Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,430,453 +C coding (745/747 nt) smf ← putative Rossmann‑fold nucleotide‑binding protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,430,4531.C99.2% 835.0 / ‑1.8 267coding (745/747 nt)smfputative Rossmann‑fold nucleotide‑binding protein
Reads supporting (aligned to +/- strand):  ref base . (1/1);  new base C (155/110);  total (156/111)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.73e-01

Only 100 of 296 total aligned reads displayed.

GAATTTCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCTT  >  NC_000913/3430361‑3430539
                                                                                             |                                                                                      
 aaTTTCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAggc                                                                                        <  1:6808775/93‑2 (MQ=255)
   tttCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTggcaaggcaa                                                                                     >  2:6001680/1‑93 (MQ=255)
      cttcCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGcaaaaa                                                                                  >  1:4494683/1‑92 (MQ=255)
      cttcCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGcaaaaa                                                                                  <  2:559629/93‑2 (MQ=255)
       ttcCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAAc                                                                                  <  1:2545655/93‑1 (MQ=255)
       ttcCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGcaaaaac                                                                                 >  2:4532128/1‑91 (MQ=255)
        tcCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACt                                                                                 >  1:1088859/1‑93 (MQ=255)
          cGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTtc                                                                               <  2:3344060/93‑1 (MQ=255)
           ggTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTtct                                                                              <  1:7136945/93‑1 (MQ=255)
           ggTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTtct                                                                              >  1:3753022/1‑93 (MQ=255)
            gTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTtctc                                                                             <  2:1272924/93‑1 (MQ=255)
             ttCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCg                                                                            >  1:2211433/1‑93 (MQ=255)
             ttCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCg                                                                            >  1:1461320/1‑93 (MQ=255)
                cGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGccc                                                                         >  1:5546244/1‑93 (MQ=255)
                  tCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCTGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCt                                                                       <  1:3373077/93‑1 (MQ=255)
                  tCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCt                                                                       >  2:2232471/1‑93 (MQ=255)
                   cacaAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTg                                                                      >  1:3794334/1‑93 (MQ=255)
                   cacaAGAAGCGCGCCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTg                                                                      <  2:4377135/93‑1 (MQ=255)
                    acaAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGc                                                                     >  2:4322734/1‑93 (MQ=255)
                    acaAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGc                                                                     <  2:1371047/93‑1 (MQ=255)
                    acaAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGc                                                                     <  2:3962490/93‑1 (MQ=255)
                    acaAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGc                                                                     <  2:5854223/93‑1 (MQ=255)
                    acaAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGc                                                                     >  2:1631652/1‑93 (MQ=255)
                     caAGAATCGCACCTTGTTTTATTACCCAGTGAGGCCCTTCGCTCCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCt                                                                    <  2:2828645/93‑1 (MQ=255)
                      aaGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTc                                                                   >  1:7542955/1‑93 (MQ=255)
                       aGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCa                                                                  <  1:5362721/93‑1 (MQ=255)
                        gAATCGCACCTTGTTTTATTAACCAGTGAGGCCGTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCaa                                                                 <  2:6128974/93‑1 (MQ=255)
                        gAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCaa                                                                 >  2:7681269/1‑93 (MQ=255)
                        aaaccGCCCCTTTTTTTATTAACCAGTGAGGCCCTTCGCTCCCCGGATCCCCTATTGGCCCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCaa                                                                 <  2:3005135/89‑1 (MQ=255)
                         aaTCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAg                                                                >  1:6247202/1‑93 (MQ=255)
                          aTCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAgc                                                               >  2:7056322/1‑93 (MQ=255)
                           tCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCACTGCTCAAgcg                                                              >  2:7378629/1‑93 (MQ=255)
                             gCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGca                                                            >  2:3202620/1‑93 (MQ=255)
                               aCCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGcaca                                                          >  1:1101405/1‑93 (MQ=255)
                                ccTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACaa                                                         >  1:7420392/1‑93 (MQ=255)
                                ccTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACaa                                                         >  1:4245087/1‑93 (MQ=255)
                                 cTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGCCCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAAc                                                        <  2:42123/93‑1 (MQ=255)
                                  ttGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACg                                                       <  2:2751384/93‑1 (MQ=255)
                                   tggtttATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGt                                                      <  1:3191475/90‑1 (MQ=255)
                                    gTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTg                                                     <  2:3770226/93‑1 (MQ=255)
                                       ttattaACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTg                                                  <  2:4646558/93‑1 (MQ=255)
                                        tattaACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGt                                                 <  2:1188365/93‑1 (MQ=255)
                                         attaACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTc                                                >  1:2666632/1‑93 (MQ=255)
                                          ttaACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCa                                               >  1:5973767/1‑93 (MQ=255)
                                          ttaACCAGTGAGGCCCTTCGCTTCCCGGAGTCCCTATTGGACCTGGCAAGGCAAAAACTGCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCa                                               >  1:7028176/1‑93 (MQ=255)
                                            aaCCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTTCTGTCAcc                                             <  1:666375/93‑1 (MQ=255)
                                            aaCCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCAcc                                             <  2:3569781/93‑1 (MQ=255)
                                            aaCCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCAcc                                             >  2:2610903/1‑93 (MQ=255)
                                             aCCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCa                                            <  2:5239877/93‑1 (MQ=255)
                                             aCCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCa                                            <  1:2403561/93‑1 (MQ=255)
                                                aGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCg                                         >  1:4875808/1‑93 (MQ=255)
                                                 gTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCCCCAGCGa                                        >  1:2313154/1‑93 (MQ=255)
                                                 gTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGa                                        >  2:7428516/1‑93 (MQ=255)
                                                  tGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGaa                                       <  1:514811/93‑1 (MQ=255)
                                                  tGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGaa                                       >  1:3314782/1‑93 (MQ=255)
                                                    aGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAAcc                                     <  1:1647174/93‑1 (MQ=255)
                                                     ggCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCa                                    <  1:7867527/93‑1 (MQ=255)
                                                      gCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCAc                                   >  2:6484565/1‑93 (MQ=255)
                                                        ccTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTTCTGTCACCAGCGAACCACTa                                 <  1:4578720/93‑1 (MQ=255)
                                                        ccTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTa                                 >  1:959865/1‑93 (MQ=255)
                                                        ccTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTa                                 >  1:3996650/1‑93 (MQ=255)
                                                         cTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTAc                                >  2:5029199/1‑93 (MQ=255)
                                                         cTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTAc                                <  2:5316811/93‑1 (MQ=255)
                                                         cTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTAc                                <  1:7788607/93‑1 (MQ=255)
                                                         cTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTAc                                >  1:4998146/1‑93 (MQ=255)
                                                         cTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTAc                                >  1:6487356/1‑93 (MQ=255)
                                                          ttCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACg                               >  1:3856912/1‑93 (MQ=255)
                                                          ttCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACg                               >  1:6882201/1‑93 (MQ=255)
                                                             gCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCaa                            >  1:1293323/1‑93 (MQ=255)
                                                             gCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCaa                            <  1:5879295/93‑1 (MQ=255)
                                                             gCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCaa                            >  2:4084888/1‑93 (MQ=255)
                                                              cTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCaaa                           <  2:7229420/93‑1 (MQ=255)
                                                              cTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCaaa                           <  1:3472965/93‑1 (MQ=255)
                                                               ttCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAg                          >  2:995172/1‑93 (MQ=255)
                                                               ttCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAg                          <  1:1191843/93‑1 (MQ=255)
                                                                tCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGc                         <  1:2142928/93‑1 (MQ=255)
                                                                   cGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGc                      >  1:2704368/1‑93 (MQ=255)
                                                                     gATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCtt                    >  2:7857499/1‑93 (MQ=255)
                                                                       ttCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTcc                  >  1:4316932/1‑93 (MQ=255)
                                                                        tCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTcca                 <  2:1690144/93‑1 (MQ=255)
                                                                        tCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTcca                 <  2:5442113/93‑1 (MQ=255)
                                                                          ccTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTccacc               >  2:6537705/1‑93 (MQ=255)
                                                                            tATTGGACCTGGCAAGGCAAAAACTTGTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTccaccac             <  2:5670354/93‑1 (MQ=255)
                                                                            tATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTccaccac             >  1:5281128/1‑93 (MQ=255)
                                                                            tATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTccaccac             <  2:1116188/93‑1 (MQ=255)
                                                                            tATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTccaccac             <  1:313559/93‑1 (MQ=255)
                                                                            tATTGGACCTGCCGAGGCAAAAACTTCACGCCCCTGCTCAAAAACACAACGTGCTGTCACCAGCGAACCACTACGCAAAGACCCTTcgaccac             >  2:3137865/1‑93 (MQ=255)
                                                                             aTTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTccaccacc            >  2:1516730/1‑93 (MQ=255)
                                                                             aTTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTccaccacc            >  1:4907025/1‑93 (MQ=255)
                                                                             aTTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTccaccacc            >  1:766435/1‑93 (MQ=255)
                                                                             aTTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTccaccacc            <  1:6082505/93‑1 (MQ=255)
                                                                                  aCCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTac       >  2:2003895/1‑93 (MQ=255)
                                                                                  aCCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTac       >  2:6618152/1‑93 (MQ=255)
                                                                                    cTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTacac     >  2:6844241/1‑93 (MQ=255)
                                                                                    cTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTacac     >  1:2025019/1‑93 (MQ=255)
                                                                                    cTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTacac     >  1:7916553/1‑93 (MQ=255)
                                                                                     tGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCCGAGCCGCTTCAGCCACCAGTACAcc    >  1:3002997/1‑93 (MQ=255)
                                                                                      ggcaaggcaaAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCt   >  2:3893257/1‑93 (MQ=255)
                                                                                       gCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCtt  <  1:1866413/93‑1 (MQ=255)
                                                                                       gCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCtt  <  1:6589749/93‑1 (MQ=255)
                                                                                             |                                                                                      
GAATTTCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCTT  >  NC_000913/3430361‑3430539

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: