| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,778,658 | (C)5→4 | intergenic (+14/‑184) | lldD → / → yibK | L‑lactate dehydrogenase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,778,654 | 0 | C | . | 93.2% | 744.9 / 38.6 | 192 | intergenic (+10/‑188) | lldD/yibK | L‑lactate dehydrogenase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (13/0); new base . (6/173); total (19/173) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.31e-16 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
Only 100 of 237 total aligned reads displayed.
TTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑CCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTT > NC_000913/3778562‑3778742 | ttACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTgcg‑c > 2:7215857/1‑93 (MQ=255) cGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑cccc < 2:672783/93‑1 (MQ=255) gCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑cccct < 2:1842817/93‑2 (MQ=255) gCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑ccccc > 1:730010/1‑93 (MQ=255) aaGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑gcccccc > 1:1818699/1‑91 (MQ=255) aaGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑ccccccc > 1:4958000/1‑91 (MQ=255) aaGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑ccccccc > 1:4112927/1‑91 (MQ=255) aGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑cccctcac < 1:7486047/93‑5 (MQ=255) ttCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑Ccccccccccc > 2:4498120/1‑93 (MQ=255) tCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑Cccccccccccc > 2:3433317/1‑92 (MQ=255) tCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑Ccccccccccca > 1:5562870/1‑92 (MQ=255) cGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑CCCCTCACCCTaa < 1:2137189/93‑1 (MQ=255) cGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑CCCCTCACCCTaa < 1:979956/93‑1 (MQ=255) gCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑Cccccccccccccc > 1:5176114/1‑90 (MQ=255) gCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑CCCCTCACCCTAAc < 1:4832531/93‑1 (MQ=255) tGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑CCCCTCACCCTAAccc < 2:7098282/93‑1 (MQ=255) tGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑CCCCTCACCCTAAccc < 1:5504890/93‑1 (MQ=255) gTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑CCCCTCACCCTAACCctc < 2:1422490/93‑1 (MQ=255) gTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑CCCCTCACCCTAACCctc < 2:883921/93‑1 (MQ=255) gTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑CCCCTCACCCTAACCctc < 1:1223587/93‑1 (MQ=255) cAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑CCCCTCACCCTAACCCTCTcc < 2:6287265/93‑1 (MQ=255) aGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑CCCCTCACCCTAACCCTCTccc < 1:158088/93‑1 (MQ=255) aGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑CCCCTCACCCTAACCCTCTccc < 2:7858902/93‑1 (MQ=255) ggggCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑CCCCCCCCCCCCAcccccccccc > 2:4103953/1‑93 (MQ=255) ggggCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑CCCCC‑CCCCCCACCCCCCTcccc > 2:6609301/1‑92 (MQ=255) ggggCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑CCCCTCCCCCCCACCCTCccccc > 2:7793041/1‑92 (MQ=255) ggCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑CCCCC‑CCCCCCAACCCCCTcccccc > 1:2749989/1‑90 (MQ=255) ggCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑CCCCTCACCCTAACCCTCTCCCTCa < 1:4522170/93‑1 (MQ=255) gCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑CCCCTCACCCTAACCCTCTCCCTCAg < 1:80849/93‑1 (MQ=255) gggTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑CCCCTCTCCCTAACCCTCTCCCTCAGGga < 2:2888718/93‑1 (MQ=255) gggTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑CCCCTCACCCTAACCCTCTCCCTCAGGga < 1:3211999/93‑1 (MQ=255) gggTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑CCCCTCACCCTAACCCTCTCCCTCAGGga < 1:2232761/93‑1 (MQ=255) ggTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCCACCCCCCAcccctccccctcggtg > 1:6615854/1‑89 (MQ=255) ggTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑CCCCTCACCCTAACCCTCTCCCTCAGGgag < 1:5704804/93‑1 (MQ=255) gTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑CCCCTCACCCTAACCCTCTCCCTCAGGgaga < 2:3202000/93‑1 (MQ=255) gTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑CCCCTCACCCTAACCCTCTCCCTCAGGgaga < 1:705069/93‑1 (MQ=255) tAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGagag < 1:5249793/93‑1 (MQ=255) tAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGagag < 2:5578831/93‑1 (MQ=255) aaaGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAgg < 1:6886602/93‑1 (MQ=255) aaaGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAgg < 2:2577869/93‑1 (MQ=255) aaGAGTTGCCTGCGGCACTGGCTCCCATGGCGAATGGCAATGCGGCATAGTCGTTTGCG‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAggg < 2:5062133/93‑1 (MQ=38) aaGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑CCCCC‑CACCCCAAACCCCCCCCTCAGGGAGAggg > 2:2714199/1‑93 (MQ=255) aaGAGTTGCCTGCGGCACGGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAggg < 2:5672124/93‑1 (MQ=255) agagTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑CCCCCCCCCCCCAACCCCCCCCCCCCGgggggggg > 1:5385074/1‑93 (MQ=255) gagTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGa < 1:5197335/93‑1 (MQ=255) gagTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGa < 1:4222800/93‑1 (MQ=255) agTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGAc < 1:7226569/93‑1 (MQ=255) agTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGAc < 2:4330617/93‑1 (MQ=255) agTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGAc < 2:7635461/93‑1 (MQ=255) agTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGAc < 2:6401534/93‑1 (MQ=255) agTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGAc < 1:2907342/93‑1 (MQ=255) agTTGCCTGCGGCACTGGCGCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGAc < 2:6769460/93‑1 (MQ=255) agTTGCCTGCGCCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑CCCCTCACCCTAACCTTCTCCCTCAGGGAGAGGGGAc < 1:3834477/93‑1 (MQ=255) gTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGAcc < 2:2191366/93‑1 (MQ=255) ccTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTc < 1:916603/93‑1 (MQ=255) cTGCGGCACTTGCTCCCATGGCTAAAGGCAATGCGGCATAGTCGTTTGCG‑‑CCCCTCCCCCTATCCCTCTCCCTCAGGGAGAGGGGACCGTTCg < 2:798483/93‑1 (MQ=255) cTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCg < 2:4556363/93‑1 (MQ=255) ggCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGgcgc < 2:371096/93‑1 (MQ=255) gCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCt < 1:3057601/93‑1 (MQ=255) cTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCtgta < 2:1548964/93‑1 (MQ=255) cTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCtgta < 1:2950661/93‑1 (MQ=255) tGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑CCCCTCCCCCTACCCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCtgtat < 2:366775/93‑1 (MQ=255) tGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCtgtat < 1:2537767/93‑1 (MQ=255) ggCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCtgtatg < 2:6783146/93‑1 (MQ=255) gCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCtgtatgt < 1:6584165/93‑1 (MQ=255) cTCCCAT‑GCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTAc < 1:5052725/93‑1 (MQ=38) tCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTAc < 1:7868884/93‑1 (MQ=255) cccATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑CCCCC‑CCCCCCCACCCACTCCCTCACGGGGAGGGGGGCGGTCGGCGCCGTATGTACt > 1:954909/1‑93 (MQ=255) ccATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTc < 1:1716052/93‑1 (MQ=255) aTGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTccc < 2:2613/93‑1 (MQ=255) ggCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTc < 1:2943293/93‑1 (MQ=255) ggCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTc < 1:261911/93‑1 (MQ=255) gCGAAAGGGAATGCGGCATAGTCGTTTGCG‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCa < 1:7599622/93‑1 (MQ=255) gAAAGGGAATGCGGCATAGTCGTTTGCG‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCAct < 2:1292199/93‑1 (MQ=255) gAAAGGGAATGCGGCATAGTCGTTTGCG‑‑CCCCTCACCCCAACCCTCTCCCTCCGGGGGAGGGGGGCGTTCCGCGCTGTATGTTCTCCCTCAct > 2:3964834/1‑93 (MQ=255) aaaGGGAATGCGGCATAGTCGTTTGCG‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCActc < 1:1529257/93‑1 (MQ=255) aaGGGAATGCGGCATAGTCGTTTGCG‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCActct < 1:2758951/93‑1 (MQ=255) ggAATGCGGCATAGTCGTTTGCG‑CCCCC‑CCCCCCCACCCCCTCCCTCCCGGGGGGGGGGCCGCTCGGCGCCGTTTGTACTTCCTCCctctcta > 2:5509502/1‑90 (MQ=255) gAATGCGGCATAGTCGTTTGCG‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGaaa < 2:4148719/93‑1 (MQ=255) gAATGCGGCATAGTCGTTTGCG‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGaaa < 2:580957/93‑1 (MQ=255) gAATGCGGCATAGTCGTTTGCG‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGaaa < 1:1956330/93‑1 (MQ=255) gAATGCGGCATAGTCGTTTGCG‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGaaa < 2:3693474/93‑1 (MQ=255) aaTGCGGCATAGTCGTTTGCG‑CCCCC‑CACCCCAACCCTCTCCCCCCGGGGGAGGGGGACGGTCGGCGCTGTATGTACTCCCTCACTCTGAAAc > 1:1409953/1‑93 (MQ=255) aaTGCGGCATAGTCGTTTGCG‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAAc < 1:7383187/93‑1 (MQ=255) aaTGCGGCATAGTCGTTTGCG‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAAc < 2:1525454/93‑1 (MQ=255) aTGCGGCATAGTCGTTTGCG‑‑CCCCTCCCCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACg < 2:3264644/93‑1 (MQ=255) aTGCGGCATAGTCGTTTGCG‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACg < 1:2723081/93‑1 (MQ=255) gCGGCATAGTCGTTTGCG‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGac < 1:3932768/93‑1 (MQ=255) gCATAGTCGTTTGCG‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACAcc < 2:317598/93‑1 (MQ=255) aTAGTCGTTTGCG‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGc < 2:5242291/93‑1 (MQ=255) tAGTCGTTTGCG‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAAACACACCGcc > 1:6800830/1‑92 (MQ=37) aGTCGTTTGCG‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCAc < 1:3542544/93‑1 (MQ=255) gTCGTTTGCG‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCAct < 2:5975516/93‑1 (MQ=255) tCGTTTGCG‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCActc < 2:6976686/93‑1 (MQ=255) cGTTTGCG‑‑CTCCGCTCCCTAACCCTCTCCCTCGGGGAGTGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCAGAAACGACACCGCActct < 2:3673021/93‑1 (MQ=255) cGTTTGCG‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCActct < 1:5762975/93‑1 (MQ=255) gTTTGCG‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCtt < 2:3794681/93‑1 (MQ=255) gTTTGCG‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCtt < 2:4706151/93‑1 (MQ=255) tttGCG‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCttt < 2:5006821/93‑1 (MQ=255) ttGCG‑‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCtttt < 2:5340220/93‑1 (MQ=255) | TTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑CCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTT > NC_000913/3778562‑3778742 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |