Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,477,041 Δ1 bp intergenic (‑151/‑269) b4256 ← / → yjgN hypothetical protein/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,477,0410G.99.6% 1082.2 / ‑3.7 238intergenic (‑151/‑269)b4256/yjgNhypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base G (1/0);  new base . (71/166);  total (72/166)
Fisher's exact test for biased strand distribution p-value = 3.03e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 241 total aligned reads displayed.

CGTCAAGATTCGGATCGGCGACGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCGAGGATTATCCTGCAGCGTCAGGCGACGATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAAT  >  NC_000913/4476953‑4477127
                                                                                        |                                                                                       
 gTCAAGATTCGGATCGGCGACGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGAtt                                                                                   >  2:4677771/1‑93 (MQ=255)
  tCAAGATTCGGATCGGCGACGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTa                                                                                  <  2:574828/93‑1 (MQ=255)
  tCAAGATTCGGATCGGCGACGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTa                                                                                  >  1:3102205/1‑93 (MQ=255)
   cAAGATTCGGATCGGCGACGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTAt                                                                                 <  1:976822/93‑1 (MQ=255)
     aGATTCGGATCGGCGACGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATcc                                                                               >  2:4350899/1‑93 (MQ=255)
     aGATTCGGATCGGCGACGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATcc                                                                               <  1:1830481/93‑1 (MQ=255)
     aGATTCGGATCGGCGACGGTGTAGCCCTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATcc                                                                               <  1:4500097/93‑1 (MQ=255)
      gATTCGGATCGGCGACGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCt                                                                              >  1:5902035/1‑93 (MQ=255)
      gATTCGGATCGGCGACGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCt                                                                              <  2:7484314/93‑1 (MQ=255)
      gATTCGGATCGGCGACGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCt                                                                              >  1:3972574/1‑93 (MQ=255)
           ggATCGGCGACGGTGTAGCCTTTATCAGCGGTACGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGc                                                                         <  1:7045006/93‑1 (MQ=255)
            gATCGGCGACGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCg                                                                        >  2:5866899/1‑93 (MQ=255)
             aTCGGCGACGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGt                                                                       >  1:3437516/1‑93 (MQ=255)
             aTCGGCGACGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGt                                                                       <  1:2621581/93‑1 (MQ=255)
              tCGGCGACGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTc                                                                      <  2:3152339/93‑1 (MQ=255)
               cgtcGACGGTGTAGCTTTTTTCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCa                                                                     <  1:6657038/90‑1 (MQ=255)
               cGGCGACGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCa                                                                     <  2:7404822/93‑1 (MQ=255)
                 gCGACGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTGTCCTGCAGCGTCAgg                                                                   <  1:1594353/93‑1 (MQ=255)
                  cGACGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGc                                                                  >  2:7158990/1‑93 (MQ=255)
                  cGACGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGc                                                                  <  1:1527823/93‑1 (MQ=255)
                  cGACGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGc                                                                  <  1:6492418/93‑1 (MQ=255)
                   gACGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGcg                                                                 >  1:5689932/1‑93 (MQ=255)
                   gACGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGcg                                                                 >  1:7397728/1‑93 (MQ=255)
                    gcGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGAAGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGcga                                                                <  2:6398602/92‑1 (MQ=255)
                    aCGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGcga                                                                <  2:35157/93‑1 (MQ=255)
                    aCGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGcga                                                                <  1:3009394/93‑1 (MQ=255)
                    aCGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGcga                                                                <  2:6332023/93‑1 (MQ=255)
                     cGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGcgac                                                               <  1:7908304/93‑1 (MQ=255)
                      ggTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGcgacg                                                              <  2:5214354/93‑1 (MQ=255)
                       gtgtAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGcgacgc                                                             >  1:616282/1‑92 (MQ=255)
                         gtAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGcgacgcat                                                           >  1:6772596/1‑90 (MQ=255)
                         gtAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGcgacgcat                                                           <  2:1349133/93‑4 (MQ=255)
                          tAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGcgacgcatt                                                          >  1:4619124/1‑89 (MQ=255)
                          tAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGcgacgcatt                                                          <  1:7258806/93‑5 (MQ=255)
                            gCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTAc                                                        <  1:4270534/93‑1 (MQ=255)
                             ccTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACa                                                       <  2:7725589/93‑1 (MQ=255)
                             ccTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACa                                                       <  2:927268/93‑1 (MQ=255)
                             ccTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACa                                                       <  1:5718136/93‑1 (MQ=255)
                              ccttATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAg                                                      <  1:2155507/91‑1 (MQ=255)
                              cTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAg                                                      <  2:7320024/93‑1 (MQ=255)
                               tttATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAgg                                                     <  1:5068548/93‑1 (MQ=255)
                               tttATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAgg                                                     >  1:601428/1‑93 (MQ=255)
                                ttATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGt                                                    <  1:4411724/93‑1 (MQ=255)
                                 tATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTg                                                   <  2:7795473/93‑1 (MQ=255)
                                 tATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTg                                                   >  2:7126274/1‑93 (MQ=255)
                                  aTCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGa                                                  <  2:2848352/93‑1 (MQ=255)
                                   tCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGAt                                                 >  2:5984694/1‑93 (MQ=255)
                                    cAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGAtt                                                >  1:7120537/1‑93 (MQ=255)
