BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,554,113	Δ1 bp	coding (372/396 nt)	yhgKJ ←	RNA phosphage cyclase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,554,113	0	C	.	99.6%	1120.0 / ‑3.3	252	coding (372/396 nt)	yhgKJ	RNA phosphage cyclase
Reads supporting (aligned to +/- strand): ref base C (0/0); major base . (119/132); minor base A (0/1); total (119/133)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01

Only 100 of 281 total aligned reads displayed.

TGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑G‑AGGCGGCGCCGACGGGTTATCGGTCGCCG‑C‑GCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTCCGGC  >  NC_000913/3554026‑3554199

tGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGt‑gccg‑c                                                                                    <  1:3075529/93‑1 (MQ=255)

tGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGGTATCGGt‑gccg‑c                                                                                    >  2:3652426/1‑93 (MQ=255)

 ggTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGt‑gccg‑cc                                                                                   >  1:5820635/1‑92 (MQ=255)

   tttGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGCAGGGTTATCGGt‑gccg‑ccgc                                                                                 >  1:2192139/1‑90 (MQ=255)

   tttGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGt‑gccg‑ccgc                                                                                 >  1:6415666/1‑90 (MQ=255)

   tttGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGt‑gccg‑ccgc                                                                                 <  1:5705079/93‑4 (MQ=255)

    ttGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGt‑gccg‑ccgct                                                                                >  1:1552409/1‑89 (MQ=255)

    ttGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGt‑gccg‑ccgct                                                                                >  2:6845863/1‑89 (MQ=255)

      gCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCC‑GCTCa                                                                              <  1:3432080/93‑1 (MQ=255)

        tgatgaATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCC‑GCTCACt                                                                            >  2:1355231/1‑93 (MQ=255)

         gatgaATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCC‑GCTCACtt                                                                           >  2:6657810/1‑93 (MQ=255)

         gatgaATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCC‑GCTCACtt                                                                           >  1:6977695/1‑93 (MQ=255)

          atgaATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCC‑GCTCACTTc                                                                          <  2:1098504/93‑1 (MQ=255)

             aaTTCCTATGTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAac                                                                       <  1:1914806/93‑1 (MQ=255)

              aTTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAaca                                                                      <  1:206063/93‑1 (MQ=255)

               ttCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAacac                                                                     >  2:634146/1‑93 (MQ=255)

                tCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAACAcg                                                                    >  1:2789640/1‑93 (MQ=255)

                  cTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAACAcgcg                                                                  >  1:4552477/1‑93 (MQ=255)

                   tATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGa                                                                 >  1:2801326/1‑93 (MQ=255)

                    aTTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCAC‑AGGCGGCGCCGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGaa                                                                <  2:6998001/93‑1 (MQ=255)

                    aTTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGaa                                                                <  2:5045316/93‑1 (MQ=255)

                     ttttCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAg                                                               >  1:2501137/1‑93 (MQ=255)

                     ttttCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAg                                                               <  1:4161315/93‑1 (MQ=255)

                       ttCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGt                                                             <  1:1702058/93‑1 (MQ=255)

                         cGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTcc                                                           <  2:127929/93‑1 (MQ=255)

                         cGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTcc                                                           <  1:2173119/93‑1 (MQ=255)

                         cGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCC‑GCTCACATCAACACGCGAAGGTcc                                                           >  2:2177777/1‑93 (MQ=255)

                          gCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTCCa                                                          <  2:6712922/93‑1 (MQ=255)

                           ccAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTCCAt                                                         <  1:3660486/93‑1 (MQ=255)

                           ccAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTCCAt                                                         <  1:4455036/93‑1 (MQ=255)

                           ccAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTCCAt                                                         >  1:5988828/1‑93 (MQ=255)

                           ccAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTCCAt                                                         <  1:1784586/93‑1 (MQ=255)

                            cagcagCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTCCATc                                                        <  2:2270083/93‑1 (MQ=255)

                            cagcagCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTCCATc                                                        >  2:7620422/1‑93 (MQ=255)

                            cagcagCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTCCATc                                                        >  1:5142002/1‑93 (MQ=255)

                            cagcagCGCCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTCCATc                                                        <  2:3028899/93‑1 (MQ=255)

                             agcagcGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTCCATCg                                                       <  1:4442882/93‑1 (MQ=255)

                              gcagcGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTCCATCgg                                                      <  2:4040150/93‑1 (MQ=255)

                                  cGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTCCATCGGCaaa                                                  <  1:5214176/93‑1 (MQ=255)

                                  cGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTCCATCGGCaaa                                                  >  2:4185207/1‑93 (MQ=255)

                                  cGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTCCATCGGCaaa                                                  >  1:7930754/1‑93 (MQ=255)

                                    gCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTCCATCGGCAAAcc                                                <  2:522844/93‑1 (MQ=255)

                                     cTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTCCATCGGCAAACca                                               <  2:392357/93‑1 (MQ=255)

                                      tCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTCCATCGGCAAACcac                                              >  2:1642190/1‑93 (MQ=255)

                                      tCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTCCATCGGCAAACcac                                              <  2:7495904/93‑1 (MQ=255)

                                      tCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTCCATCGGCAAACcac                                              >  1:1095504/1‑93 (MQ=255)

                                      tCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCG‑CAGCTCACTTCAACACACGAAGGTCCATCGGCAcaccac                                              >  2:2227861/1‑93 (MQ=255)

                                        cAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAg                                            >  2:3760894/1‑93 (MQ=255)

                                        cAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAg                                            <  2:4246956/93‑1 (MQ=255)

                                        cAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAg                                            <  2:778142/93‑1 (MQ=255)

                                        cAGCACCCGGCGGATAAAACCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTCCATCGGCAAACAACAg                                            >  1:2537186/1‑93 (MQ=255)

                                         aGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAgc                                           <  1:679531/93‑1 (MQ=255)

                                          gCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAgcg                                          >  2:3347426/1‑93 (MQ=255)

                                           cACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAgcgc                                         <  2:5519168/93‑1 (MQ=255)

                                            aCCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGcgcg                                        >  1:6159226/1‑93 (MQ=255)

                                            aCCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGcgcg                                        <  2:3476468/93‑1 (MQ=255)

                                            aCCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGcgcg                                        >  2:3269450/1‑93 (MQ=255)

                                             cccGGCGGATAAAATCC‑GCGGGCGGCGCCGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCgg                                       <  1:7498065/93‑1 (MQ=255)

                                               cggcggATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGgc                                     >  1:7330571/1‑93 (MQ=255)

                                               cggcggATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGgc                                     <  2:4483008/93‑1 (MQ=255)

                                                ggcggATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGgca                                    >  1:894754/1‑93 (MQ=255)

                                                ggcggATAAAATCC‑GCAGGCGGCGCCGACGGGGTATCGG‑AGCCGCC‑GCTCACTTCAACACGCGAAGCTCCATCGGCAAACCACAGCGCGAgca                                    >  2:1985500/1‑93 (MQ=255)

                                                   ggATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGgcagcc                                 >  2:5935142/1‑92 (MQ=255)

                                                   caacaaaaTCC‑GCAGGCGGCGCAGTCGCGTTACCGGT‑GCCGCC‑TCTCACTTAAACACGCGAGGGTCCATCGGCAATCCACAGCGCGGgcagca                                 <  2:4913526/89‑1 (MQ=255)

                                                    gATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCAc                                >  1:7816421/1‑93 (MQ=255)

                                                    gATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCAc                                >  2:6155472/1‑93 (MQ=255)

                                                        aaaTCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGtt                            <  2:5780946/93‑1 (MQ=255)

                                                        aaaTCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTCCATAGGCAGACCACAGCGCGGGCAGCACCGtt                            >  2:6913949/1‑93 (MQ=255)

                                                        aaaTCC‑GCAGGCGGCGCCGACGGGTTAACGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGtt                            <  2:4395044/93‑1 (MQ=255)

                                                             ccgcaGGCGGCGCCGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTgca                        <  2:1251205/89‑1 (MQ=255)

                                                             ccgcaGGCGGCGCCGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTgca                        <  2:274503/89‑1 (MQ=255)

                                                             ccgcaGGCGGCGCCGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTgca                        <  2:2867518/89‑1 (MQ=255)

                                                              cgcaGGCGGCGCCGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTgcag                       >  2:816429/4‑93 (MQ=255)

                                                                  ggcggcGCCGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCAcc                   >  1:3954473/1‑93 (MQ=255)

                                                                  ggcggcGCCGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGACCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCAcc                   >  2:2345278/1‑93 (MQ=255)

                                                                  gcccgcgcCGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCAcc                   <  1:3214744/89‑1 (MQ=255)

                                                                   gcggcgCCGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCa                  <  1:4902714/93‑1 (MQ=255)

                                                                   gcggcgCCGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCa                  <  1:5572046/93‑1 (MQ=255)

                                                                   gcggcgCCGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCa                  <  2:1856904/93‑1 (MQ=255)

                                                                    gggcgCGGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTCCATCGGCAACCCACAGCGCGGGCAGCACCGTTTGCAGCACCAg                 <  2:4768354/92‑1 (MQ=255)

                                                                    cggcgCCGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAg                 <  1:7239525/93‑1 (MQ=255)

                                                                    cggcgCCGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAg                 <  1:2340973/93‑1 (MQ=255)

                                                                    cggcgCCGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAg                 >  2:6216293/1‑93 (MQ=255)

                                                                      gcgcCGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCg               >  2:3153078/1‑93 (MQ=255)

                                                                      gcgcCGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCg               <  2:5650285/93‑1 (MQ=255)

                                                                        gcCGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTa             <  2:5373216/93‑1 (MQ=255)

                                                                         ccGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTAc            >  1:1012390/1‑93 (MQ=255)

                                                                          cGACGGGTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACa           >  2:6732934/1‑93 (MQ=255)

                                                                            aCGGGTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAAc         >  1:3844993/1‑93 (MQ=255)

                                                                             cGGGTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACt        <  1:2631619/93‑1 (MQ=255)

                                                                               ggTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTc      <  1:181294/93‑1 (MQ=255)

                                                                                gTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTcc     <  2:7257889/93‑1 (MQ=255)

                                                                                gTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTcc     <  1:1304569/93‑1 (MQ=255)

                                                                                gTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTcc     <  1:4276555/93‑1 (MQ=255)

                                                                                gTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTcc     <  2:629414/93‑1 (MQ=255)

                                                                                gTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTcc     >  2:516989/1‑93 (MQ=255)

                                                                                gTTATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGAACCGTTTGCAGCACCAGCGCACAACTTcc     >  1:6378674/1‑93 (MQ=255)

                                                                                  tATCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTCCgg   >  1:6952354/1‑93 (MQ=255)

                                                                                   aTCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTCCGgc  <  2:2713971/93‑1 (MQ=255)

                                                                                   aTCGGT‑GCCGCC‑GCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTCCGgc  >  1:7847066/1‑93 (MQ=255)

TGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑G‑AGGCGGCGCCGACGGGTTATCGGTCGCCG‑C‑GCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTCCGGC  >  NC_000913/3554026‑3554199

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`