BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,605,286	(A)_6→5	coding (264/291 nt)	b1518 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,605,281	0	A	.	100.0%	692.4 / NA	152	coding (259/291 nt)	b1518	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base . (66/86); total (66/86)

Only 100 of 165 total aligned reads displayed.

ATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACGCCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGAATTTATCAATTTTATCTACAATTGGGGTAACGCGCTGACGGGAGTAAAAAA  >  NC_000913/1605189‑1605369

    aGATGAAGACGCAGTGGCGTTCCATAAAACCACGCCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTaaaaa                                                                                      <  1:3117837/93‑1 (MQ=255)

    aGATGAAGACGCAGTGGCGCTCCATAAAACCACGCCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTaaaaa                                                                                      >  2:241555/1‑93 (MQ=255)

    aGATGAAGACGCAGTGGCGCTCCATAAAACCACGCCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTaaaaa                                                                                      <  1:2309614/93‑1 (MQ=255)

      aTGAAGACGCAGTGGCGCTCCATAAAACCACGCCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTaaaaacg                                                                                    >  1:1100650/1‑91 (MQ=255)

       tGAAGACGCAGTGGCGCTCCATAAAACCACGCCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTaaaaacgt                                                                                   >  2:3770438/1‑90 (MQ=255)

        gAAGACGCAGTGGCGTTCCATAAAACCACGCCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTaaaaacgtc                                                                                  <  1:4339526/93‑5 (MQ=255)

         aaGACGCAGTGGCGCTCCATAAAACCACGCCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCt                                                                                <  1:262206/93‑1 (MQ=255)

          aGACGCAGTGGCGCTCCATAAAACCACGCCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTg                                                                               <  2:7206125/93‑1 (MQ=255)

           gACGCAGTGGCGTTCCATAAAACCACGCCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGt                                                                              >  2:5984220/1‑93 (MQ=255)

           gACGCAGTGGCGTTCCATAAAACCACGCCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGt                                                                              >  2:2145127/1‑93 (MQ=255)

           gACGCAGTGGCGTTCCATAAAACCACGCCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGt                                                                              >  2:2321534/1‑93 (MQ=255)

            aCGCAGTGGCGTTCCATAAAACCACGCCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGtt                                                                             >  1:7104857/1‑93 (MQ=255)

              gCAGTGGCGTTCCATAAAACCACGCCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGTTCa                                                                           >  2:3988125/1‑93 (MQ=255)

               cAGTGGCGTTCCATAAAACCACGCCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGTTCaa                                                                          <  2:4115652/93‑1 (MQ=255)

               cAGTGGCGCTCCATAAAACCACGCCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGTTCaa                                                                          <  2:5743180/93‑1 (MQ=255)

                aGTGGCGTTCCATAAAACCACGCCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGTTCAAt                                                                         <  1:4235656/93‑1 (MQ=255)

                  tGGCGTTCCATAAAACCACGCCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGTTCAATgg                                                                       <  2:2907472/93‑1 (MQ=255)

                    gCGTTCCATAAAACCACGCCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGTTCAATGGtt                                                                     >  2:2086785/1‑93 (MQ=255)

                    gCGTTCCATAAAACCACGCCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGTTCAATGGtt                                                                     >  2:7869384/1‑93 (MQ=255)

                    gCGTTCCATAAAACCACGCCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGTTCAATGGtt                                                                     >  2:7869385/1‑93 (MQ=255)

                      gTTCCATAAAACCACGCCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTg                                                                   <  1:1649343/93‑1 (MQ=255)

                       ttCCATAAAACCACGCCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGa                                                                  <  1:961590/93‑1 (MQ=255)

                       ttCCATAAAACCACGCCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGa                                                                  >  1:6129029/1‑93 (MQ=255)

                        tCCATAAAACCACGCCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGAt                                                                 <  2:5333716/93‑1 (MQ=255)

                        tCCATAAAACCACGCCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGAt                                                                 <  2:2879186/93‑1 (MQ=255)

                        tCCATAAAACCACGCCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGAt                                                                 >  1:1822330/1‑93 (MQ=255)

                         ccATAAAACCACGCCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGATg                                                                >  2:1314893/1‑93 (MQ=255)

                          cATAAAACCACGCCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGATGc                                                               >  1:4175453/1‑93 (MQ=255)

                          cATAAAACCACGCCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGATGc                                                               >  1:2412626/1‑93 (MQ=255)

                               aaCCACGCCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGATGCCGTGa                                                          <  2:5317814/93‑1 (MQ=255)

                                aCCACGCCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGATGCCGTGAg                                                         <  2:4483065/93‑1 (MQ=255)

                                 ccACGCCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGATGCCGTGAgg                                                        <  2:5366991/93‑1 (MQ=255)

                                     gCCTCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGaa                                                    <  2:119629/93‑1 (MQ=255)

                                     gCCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGaa                                                    >  1:5880702/1‑93 (MQ=255)

                                     gCCCAACTACAAAACCTGTGTCGCGAATCTGGAATCTTTAATGACCGGACCGCGT‑AAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGaa                                                    <  2:7245485/93‑1 (MQ=255)

                                     gCCCAACTACAAAACCTGTATCGCGAAACTGGAATCTTTAATGACCGGACCGCGT‑AAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGaa                                                    <  2:7245484/93‑1 (MQ=255)

                                       cccACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGAAtt                                                  >  2:5519785/1‑93 (MQ=255)

                                         cACTACAAAACCTGTGTCGCGAAACTGGAATCTTGAATGACCGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGAATTTa                                                <  2:1022219/93‑1 (MQ=255)

                                           cTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGAATTTATc                                              <  2:4228408/93‑1 (MQ=255)

                                            tACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGAATTTATCa                                             >  2:1790121/1‑93 (MQ=255)

                                            tACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGAATTTATCa                                             >  2:4553569/1‑93 (MQ=255)

                                             aCAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGAATTTATCaa                                            <  2:6818815/93‑1 (MQ=255)

                                             aCAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGAATTTATCaa                                            <  1:7286714/93‑1 (MQ=255)

                                             aCAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGAATTTATCaa                                            <  2:5773616/93‑1 (MQ=255)

                                              cAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGAATTTATCAAt                                           >  1:2449474/1‑93 (MQ=255)

                                               aaaaCCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGAAGCCGTGAGGCGAATTTATCAAtt                                          >  2:4301778/1‑93 (MQ=255)

                                                aaaCCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGAATTTATCAAttt                                         >  1:4648693/1‑93 (MQ=255)

                                                aaaCCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGAATTTATCAAttt                                         <  1:4150907/93‑1 (MQ=255)

                                                aaaCCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGAATTTATCAAttt                                         <  1:5996993/93‑1 (MQ=255)

                                                 aaCCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGAATTTATCAAtttt                                        >  2:1668971/1‑93 (MQ=255)

                                                  aCCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGAATTTATCAATTTTa                                       <  1:7815168/93‑1 (MQ=255)

                                                    cTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGAATTTATCAATTTTATc                                     >  1:7267687/1‑93 (MQ=255)

                                                     tgtgTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGAATTTATCAATTTTATCt                                    >  1:1616192/1‑93 (MQ=255)

                                                     tgtgTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGAATTTATCAATTTTATCt                                    >  2:6424995/1‑93 (MQ=255)

                                                     tgtgTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGAATTTATCAATTTTATCt                                    >  2:3371879/1‑93 (MQ=255)

                                                      gtgtCGCGAAACTGGAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGAATTTATCAATTTTATCTa                                   <  2:5026113/93‑1 (MQ=255)

                                                      gtgtCGCGAAACTGGAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGAATTTATCAATTTTATCTa                                   <  2:3451446/93‑1 (MQ=255)

                                                      gtgtCGCGAAACTGGAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGAATTTATCAATTTTATCTa                                   <  2:3253627/93‑1 (MQ=255)

                                                      gtgtCGCGAAACTGGAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGAATTTATCAATTTTATCTa                                   >  2:2818961/1‑93 (MQ=255)

                                                      gtgtCGCGAAACTGGAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGAATTTATCAATTTTATCTa                                   >  2:6980170/1‑93 (MQ=255)

                                                       tgtCGCGAAACTGGAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGAATTTATCAATTTTATCTAc                                  <  1:5500637/93‑1 (MQ=255)

                                                        gtCGCGAAACTGGAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGAATTTATCAATTTTATCTACa                                 <  1:5818656/93‑1 (MQ=255)

                                                         tCGCGAAACTGGAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGAATTTATCAATTTTATCTACaa                                <  1:5636309/93‑1 (MQ=255)

                                                          cgcgAAACTGGAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGAATTTATCAATTTTATCTACAAt                               <  2:600440/93‑1 (MQ=255)

                                                           gcgAAACTGGAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGAATTTATCAATTTTATCTACAAtt                              <  1:443302/93‑1 (MQ=255)

                                                           gcgAAACTGGAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGAATTTATCAATTTTATCTACAAtt                              <  2:5873776/93‑1 (MQ=255)

                                                           gcgAAACTGGAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGAATTTATCAATTTTATCTACAAtt                              >  2:4396400/1‑93 (MQ=255)

                                                             gAAACTGGAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGAATTTATCAATTTTATCTACAATTgg                            <  1:4513110/93‑1 (MQ=255)

                                                             gAAACTGGAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGAATTTATCAATTTTATCTACAATTgg                            <  1:754648/93‑1 (MQ=255)

                                                              aaaCTGGAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGAATTTATCAATTTTATCTACAATTggg                           >  1:1482802/1‑93 (MQ=255)

                                                              aaaCTGGAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGAATTTATCAATTTTATCTACAATTggg                           <  2:2815091/93‑1 (MQ=255)

                                                               aaCTGGAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGAATTTATCAATTTTATCTACAATTgggg                          <  2:3390293/93‑1 (MQ=255)

                                                                aCTGGAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGAATTTATCAATTTTATCTACAATTGGGGt                         <  1:1321560/93‑1 (MQ=255)

                                                                aCTGGAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGAATTTATCAATTTTATCTACAATTGGGGt                         <  1:5077901/93‑1 (MQ=255)

                                                                aCTGGAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGAATTTATCAATTTTATCTACAATTGGGGt                         >  2:1554739/1‑93 (MQ=255)

                                                                aCTGGAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGAATTTATCAATTTTATCTACAATTGGGGt                         <  1:1272236/93‑1 (MQ=255)

                                                                  tGGAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGAATTTATCAATTTTATCTACAATTGGGGTaa                       <  2:72823/93‑1 (MQ=255)

                                                                  tGGAATCTTTAATGACCGGGACGCGT‑AAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGAATTTATCAATTTTATCTACAATTGGGGTaa                       <  1:3435629/93‑1 (MQ=255)

                                                                   ggAATCTTTAATGCCCGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGAATTTATCAATTTTATCTACAATTGGGGTAAc                      <  2:7099045/93‑1 (MQ=255)

                                                                   ggAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGAATTTATCAATTTTATCTACAATTGGGGTAAc                      <  2:7099044/93‑1 (MQ=255)

                                                                    gAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGAATTTATCANTNTTATTTACAATTGGGGTactg                     >  1:1681909/1‑90 (MQ=255)

                                                                    gAATCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGAATTTATCAATTTTATCTACAATTGGGGTAAcg                     >  1:4838126/1‑93 (MQ=255)

                                                                       tCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGAATTTATCAATTTTATCTACGATTGGGGTAACgcgc                  <  2:5091792/93‑1 (MQ=255)

                                                                       tCTTTAATGACCGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGAATTTATCAATTTTATCTACAATTGGGGTAACgcgc                  >  1:1071930/1‑93 (MQ=255)

                                                                         tttAATGACCGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGAATTTATCAATTTTATCTACAATTGGGGTAACGCGCTg                >  1:3275742/1‑93 (MQ=255)

                                                                          ttAATGACCGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGAATTTATCAATTTTATCTACAATTGGGGTAACGCGCTGa               <  1:7203448/93‑1 (MQ=255)

                                                                           tAATGACCGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGAATTTATCAATTTTATCTACAATTGGGGTAACGCGCTGAc              >  1:2156461/1‑93 (MQ=255)

                                                                             aTGACCGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGAATTTATCAATTTTATCTACAATTGGGGTAACGCGCTGACgg            <  1:3621200/93‑1 (MQ=255)

                                                                               gACCGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGAATTTATCAATTTTATCTACAATTGGGGTAACGCGCTGACGGGa          <  1:2020977/93‑1 (MQ=255)

                                                                               gACCGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGAATTTATCAATTTTATCTACAATTGGGGTAACGCGCTGACGGGa          <  2:936360/93‑1 (MQ=255)

                                                                                aCCGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGAATTTATCAATTTTATCTACAATTGGGGTAACGCGCTGACGGGAg         >  1:6842600/1‑93 (MQ=255)

                                                                                aCCGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGAATTTATCAATTTTATCTACAATTGGGGTAACGCGCTGACGGGAg         >  1:2236786/1‑93 (MQ=255)

                                                                                aCCGGGCCGCG‑GAAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGAATTTATCAATTTTATCTACAATTGGGGTAACGCGCTGACGGGAg         <  1:3623143/93‑1 (MQ=255)

                                                                                  cGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGAATTTATCAATTTTATCTACAATTGGGGTAACGCGCTGACGGGAGTa       >  1:4733855/1‑93 (MQ=255)

                                                                                  cGGGCCGCGT‑AAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGAATTTATCAATTTTATCTACAATTGGGGTAACGCGCTGACGGGAGTa       >  1:5023803/1‑93 (MQ=255)

                                                                                   gggCCGCGT‑AAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGAATTTATCAATTTTATCTACAATTGGGGTAACGCGCTGACGGGAGTaa      <  2:677920/93‑1 (MQ=255)

                                                                                    ggCCGCGT‑AAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGAATTTATCAATTTTATCTACAATTGGGGTAACGCGCTGACGGGAGTaaa     >  1:993287/1‑93 (MQ=255)

                                                                                    ggCCGCGT‑AAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGAATTTATCAATTTTATCTACAATTGGGGTAACGCGCTGACGGGAGTaaa     <  1:7704872/93‑1 (MQ=255)

                                                                                     gCCGCGT‑AAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGAATTTATCAATTTTATCTACAATTGGGGTAACGCGCTGACGGGAGTaaaa    <  1:7869386/93‑1 (MQ=255)

                                                                                       cgcgT‑AAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGAATTTATCAATTTTATCTACAATTGGGGTAACGCGCTGACGGGAGTaaaaaa  >  1:222767/1‑93 (MQ=255)

ATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACGCCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCTGTTCAATGGTTTGATGCCGTGAGGCGAATTTATCAATTTTATCTACAATTGGGGTAACGCGCTGACGGGAGTAAAAAA  >  NC_000913/1605189‑1605369

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`