                                      gCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTgc                                              <  1:1648125/93‑1 (MQ=255)
                                       cGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTgcg                                             <  1:2529528/93‑1 (MQ=255)
                                          tAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTgcggcg                                          >  1:1012734/1‑93 (MQ=255)
                                           aaGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGgcgc                                         >  2:4368118/1‑93 (MQ=255)
                                             gACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCaa                                       <  2:2571182/93‑1 (MQ=255)
                                               ccGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATg                                     >  1:7383801/1‑93 (MQ=255)
                                               ccGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATg                                     >  2:2693145/1‑93 (MQ=255)
                                               ccGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATg                                     <  1:2381841/93‑1 (MQ=255)
                                                cGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGt                                    >  2:5482923/1‑93 (MQ=255)
                                                  tATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTa                                  <  2:3317639/93‑1 (MQ=255)
                                                  tATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTa                                  >  2:7868620/1‑93 (MQ=255)
                                                   aTTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTAt                                 <  1:1096036/93‑1 (MQ=255)
                                                   aTTCGGCGGATACCTGACGAATGACGCGGGCGATAGGAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCACTGttct                                 >  1:4873429/1‑91 (MQ=255)
                                                    ttCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTAtt                                >  2:5972140/1‑93 (MQ=255)
                                                    ttCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTAtt                                <  2:5359063/93‑1 (MQ=255)
                                                       ggcggATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCAt                             >  2:6961092/1‑93 (MQ=255)
                                                       ggcggATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCAt                             <  1:1173465/93‑1 (MQ=255)
                                                       ggcggATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCAt                             <  2:610186/93‑1 (MQ=255)
                                                       ggcggATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCAt                             <  2:4853627/93‑1 (MQ=255)
                                                        gcggATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATa                            <  2:5320833/93‑1 (MQ=255)
                                                        gcggATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATa                            <  2:2364603/93‑1 (MQ=255)
                                                        gcggATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATa                            <  2:7551164/93‑1 (MQ=255)
                                                         cggATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAg                           <  2:2091887/93‑1 (MQ=255)
                                                          ggATACCTGACGAATGACGCGGGCGATAGCAGTATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGt                          <  2:384635/93‑1 (MQ=255)
                                                             tACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTa                       >  2:3963158/1‑93 (MQ=255)
                                                             tACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTa                       <  2:887616/93‑1 (MQ=255)
                                                              aCCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTaa                      <  1:3815448/93‑1 (MQ=255)
                                                               ccTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAAc                     <  1:4237150/93‑1 (MQ=255)
                                                               ccTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAAc                     >  1:2305378/1‑93 (MQ=255)
                                                                 tGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAAccc                   >  2:5577889/1‑93 (MQ=255)
                                                                 tGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAAccc                   <  1:2192722/93‑1 (MQ=255)
                                                                  gACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCa                  <  1:7561007/93‑1 (MQ=255)
                                                                    cGAATGACGCGGGTGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCaat                <  2:2471786/93‑1 (MQ=255)
                                                                    cGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCaat                <  2:3428756/93‑1 (MQ=255)
                                                                    cGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCaat                <  1:3031262/93‑1 (MQ=255)
                                                                      aaTGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCaataa              <  2:1437231/93‑1 (MQ=255)
                                                                      aaTGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCaataa              >  2:4570652/1‑93 (MQ=255)
                                                                       aTGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCaataaa             <  2:1820930/93‑1 (MQ=255)
                                                                        tGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCaataaaa            <  1:800690/93‑1 (MQ=255)
                                                                         gACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATTTTATTCATAGTTTAACCCaataaaaa           <  1:7216643/93‑1 (MQ=255)
                                                                             cgcgCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCaataaaaataaa       <  2:501007/90‑1 (MQ=255)
                                                                             cgGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCcataaaaataaa       <  1:7784568/93‑1 (MQ=255)
                                                                              gggCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAg      <  2:4919167/93‑1 (MQ=255)
                                                                               ggCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAga     >  1:5334190/1‑92 (MQ=255)
                                                                               ggCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGt     <  2:5891430/93‑1 (MQ=255)
                                                                               ggCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGt     <  1:2774847/93‑1 (MQ=255)
                                                                                gCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTa    <  2:5705402/93‑1 (MQ=255)
                                                                                gCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTa    <  2:2576695/93‑1 (MQ=255)
                                                                                gCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCCGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTa    <  2:4514498/93‑1 (MQ=255)
                                                                                 cGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTaa   <  2:4247072/93‑1 (MQ=255)
                                                                                 cGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTaa   >  1:286007/1‑93 (MQ=255)
                                                                                  gATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAAt  <  1:1050761/93‑1 (MQ=255)
                                                                                        |                                                                                       
CGTCAAGATTCGGATCGGCGACGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCGAGGATTATCCTGCAGCGTCAGGCGACGATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAAT  >  NC_000913/4476953‑4477127

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: