Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,185,017 Δ1 bp coding (38/339 nt) b2107 → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,185,0140T.100.0% 1029.6 / NA 226coding (35/339 nt)b2107hypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base . (117/109);  total (117/109)

Only 100 of 247 total aligned reads displayed.

TATTGTATGGCAGGAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGCTTTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGTAGT  >  NC_000913/2184922‑2185102
                                                                                            |                                                                                        
tatTGTATGGCAGGAATGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAATATGTTGCTGGGTGCGCt                                                                                          >  2:7016118/1‑93 (MQ=255)
gatTGTATGGCAGGAAAGATATGCGTCTGATATTACAGATCCCCAAAGTGGAGAGTTTATGGCCATTAAAAATTAGATGTTGCTTGGTGAGCt                                                                                          >  2:6754175/2‑93 (MQ=255)
 atTGTATGGCAGGAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGCtt                                                                                         >  1:2870689/1‑93 (MQ=255)
  ttGTATGGCAGGAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGCttt                                                                                        >  2:6116996/1‑93 (MQ=255)
  ttGTATGGCAGGAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGCttt                                                                                        <  1:3512536/93‑1 (MQ=255)
  ttGTATGGCAGGAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTCATGACCATTAAAAATAAGATGTTGCTGGGTGCGCttt                                                                                        <  1:5127818/93‑1 (MQ=255)
    gTATGGCAGGAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGCtttgc                                                                                      <  1:2779846/93‑3 (MQ=255)
      aTGGCAGGAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGCtttgctg                                                                                    <  2:3341223/93‑5 (MQ=255)
      aTGGCAGGAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGCtttgctg                                                                                    <  2:3597468/93‑5 (MQ=255)
            ggAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTAcc                                                                             >  2:3469320/1‑93 (MQ=255)
            ggAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTAcc                                                                             >  2:1392439/1‑93 (MQ=255)
             gAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCa                                                                            >  2:7754861/1‑93 (MQ=255)
              aaaGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAg                                                                           <  1:5359709/93‑1 (MQ=255)
              aaaGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAg                                                                           <  1:3005797/93‑1 (MQ=255)
               aaGATATGCGACTGATATTACAGATCACGAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGGTGGGTGCGC‑TTTGCTGGTTACCAGt                                                                          <  1:1326018/93‑1 (MQ=255)
                   tatGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTgccg                                                                      >  1:595722/1‑93 (MQ=255)
                   tatGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTgccg                                                                      >  2:7250918/1‑93 (MQ=255)
                     tGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTgccgcc                                                                    >  1:1023735/1‑93 (MQ=255)
                     tGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTgccgcc                                                                    <  1:3471092/93‑1 (MQ=255)
                     tGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTgccgcc                                                                    >  2:7689066/1‑93 (MQ=255)
                     tGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTgccgcc                                                                    <  1:1646232/93‑1 (MQ=255)
                      gCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCt                                                                   <  2:4205161/93‑1 (MQ=255)
                       cGACTGATATTACAGATCCCCACAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTg                                                                  <  1:520312/93‑1 (MQ=255)
                        gACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTgg                                                                 >  1:3707690/1‑93 (MQ=255)
                        gACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTgg                                                                 <  1:6446852/93‑1 (MQ=255)
                         aCTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTggg                                                                >  2:5749273/1‑93 (MQ=255)
                         aCTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTggg                                                                <  1:4229959/93‑1 (MQ=255)
                              tatTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCa                                                           >  2:4245499/1‑93 (MQ=255)
                              tatTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCa                                                           >  2:5401295/1‑93 (MQ=255)
                                ttACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCAcc                                                         >  1:5442322/1‑93 (MQ=255)
                                 tACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCa                                                        >  1:1770135/1‑93 (MQ=255)
                                  aCAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAg                                                       >  2:3164740/1‑93 (MQ=255)
                                     gATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCa                                                    >  2:1108860/1‑93 (MQ=255)
                                     gATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCa                                                    >  1:5372029/1‑93 (MQ=255)
                                       tCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCAcc                                                  >  1:1928641/1‑93 (MQ=255)
                                          ccAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACcgcg                                               >  2:1158335/1‑93 (MQ=255)
                                           cAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCgg                                              >  2:2884854/1‑93 (MQ=255)
                                             aaGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGt                                            >  1:776124/1‑93 (MQ=255)
                                             aaGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGt                                            <  2:166302/93‑1 (MQ=255)
                                              aGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGtt                                           <  2:6545186/93‑1 (MQ=255)
                                                  gagaGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGAc                                       <  1:5742352/93‑1 (MQ=255)
                                                      gTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAAt                                   >  1:331509/1‑93 (MQ=255)
                                                      gTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAAt                                   >  2:7915169/1‑93 (MQ=255)
                                                      gTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAAt                                   >  2:3793107/1‑93 (MQ=255)
                                                       tttATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATa                                  >  2:21672/1‑93 (MQ=255)
                                                        ttATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATAc                                 >  2:4329718/1‑93 (MQ=255)
                                                        ttATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATAc                                 >  1:1226073/1‑93 (MQ=255)
                                                        ttATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATAc                                 <  1:5714458/93‑1 (MQ=255)
                                                        ttATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATAc                                 <  1:1828012/93‑1 (MQ=255)
                                                         tATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATAcc                                <  2:1547477/93‑1 (MQ=255)
                                                         tATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATAcc                                >  1:4292050/1‑93 (MQ=255)
                                                          aTGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCt                               <  1:5999207/93‑1 (MQ=255)
                                                           tGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTc                              <  1:1497005/93‑1 (MQ=255)
                                                           tGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTc                              <  2:2447595/93‑1 (MQ=255)
                                                           tGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTc                              <  2:2272150/93‑1 (MQ=255)
                                                           tGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTc                              <  2:6479790/93‑1 (MQ=255)
                                                            gACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCg                             <  2:748582/93‑1 (MQ=255)
                                                              ccATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCggg                           >  2:1243082/1‑93 (MQ=255)
                                                               cATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGa                          >  2:5018427/1‑93 (MQ=255)
                                                                aTTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGaa                         >  1:6884893/1‑93 (MQ=255)
                                                                aTTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGaa                         <  2:5929281/93‑1 (MQ=255)
                                                                aTTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGaa                         <  1:6962320/93‑1 (MQ=255)
                                                                aTTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGaa                         <  1:4815327/93‑1 (MQ=255)
                                                                aTTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGaa                         <  1:4074857/93‑1 (MQ=255)
                                                                aTTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGaa                         >  2:4066812/1‑93 (MQ=255)
                                                                 ttAAAAGTAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAAt                        <  2:4751524/93‑1 (MQ=255)
                                                                   aaaaaTAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAAttt                      <  2:5016603/93‑1 (MQ=255)
                                                                    aaaaTAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTc                     <  2:1987349/93‑1 (MQ=255)
                                                                    aaaaTAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTc                     >  2:7331145/1‑93 (MQ=255)
                                                                     aaaTAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCTTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCt                    <  2:6928431/93‑1 (MQ=255)
                                                                      aaTAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTa                   >  1:6531023/1‑93 (MQ=255)
                                                                       aTAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTaa                  <  2:6329238/93‑1 (MQ=255)
                                                                       aTAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTaa                  <  2:5299212/93‑1 (MQ=255)
                                                                       aTAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTaa                  <  1:7456531/93‑1 (MQ=255)
                                                                         aaGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGt                >  2:2699138/1‑93 (MQ=255)
                                                                         aaGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGt                <  1:6748297/93‑1 (MQ=255)
                                                                          aGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTa               <  1:3626364/93‑1 (MQ=255)
                                                                          aGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTa               >  1:212218/1‑93 (MQ=255)
                                                                           gATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTAt              <  1:1149974/93‑1 (MQ=255)
                                                                           gATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTAt              >  2:6029238/1‑93 (MQ=255)
                                                                             tGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGa            >  2:1945019/1‑93 (MQ=255)
                                                                             tGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGa            >  1:2358246/1‑93 (MQ=255)
                                                                             tGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGa            >  1:4474072/1‑93 (MQ=255)
                                                                             tGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGa            <  1:5076445/93‑1 (MQ=255)
                                                                             tGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGa            <  1:669095/93‑1 (MQ=255)
                                                                              gTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAg           <  1:13126/93‑1 (MQ=255)
                                                                              gTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAg           <  1:487743/93‑1 (MQ=255)
                                                                               ttGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGt          <  1:93046/93‑1 (MQ=255)
                                                                               ttGCTGGGTGCGC‑TTGCCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGt          <  1:4287502/93‑1 (MQ=255)
                                                                                tGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGtt         <  1:830351/93‑1 (MQ=255)
                                                                                  cTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTaa       <  1:5536249/93‑1 (MQ=255)
                                                                                  cTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTaa       <  1:231270/93‑1 (MQ=255)
                                                                                   tGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAag      >  1:326669/1‑93 (MQ=255)
                                                                                     ggTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAagca    >  2:6701494/1‑91 (MQ=255)
                                                                                     ggTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAagca    <  1:4701438/93‑3 (MQ=255)
                                                                                     ggTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAagca    >  2:7432208/1‑91 (MQ=255)
                                                                                     ggTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAagca    <  2:7842997/93‑3 (MQ=255)
                                                                                     ggTGCGC‑TTGGCTGGTTACCATTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAagca    <  2:1419393/93‑3 (MQ=255)
                                                                                       tGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAagcagt  <  2:1843032/93‑1 (MQ=255)
                                                                                       tGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAagcagt  <  2:4256813/93‑1 (MQ=255)
                                                                                            |                                                                                        
TATTGTATGGCAGGAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGCTTTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGTAGT  >  NC_000913/2184922‑2185102

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