BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,812,859	Δ1 bp	intergenic (‑105/+46)	ygaG ← / ← gshA	hypothetical protein/gamma‑glutamate‑cysteine ligase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,812,858	0	C	.	100.0%	1236.8 / NA	271	intergenic (‑104/+47)	ygaG/gshA	hypothetical protein/gamma‑glutamate‑cysteine ligase
Reads supporting (aligned to +/- strand): ref base C (0/0); new base . (176/95); total (176/95)

Only 100 of 286 total aligned reads displayed.

GGTAATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCGGTATCA  >  NC_000913/2812767‑2812947

ggTAATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATTca                                                                                          <  1:914774/93‑2 (MQ=255)

ggTAATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATTca                                                                                          <  1:671778/93‑2 (MQ=255)

ggTAATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATTca                                                                                          >  2:6203938/1‑92 (MQ=255)

  tAATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTcaga                                                                                        <  2:2902385/93‑4 (MQ=255)

     tttttttAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGAt                                                                                    >  1:784975/1‑93 (MQ=255)

     tttttttAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGAt                                                                                    >  2:5516101/1‑93 (MQ=255)

     tttttttAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCCGAATT‑CAGAGAt                                                                                    >  2:4266389/1‑93 (MQ=255)

       tttttAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGa                                                                                  >  1:1384052/1‑93 (MQ=255)

        ttttAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGaa                                                                                 >  1:6647882/1‑93 (MQ=255)

         tttAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGaaa                                                                                <  2:1570614/93‑1 (MQ=255)

          ttAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAAt                                                                               <  1:4975956/93‑1 (MQ=255)

          ttAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAAt                                                                               >  2:5762223/1‑93 (MQ=255)

           tAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAAtt                                                                              <  2:4932267/93‑1 (MQ=255)

           tAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAAtt                                                                              <  1:1590909/93‑1 (MQ=255)

           tAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAAtt                                                                              <  1:1540659/93‑1 (MQ=255)

                aTTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGc                                                                         >  2:6029637/1‑93 (MQ=255)

                  tttCTGAACTCTTTCTTCCCCGGCGAGTCTGAGCATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCa                                                                       >  1:3991332/1‑93 (MQ=255)

                  tttCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCa                                                                       >  2:2313530/1‑93 (MQ=255)

                   ttCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCAc                                                                      >  1:3523260/1‑93 (MQ=255)

                     cTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTc                                                                    >  2:6388840/1‑93 (MQ=255)

                     cTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTc                                                                    >  1:5975589/1‑93 (MQ=255)

                      tGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCa                                                                   >  1:1745480/1‑93 (MQ=255)

                      tGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCa                                                                   >  2:6432128/1‑93 (MQ=255)

                      tGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCa                                                                   <  1:6304679/93‑1 (MQ=255)

                      tGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCa                                                                   >  1:1307315/1‑93 (MQ=255)

                      tGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCa                                                                   <  2:286604/93‑1 (MQ=255)

                        aaCTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACg                                                                 <  1:3264396/93‑1 (MQ=255)

                         aCTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGa                                                                <  2:707562/93‑1 (MQ=255)

                          ctctTTCTT‑CCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACgggg                                                              >  2:1961772/1‑90 (MQ=255)

                           tctttcttCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGt                                                              >  1:7450584/1‑93 (MQ=255)

                            ctttcttCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTg                                                             <  2:1312941/93‑1 (MQ=255)

                               tcttcCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAGATTTTGGCCACTCACGAGTGGcc                                                          >  2:4968168/1‑93 (MQ=255)

                               tcttcCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGcc                                                          <  2:316897/93‑1 (MQ=255)

                               tcttcCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGcc                                                          <  2:1934239/93‑1 (MQ=255)

                                cttcCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCt                                                         <  1:449984/93‑1 (MQ=255)

                                 ttcCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCtt                                                        >  2:3382207/1‑93 (MQ=255)

                                 ttcCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCtt                                                        >  2:4805913/1‑93 (MQ=255)

                                  tcCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCttt                                                       <  1:6587104/93‑1 (MQ=255)

                                     cAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTttttc                                                    >  1:4308151/1‑93 (MQ=255)

                                     cAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTttttc                                                    >  1:6921277/1‑93 (MQ=255)

                                      aGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTttttct                                                   <  2:919628/93‑1 (MQ=255)

                                      aGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTttttct                                                   <  2:6638557/93‑1 (MQ=255)

                                        gCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTttttcttt                                                 >  2:1441864/1‑93 (MQ=255)

                                         cGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTttttctttt                                                <  2:2638724/93‑1 (MQ=255)

                                         cGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTttttctttt                                                <  1:4635740/93‑1 (MQ=255)

                                          gAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTttttcttttc                                               <  1:2457357/93‑1 (MQ=255)

                                          gAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTttttcttttc                                               <  1:211418/93‑1 (MQ=255)

                                          gAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTttttcttttc                                               >  1:122529/1‑93 (MQ=255)

                                            gTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTg                                             >  2:3343378/1‑93 (MQ=255)

                                              cTGAGTATATGAAAGACGCGCATTTGTTATCATCGCCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTTGCCTTTTTCTTTTCTGTc                                           <  2:3924085/93‑1 (MQ=255)

                                               tGAGTATATGAAAGACGCGCATTTGTTATCATCTCCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCa                                          <  2:3017303/93‑1 (MQ=255)

                                                gAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAg                                         <  2:4168615/93‑1 (MQ=255)

                                                gAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAg                                         >  1:6203063/1‑93 (MQ=255)

                                                gAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAg                                         >  2:173514/1‑93 (MQ=255)

                                                  gTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGc                                       <  1:3972412/93‑1 (MQ=255)

                                                     tatGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGGCACTCACGAGCGGCCTTTTTCTTTTATGTCAGGCgtg                                    >  1:2978822/1‑93 (MQ=255)

                                                     tatGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCgtg                                    >  1:7260535/1‑93 (MQ=255)

                                                      atGAAAGACGCGCTTTTGTTATCATCTCCCCTGAAGT‑CAGAGATGAAGTTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCgtgt                                   <  1:581375/93‑1 (MQ=255)

                                                      atGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCgtgt                                   >  2:6493807/1‑93 (MQ=255)

                                                      atGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCgtgt                                   >  2:2600635/1‑93 (MQ=255)

                                                       tGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGtt                                  >  2:3673771/1‑93 (MQ=255)

                                                       tGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGtt                                  >  2:1074217/1‑93 (MQ=255)

                                                        gAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGttt                                 >  1:5381151/1‑93 (MQ=255)

                                                         aaaGACGCGCATTTGTTATCATCATCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGtttt                                >  1:2608269/1‑93 (MQ=255)

                                                         aaaGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGtttt                                <  2:893825/93‑1 (MQ=255)

                                                          aaGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGttttt                               <  2:6838890/93‑1 (MQ=255)

                                                           aGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTc                              <  1:6781019/93‑1 (MQ=255)

                                                           aGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTc                              >  1:5557828/1‑93 (MQ=255)

                                                           aGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTc                              >  1:843049/1‑93 (MQ=255)

                                                            gACGCGAATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTcc                             >  2:7892853/1‑93 (MQ=255)

                                                              cgcgCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAg                           >  1:4042219/1‑93 (MQ=255)

                                                              cgcgCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAg                           >  2:253150/1‑93 (MQ=255)

                                                                 gcATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCca                        >  2:6750586/1‑93 (MQ=255)

                                                                 gcATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCca                        >  2:3499740/1‑93 (MQ=255)

                                                                  cATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCcac                       >  2:6271649/1‑93 (MQ=255)

                                                                   aTTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCcaca                      <  2:7102186/93‑1 (MQ=255)

                                                                    tttGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCa                                          >  1:1097721/1‑72 (MQ=255)

                                                                    tttGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCacac                     <  2:5093686/93‑1 (MQ=255)

                                                                    tttGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCacac                     >  1:393982/1‑93 (MQ=255)

                                                                     ttGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACAcc                    >  1:2896062/1‑93 (MQ=255)

                                                                     ttGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACAcc                    <  2:5336777/93‑1 (MQ=255)

                                                                      tGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTTCAGCCACACCg                   >  2:4314674/1‑93 (MQ=255)

                                                                       gTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGc                  >  1:6361159/1‑93 (MQ=255)

                                                                         tATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCaa                >  1:1657479/1‑93 (MQ=255)

                                                                         tATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCaa                >  2:7581230/1‑93 (MQ=255)

                                                                          atcatcaccCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCaaa               >  2:4201543/1‑93 (MQ=255)

                                                                          atcatcaccCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCaaa               >  1:2693593/1‑93 (MQ=255)

                                                                           tcatcaccCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAAc              >  2:3835610/1‑93 (MQ=255)

                                                                           tcatcaccCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAAc              <  1:5303361/93‑1 (MQ=255)

                                                                             atcaccCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACgg            >  1:1466356/1‑93 (MQ=255)

                                                                             atcaccCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACgg            >  2:221464/1‑93 (MQ=255)

                                                                             atcaccCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACgg            >  2:1605048/1‑93 (MQ=255)

                                                                             atcaccCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACgg            >  2:1166492/1‑93 (MQ=255)

                                                                              tcaccCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGt           >  1:2829305/1‑93 (MQ=255)

                                                                                cccccTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTc         <  2:2166447/91‑1 (MQ=255)

                                                                                   ccTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCGGt      >  1:5729971/1‑93 (MQ=255)

                                                                                   ccTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGGGTTTTTCCAGCCACACCGCAAACGGTTCGGt      >  1:1939159/1‑93 (MQ=255)

                                                                                    cTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCGGTa     >  1:7610459/1‑93 (MQ=255)

                                                                                     tGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCGGTAt    >  2:6815928/1‑93 (MQ=255)

                                                                                      gAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCGGTATc   <  1:3621164/93‑1 (MQ=255)

GGTAATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCGGTATCA  >  NC_000913/2812767‑2812947

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`