BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,236,735	+C	coding (514/966 nt)	ygjT →	putative transport protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,236,734	1	.	C	100.0%	976.3 / NA	313	K171N (AAG→AAC)	ygjT	putative transport protein
Reads supporting (aligned to +/- strand): ref base . (0/0); new base C (147/166); total (147/166)

Only 100 of 355 total aligned reads displayed.

GACTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAG‑CGCTGGTGCGCTGGCTACGCGGTTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGT  >  NC_000913/3236642‑3236822

gACTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAg                                                                                           <  2:5736449/93‑1 (MQ=255)

 aCTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAg‑c                                                                                         >  2:955450/1‑93 (MQ=255)

 aCTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAg‑c                                                                                         <  2:71257/93‑1 (MQ=255)

 aCTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAg‑c                                                                                         >  2:233839/1‑93 (MQ=255)

 aCTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAg‑c                                                                                         >  2:3707052/1‑93 (MQ=255)

   tGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAg‑ccg                                                                                       <  2:5956739/93‑3 (MQ=255)

   tGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAg‑ccg                                                                                       >  2:3013212/1‑91 (MQ=255)

     gATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAg‑ccgct                                                                                     >  1:7812820/1‑89 (MQ=255)

     gATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAg‑ccgct                                                                                     >  2:4301740/1‑89 (MQ=255)

       tCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTgg                                                                                    <  2:7386090/93‑1 (MQ=255)

        ccTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGt                                                                                   <  1:415281/93‑1 (MQ=255)

          tGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTTGCGACAAGCCGCTGGGgc                                                                                 >  1:2462200/1‑93 (MQ=255)

          tGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTgc                                                                                 >  1:1017396/1‑93 (MQ=255)

          tGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTgc                                                                                 <  1:5784634/93‑1 (MQ=255)

          tGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTgc                                                                                 >  2:4884411/1‑93 (MQ=255)

          tGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGATCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTgc                                                                                 >  1:5888047/1‑93 (MQ=255)

            tataTCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTgcgc                                                                               >  2:581864/1‑93 (MQ=255)

             atatCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCt                                                                              <  2:3154248/93‑1 (MQ=255)

             atatCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCt                                                                              >  1:4283193/1‑93 (MQ=255)

                  ttCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTa                                                                         >  2:6443583/1‑93 (MQ=255)

                  ttCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTa                                                                         <  2:6450341/93‑1 (MQ=255)

                   tCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTAc                                                                        <  1:1155176/93‑1 (MQ=255)

                     ggTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTAcgc                                                                      >  2:568918/1‑93 (MQ=255)

                      gTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTAcgcg                                                                     >  1:3184034/1‑93 (MQ=255)

                       tGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCgg                                                                    <  2:6375502/93‑1 (MQ=255)

                        gCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGt                                                                   <  1:3497964/93‑1 (MQ=255)

                         ccTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGtc                                                                  >  1:480161/1‑92 (MQ=255)

                          cTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGtca                                                                 <  2:1015231/93‑3 (MQ=255)

                           ttCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGtcat                                                                >  2:1625312/1‑90 (MQ=255)

                            tCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGtcatt                                                               >  1:4532701/1‑89 (MQ=255)

                              ctgctgTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTg                                                            >  2:5756830/1‑93 (MQ=255)

                               tgctgTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTgc                                                           >  1:1804939/1‑93 (MQ=255)

                                 ctgTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTgcgc                                                         >  1:6028112/1‑93 (MQ=255)

                                  tgTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCa                                                        >  2:7906384/1‑93 (MQ=255)

                                  tgTTTACCGGCGTGAAGATGGCCCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCa                                                        <  2:2855415/93‑1 (MQ=255)

                                   gTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCAt                                                       <  2:6998265/93‑1 (MQ=255)

                                   gTTTACCGGCGTGAAGATGGCGCTCCGCCATGAAGATGAATCAGGCAGTGGCGGCAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCAt                                                       >  1:3038452/1‑93 (MQ=255)

                                    tttACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATg                                                      <  1:4004007/93‑1 (MQ=255)

                                    ttgaCCGGCGGGAAGATGGCGCTCGCCCATGAAGATTAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGATACGCGG‑TCATTTGCGCATg                                                      <  2:4767431/90‑1 (MQ=255)

                                      tACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGAc                                                    <  2:3634413/93‑1 (MQ=255)

                                      tACCGGCGTGAAGATGGCGCTCACCCATGAAGATTAATCAGGCTTTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGAc                                                    <  1:6308903/93‑1 (MQ=255)

                                        ccGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCg                                                  <  1:4424756/93‑1 (MQ=255)

                                         cGGGGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGa                                                 <  1:2104015/93‑1 (MQ=255)

                                          ggCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGac                                                >  2:1403182/1‑93 (MQ=255)

                                          ggCGGGAAGATGGCGCCCCCCAATGAAGATGAATCAGGCATTGGCAACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGac                                                <  2:7265755/93‑1 (MQ=255)

                                           gCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGaca                                               <  1:7166516/93‑1 (MQ=255)

                                            cGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGacac                                              <  2:5432141/93‑1 (MQ=255)

                                            cGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGacac                                              <  2:2156268/93‑1 (MQ=255)

                                             gTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACAcc                                             >  1:2617937/1‑93 (MQ=255)

                                              tGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCa                                            >  1:1732283/1‑93 (MQ=255)

                                               gAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCAt                                           >  1:7594836/1‑93 (MQ=255)

                                               gAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCAt                                           <  1:6709288/93‑1 (MQ=255)

                                                aaGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATc                                          <  2:2666410/93‑1 (MQ=255)

                                                 aGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCg                                         <  1:6875190/93‑1 (MQ=255)

                                                  gATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCGTGACCGACACCATCGa                                        >  1:6788965/1‑93 (MQ=255)

                                                  aaTGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGa                                        <  2:1498313/92‑1 (MQ=255)

                                                   aTGGCGCCAGCCCATGAAGATGAACCAGGCATTGGCAACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGAc                                       <  1:2363504/93‑1 (MQ=255)

                                                     ggCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACaa                                     <  2:4961397/93‑1 (MQ=255)

                                                     ggCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACaa                                     >  2:3990334/1‑93 (MQ=255)

                                                       cgcTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACg                                   <  2:4148927/93‑1 (MQ=255)

                                                         cTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAg                                 <  1:5449971/93‑1 (MQ=255)

                                                           cGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCa                               <  2:4049895/93‑1 (MQ=255)

                                                            gCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACGACGAGCAt                              <  1:6311933/93‑1 (MQ=255)

                                                             cccATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCAtt                             >  1:5089927/1‑93 (MQ=255)

                                                             cccATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCAtt                             <  2:2922669/93‑1 (MQ=255)

                                                             cccATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCAtt                             <  1:6550196/93‑1 (MQ=255)

                                                              ccATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCAttt                            >  1:1391269/1‑93 (MQ=255)

                                                               cATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTc                           >  2:1289122/1‑93 (MQ=255)

                                                               cATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTc                           <  2:5223535/93‑1 (MQ=255)

                                                                aTGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCt                          <  1:1530023/93‑1 (MQ=255)

                                                                 tGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCtt                         >  1:7350602/1‑93 (MQ=255)

                                                                 tGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCtt                         <  1:3675343/93‑1 (MQ=255)

                                                                  gAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCttt                        <  2:7484297/93‑1 (MQ=255)

                                                                    aGATGAATCAGGCATTGTCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTtgt                      <  2:5101164/93‑1 (MQ=255)

                                                                    aGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTtgt                      <  1:2710354/93‑1 (MQ=255)

                                                                     gATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTtgtg                     >  1:7926244/1‑93 (MQ=255)

                                                                      aTGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGc                    <  1:7422733/93‑1 (MQ=255)

                                                                      aTGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGc                    >  2:572129/1‑93 (MQ=255)

                                                                       tGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCg                   >  1:3832569/1‑93 (MQ=255)

                                                                        gAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGt                  >  1:2954717/1‑93 (MQ=255)

                                                                           tCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAg               >  2:6860608/1‑93 (MQ=255)

                                                                            cAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGa              >  2:6286226/1‑93 (MQ=255)

                                                                             aGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGaa             >  1:6683757/1‑93 (MQ=255)

                                                                             aGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGaa             <  1:1948855/93‑1 (MQ=255)

                                                                             aGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGaa             <  1:5553001/93‑1 (MQ=255)

                                                                              ggCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAAt            <  2:2276900/93‑1 (MQ=255)

                                                                               gCATGGGCCACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATg           <  1:4953038/93‑1 (MQ=255)

                                                                                 atgggCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGa         <  2:4643025/90‑1 (MQ=255)

                                                                                 aTTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGa         >  2:7860586/1‑93 (MQ=255)

                                                                                  ttGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGAt        >  1:7774891/1‑93 (MQ=255)

                                                                                  ttGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGAt        <  2:1862595/93‑1 (MQ=255)

                                                                                  ttGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGAt        <  2:2018646/93‑1 (MQ=255)

                                                                                  ttGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGAt        >  1:6964017/1‑93 (MQ=255)

                                                                                  ttGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGAt        >  2:2498423/1‑93 (MQ=255)

                                                                                  ttGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGAt        >  2:772461/1‑93 (MQ=255)

                                                                                  tgggCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGAt        <  1:5252022/91‑1 (MQ=255)

                                                                                   tGGCAACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGAtt       <  2:3060322/93‑1 (MQ=255)

                                                                                    ggCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTg      <  1:754092/93‑1 (MQ=255)

                                                                                        aCAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGt  <  1:3593920/93‑1 (MQ=255)

                                                                                        aCAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCAACGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGt  >  2:3925786/1‑93 (MQ=255)

GACTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAG‑CGCTGGTGCGCTGGCTACGCGGTTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGT  >  NC_000913/3236642‑3236822

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`