93‑1 (MQ=255) cAGAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCAtt > 1:2106347/1‑93 (MQ=255) aGAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTc > 1:2220683/1‑93 (MQ=255) gAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCa > 1:985758/1‑93 (MQ=255) gAAATCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCa > 1:6829209/1‑93 (MQ=255) aaTCATCCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCata < 2:7100625/93‑1 (MQ=255) tcCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAAt > 2:3091010/1‑93 (MQ=255) tcCTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAAt < 1:5280407/93‑1 (MQ=255) ccTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATa > 1:4328329/1‑93 (MQ=255) cTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATac < 2:4614053/93‑1 (MQ=255) cTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATac < 1:3188761/93‑1 (MQ=255) cTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATac < 1:3560383/93‑1 (MQ=255) cTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATac > 1:5095624/1‑93 (MQ=255) cTTAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATac > 1:5815390/1‑93 (MQ=255) tAGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATacac < 1:254628/93‑1 (MQ=255) aGC‑GAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACt < 2:3645271/93‑1 (MQ=255) gC‑GAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACtt < 2:3207748/93‑1 (MQ=255) || GTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGC‑GAAACGTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACTTCA > NC_000913/3944590‑3944764 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |