Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,255,885 (A)8→7 intergenic (‑288/+43) yhaO ← / ← yhaP putative transport system permease protein/putative L‑serine dehydratase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,255,8780A.99.7% 1391.1 / ‑2.8 305intergenic (‑281/+50)yhaO/yhaPputative transport system permease protein/putative L‑serine dehydratase
Reads supporting (aligned to +/- strand):  ref base A (1/0);  new base . (159/145);  total (160/145)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.47e-01

Only 100 of 343 total aligned reads displayed.

ACAATCAAGACTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGTGA  >  NC_000913/3255786‑3255966
                                                                                            |                                                                                        
  aaTCAAGACTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACaaa                                                                                        >  2:4186326/1‑93 (MQ=255)
   aTCAAGACTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACaaaa                                                                                       >  1:4703931/1‑93 (MQ=255)
    tCAAGACTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACaaaaa                                                                                      <  2:5306593/93‑1 (MQ=255)
    tCAAGACTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACaaaaa                                                                                      <  1:2959583/93‑1 (MQ=255)
     cAAGACTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACaaaaaa                                                                                     >  2:2502628/1‑93 (MQ=255)
       aGACTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACaaaaaaag                                                                                   <  2:6013355/93‑2 (MQ=255)
        gACTTTGAAATAACGGCGATAGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACaaaaaaagg                                                                                  <  1:7034849/93‑3 (MQ=255)
         aCTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACaaaaaaaggt                                                                                 >  1:5751701/1‑90 (MQ=255)
          cTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACaaaaaaaggtg                                                                                <  1:4073826/93‑5 (MQ=255)
          cTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACaaaaaaaggtg                                                                                >  2:3463298/1‑89 (MQ=255)
           tttGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAGGTGc                                                                              <  2:2407117/93‑1 (MQ=255)
           tttGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAGGTGc                                                                              <  2:1467934/93‑1 (MQ=255)
           tttGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAAGAGAATATTCATTCTCTATTTGCTGCAGATCACAAAAAAAGGTGc                                                                              >  2:4415123/1‑93 (MQ=255)
            ttGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAGGTGca                                                                             >  1:2414986/1‑93 (MQ=255)
            ttGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAGGTGca                                                                             <  2:4710997/93‑1 (MQ=255)
            ttGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAGGTGca                                                                             <  1:1970475/93‑1 (MQ=255)
              gAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAGGTGcaca                                                                           <  2:3641875/93‑1 (MQ=255)
              gAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAGGTGcaca                                                                           <  1:5014914/93‑1 (MQ=255)
               aaaTAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAGGTGCACAt                                                                          <  2:2978727/93‑1 (MQ=255)
                aagaaCGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAGGTGCACAtt                                                                         <  1:5392693/90‑1 (MQ=255)
                aaTAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAGGTGCACAtt                                                                         <  1:1599018/93‑1 (MQ=255)
                  tAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAGGTGCACATTtg                                                                       >  1:6306982/1‑93 (MQ=255)
                  tAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAGGTGCACATTtg                                                                       <  2:6858805/93‑1 (MQ=255)
                  tAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAGGTGCACATTtg                                                                       <  1:4606635/93‑1 (MQ=255)
                    aCGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAGGTGCACATTtgtg                                                                     <  1:6986332/93‑1 (MQ=255)
                       gagaTGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAGGTGCACATTTGTGCAc                                                                  >  1:7726996/1‑93 (MQ=255)
                        agaTGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAGGTGCACATTTGTGCAcc                                                                 <  2:927947/93‑1 (MQ=255)
                        agaTGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAGGTGCACATTTGTGCAcc                                                                 >  1:3302579/1‑93 (MQ=255)
                         gaTGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAGGTGCACATTTGTGCAccc                                                                >  2:6510854/1‑93 (MQ=255)
                         gaTGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAGGTGCACATTTGTGCAccc                                                                >  2:7228475/1‑93 (MQ=255)
                           tGGATAAGATTTTTCTAATAAATTAATCGCAGGAGAATATTCTTTCTCTATTGGCGGCAGACCACAAAAAAAGGTGCACTTTTGTGCCCCCaa                                                              <  2:5663613/93‑1 (MQ=255)
                           tGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAGGTGCACATTTGTGCACCCaa                                                              >  2:54886/1‑93 (MQ=255)
                             gATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAGGTGCACATTTGTGCACCCAAgg                                                            >  2:1343040/1‑93 (MQ=255)
                               tAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAGGTGCACATTTGTGCACCCAAGGAt                                                          >  1:3376673/1‑93 (MQ=255)
                               tAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAGGTGCACATTTGTGCACCCAAGGAt                                                          <  2:2473503/93‑1 (MQ=255)
                                aaGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAGGTGCACATTTGTGCACCCAAGGATg                                                         >  1:428002/1‑93 (MQ=255)
                                aaGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAGGTGCACATTTGTGCACCCAAGGATg                                                         <  2:7727182/93‑1 (MQ=255)
                                 aGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAGGTGCACATTTGTGCACCCAAGGATGa                                                        >  1:1170697/1‑93 (MQ=255)
                                 aGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAGGTGCACATTTGTGCACCCAAGGATGa                                                        <  1:2795662/93‑1 (MQ=255)
                                   aaTTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAGGTGCACATTTGTGCACCCAAGGATGaaa                                                      >  2:6647514/1‑93 (MQ=255)
                                   aaTTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAGGTGCACATTTGTGCACCCAAGGATGaaa                                                      <  1:3424729/93‑1 (MQ=255)
                                     ttttCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGc                                                    >  1:1790467/1‑93 (MQ=255)
                                      tttCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCt                                                   >  1:6801614/1‑93 (MQ=255)
                                      tttCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCt                                                   >  1:984640/1‑93 (MQ=255)
                                       ttatactaAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTg                                                  <  2:4539018/90‑1 (MQ=255)
                                         ctactaAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACAAAACAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGAc                                                <  2:7041198/93‑1 (MQ=255)
                                          tactaAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACa                                               <  1:4246632/93‑1 (MQ=255)
                                          tactaAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACa                                               <  1:1696040/93‑1 (MQ=255)
                                           actaAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAg                                              <  2:1145052/93‑1 (MQ=255)
                                            ctaAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGc                                             <  1:1381754/93‑1 (MQ=255)
                                                aTTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATg                                         >  2:5207137/1‑93 (MQ=255)
                                                aTTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATg                                         >  1:4474471/1‑93 (MQ=255)
                                                aTTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATg                                         >  1:7328526/1‑93 (MQ=255)
                                                  tAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTc                                       >  2:6379553/1‑93 (MQ=255)
                                                   aaTCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCa                                      <  1:7532401/93‑1 (MQ=255)
                                                     tCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAGGTGCACATTTGTGCACCCAAGGGTGAAAGCTGACAGCAATGTCAGc                                    >  2:4281139/1‑93 (MQ=255)
                                                     tCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGc                                    <  2:416817/93‑1 (MQ=255)
                                                     tCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGc                                    <  1:4827350/93‑1 (MQ=255)
                                                      cGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGcc                                   >  1:6161816/1‑93 (MQ=255)
                                                      cGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGcc                                   >  1:6920089/1‑93 (MQ=255)
                                                        cAGGAGAATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGc                                 >  2:2612118/1‑93 (MQ=255)
                                                         aGGAGAATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCa                                <  2:4594224/93‑1 (MQ=255)
                                                         aGGAGAATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCa                                >  2:3091844/1‑93 (MQ=255)
                                                         aGGAGAATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCa                                <  2:2064240/93‑1 (MQ=255)
                                                          ggAGAATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAg                               >  1:7241733/1‑93 (MQ=255)
                                                          ggAGAATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAg                               >  2:1727128/1‑93 (MQ=255)
                                                           gagaATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGa                              >  2:3544553/1‑93 (MQ=255)
                                                            agaATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGAc                             >  1:7128316/1‑93 (MQ=255)
                                                            agaATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGAc                             >  1:2600975/1‑93 (MQ=255)
                                                               attttcattcTCTATTTGCGGCAGATCACAAAAAAAGGCGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCAc                          >  2:1898920/4‑93 (MQ=255)
                                                               atatTCATTCTCTATTTGCGGCAGATCACAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCAc                          <  2:759135/93‑1 (MQ=255)
                                                                 attcattcTCTATTTGCGGCAGATCACAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACtt                        <  2:379229/93‑1 (MQ=255)
                                                                 attcattcTCTATTTGCGGCAGATCACAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACtt                        >  2:3869159/1‑93 (MQ=255)
                                                                 attcattcTCTATTTGCGGCAGATCACAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACtt                        >  1:3817741/1‑93 (MQ=255)
                                                                 attcattcTCTATTTGCGGCAGATCACAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACtt                        >  2:7396558/1‑93 (MQ=255)
                                                                  ttcattcTCTATTTGCGGCAGATCACAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACttt                       >  1:3998082/1‑93 (MQ=255)
                                                                  ttcattcTCTATTTGCGGCAGATCACAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACttt                       >  1:5248560/1‑93 (MQ=255)
                                                                  ttcattcTCTATTTGCGGCAGATCACAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACttt                       >  1:2198383/1‑93 (MQ=255)
                                                                     attcTCTATTTGCGGCAGATCACAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAAt                    <  2:7475914/93‑1 (MQ=255)
                                                                      ttcTCTATTTGCGGCAGATCACAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATg                   >  1:7876702/1‑93 (MQ=255)
                                                                      ttcTCTATTTGCGGCAGATCACAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATg                   <  1:5543171/93‑1 (MQ=255)
                                                                      ttcTCTATTTGCGGCAGATCACAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATg                   <  1:2733306/93‑1 (MQ=255)
                                                                        ctctATTTGCGGCAGATCACAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGc                 >  2:2718012/1‑93 (MQ=255)
                                                                        ctctATTTGCGGCAGATCACAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGc                 >  1:778052/1‑93 (MQ=255)
                                                                         tctATTTGCGGCAGATCACAAAAAAAGGTGCACATTTGTGCACCCCAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGcc                >  2:4669183/1‑93 (MQ=255)
                                                                         tctATTTGCGGCAGATCACAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGcc                >  2:6906451/1‑93 (MQ=255)
                                                                          ctATTTGCGGCAGATCACAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCa               <  1:6431361/93‑1 (MQ=255)
                                                                            aTTTGCGGCAGATCACAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGt             <  1:5986797/93‑1 (MQ=255)
                                                                              ttGCGGCAGATCACAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGtcc           <  2:800232/93‑1 (MQ=255)
                                                                              ttGCGGCAGATCACAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGtcc           <  2:3989741/93‑1 (MQ=255)
                                                                                gCGGCAGATCACAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGtcctc         >  1:5891077/1‑93 (MQ=255)
                                                                                gCGGCAGATCACAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGtcctc         <  1:5036731/93‑1 (MQ=255)
                                                                                 cGGCAGATCACAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGtcctcc        <  2:1504137/93‑1 (MQ=255)
                                                                                  ggCAGATCACAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCcg       >  1:3001209/1‑93 (MQ=255)
                                                                                     aGATCACAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCcgcgg    >  1:2262538/1‑92 (MQ=255)
                                                                                     aGATCACAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGt    <  1:5126351/93‑1 (MQ=255)
                                                                                      gATCACAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGTg   >  1:7479263/1‑93 (MQ=255)
                                                                                      gATCACAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGTg   >  2:3911850/1‑93 (MQ=255)
                                                                                      gATCACAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGTg   >  2:4852168/1‑93 (MQ=255)
                                                                                       aTCACAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGTGa  <  1:7907494/93‑1 (MQ=255)
                                                                                            |                                                                                        
ACAATCAAGACTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGTGA  >  NC_000913/3255786‑3255966

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: