BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,544,360	+G	coding (166/1314 nt)	gntT →	gluconate permease

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,544,358	1	.	G	100.0%	910.5 / NA	289	A55G (GCG→GGG)	gntT	gluconate permease
Reads supporting (aligned to +/- strand): ref base . (0/0); new base G (150/139); total (150/139)

Only 100 of 296 total aligned reads displayed.

TCGTGGCGCTTGCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTC‑‑GC‑GGACG‑TCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACTGCGGTGGCGCACAA  >  NC_000913/3544283‑3544437

tCGTGGCGCTTGCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGcc                                                                   <  1:4484396/93‑1 (MQ=255)

tCGTGGCGCTTGCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGcc                                                                   <  1:1949978/93‑1 (MQ=255)

ccGTGGCGCTTGCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGcc                                                                   <  1:3240745/92‑1 (MQ=255)

  gTGGCGCTTGCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCtt                                                                 <  2:6319068/93‑1 (MQ=255)

   tGGCGCTTGCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTg                                                                <  1:3632127/93‑1 (MQ=255)

   tGGCGCTTGCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTg                                                                >  2:3902389/1‑93 (MQ=255)

    ggCGCTTGCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGc                                                               >  2:2367301/1‑93 (MQ=255)

     gcgcTTGCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGcc                                                              >  2:1241617/1‑93 (MQ=255)

     gcgcTTGCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGcc                                                              >  2:5680475/1‑93 (MQ=255)

     gcgcTTGCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGcc                                                              >  2:4935779/1‑93 (MQ=255)

      cgcTTGCTGTTGGATTAGTGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGccc                                                             <  1:7037318/93‑1 (MQ=255)

       gcTTGCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCt                                                            >  2:202/1‑93 (MQ=255)

         ttGCTGTTGGATTAATGCAAGGAATGCGGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGa                                                          <  1:4871314/93‑1 (MQ=255)

         ttGCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGa                                                          >  1:7536211/1‑93 (MQ=255)

         ttGCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGa                                                          <  2:113201/93‑1 (MQ=255)

          tGCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGAt                                                         <  1:6521798/93‑1 (MQ=255)

          tGCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGAt                                                         >  1:1340980/1‑93 (MQ=255)

           gCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATc                                                        >  1:2982118/1‑93 (MQ=255)

           gCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATc                                                        <  2:5482383/93‑1 (MQ=255)

            cTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCa                                                       >  2:6867796/1‑93 (MQ=255)

             tGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCAt                                                      <  2:3080088/93‑1 (MQ=255)

              gTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATg                                                     <  2:1837916/93‑1 (MQ=255)

              gTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATg                                                     >  1:5561736/1‑93 (MQ=255)

              gTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATg                                                     >  1:3678906/1‑93 (MQ=255)

              gTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATg                                                     <  1:4254638/93‑1 (MQ=255)

              gTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATg                                                     >  2:4351943/1‑93 (MQ=255)

               ttGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATgg                                                    >  1:3123838/1‑93 (MQ=255)

               ttGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATgg                                                    <  2:4210947/93‑1 (MQ=255)

                tGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCGTGGCCTGATCATggg                                                   >  2:6688529/1‑93 (MQ=255)

                 ggATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGt                                                  >  2:4426723/1‑93 (MQ=255)

                  gATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGtt                                                 >  1:1143621/1‑93 (MQ=255)

                  gATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGtt                                                 >  1:4639337/1‑93 (MQ=255)

                  gATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGtt                                                 <  2:3486401/93‑1 (MQ=255)

                    ttAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGtttt                                               <  2:3804815/93‑1 (MQ=255)

                    ttAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGtttt                                               >  1:1717758/1‑93 (MQ=255)

                     tAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTg                                              <  1:604808/93‑1 (MQ=255)

                     tAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTg                                              <  1:7411959/93‑1 (MQ=255)

                     tAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTg                                              <  1:7116069/93‑1 (MQ=255)

                     tAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTg                                              >  2:722735/1‑93 (MQ=255)

                      aaTGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTgg                                             <  2:3513400/93‑1 (MQ=255)

                         gCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGgcgc                                          >  1:7706032/1‑93 (MQ=255)

                         gCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGgcgc                                          >  2:5794939/1‑93 (MQ=255)

                         gCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGgcgc                                          >  1:667596/1‑93 (MQ=255)

                         gCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGgcgc                                          >  1:629538/1‑93 (MQ=255)

                           aaGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCaa                                        >  2:4079687/1‑93 (MQ=255)

                            aGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAAt                                       >  1:2544043/1‑93 (MQ=255)

                            aGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAAt                                       >  2:3593030/1‑93 (MQ=255)

                            aGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAAt                                       <  2:5257660/93‑1 (MQ=255)

                             ggAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATg                                      <  1:1527537/93‑1 (MQ=255)

                              gAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGc                                     <  2:90407/93‑1 (MQ=255)

                              gAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGc                                     >  2:7577950/1‑93 (MQ=255)

                                 tGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTgg                                  >  2:1114143/1‑93 (MQ=255)

                                   ccGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGc                                <  1:2464587/93‑1 (MQ=255)

                                   ccGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGc                                <  2:3302234/93‑1 (MQ=255)

                                   ccGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGc                                <  2:2261104/93‑1 (MQ=255)

                                    cGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCa                               <  2:1555664/93‑1 (MQ=255)

                                       tGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCaaaa                            <  1:1015478/93‑1 (MQ=255)

                                       tGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCaaaa                            <  2:7063514/93‑1 (MQ=255)

                                       tGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCaaaa                            >  1:65776/1‑93 (MQ=255)

                                       tGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCaaaa                            <  2:2201307/93‑1 (MQ=255)

                                       tGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCaaaa                            >  2:2484842/1‑93 (MQ=255)

                                        ggATAAAGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAAt                           <  1:789465/93‑1 (MQ=255)

                                        ggATAAAGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAAt                           <  2:4819100/93‑1 (MQ=255)

                                         gATAAAGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATg                          >  2:13946/1‑93 (MQ=255)

                                          aTAAAGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGGTTTGGCGCAATGCTGGGCAAAATGc                         >  1:3845078/1‑93 (MQ=255)

                                           tAAAGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCt                        <  2:7544593/93‑1 (MQ=255)

                                            aaaGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTg                       <  1:199391/93‑1 (MQ=255)

                                            aaaGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTg                       >  1:5082770/1‑93 (MQ=255)

                                            aaaGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTg                       <  1:6765874/93‑1 (MQ=255)

                                             aaGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTgg                      <  1:4371338/93‑1 (MQ=255)

                                              aGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGc                     >  1:2021083/1‑93 (MQ=255)

                                              aGTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGc                     <  2:602605/93‑1 (MQ=255)

                                               gTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCa                    <  1:6201613/93‑1 (MQ=255)

                                               gTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCa                    >  1:158124/1‑93 (MQ=255)

                                               gTTATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCa                    <  1:3193474/93‑1 (MQ=255)

                                                 tATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGa                  <  1:2060091/93‑1 (MQ=255)

                                                 tATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGa                  >  1:3348103/1‑93 (MQ=255)

                                                 tATTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGa                  >  2:4315813/1‑93 (MQ=255)

                                                  tttGGCTCCATCAAAGCGGGTGTCGGGG‑GGAAGCTCGGTAGCCTTGCACTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGAc                 <  2:1658131/92‑1 (MQ=255)

                                                  aTTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGAc                 <  2:7764035/93‑1 (MQ=255)

                                                  aTTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGAc                 <  1:6094523/93‑1 (MQ=255)

                                                  aTTGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGAc                 >  1:4493761/1‑93 (MQ=255)

                                                   ttGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACt                <  1:5650092/93‑1 (MQ=255)

                                                   ttGGCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACt                <  1:3973111/93‑1 (MQ=255)

                                                      gCTCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACTGCg             <  1:6394992/93‑1 (MQ=255)

                                                        tCCATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACTGCGGt           <  2:5238612/93‑1 (MQ=255)

                                                         ccATCAAAGCTGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCCAAATGCTGGCAGACTGCGGTg          >  2:5592370/1‑93 (MQ=255)

                                                         ccATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACTGCGGTg          <  1:4387910/93‑1 (MQ=255)

                                                         ccATCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACTGCGGTg          >  2:505862/1‑93 (MQ=255)

                                                           aTCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACTGCGGTGgc        >  2:2810531/1‑93 (MQ=255)

                                                           aTCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACTGCGGTGgc        <  1:1806524/93‑1 (MQ=255)

                                                           aTCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACTGCGGTGgc        <  2:6488856/93‑1 (MQ=255)

                                                            tCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACTGCGGTGgcg       >  1:5371804/1‑93 (MQ=255)

                                                            tCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACTGCGGTGgcg       >  1:5581329/1‑93 (MQ=255)

                                                            tCAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACTGCGGTGgcg       >  1:1190906/1‑93 (MQ=255)

                                                             cAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACTGCGGTGgcgc      >  1:5682308/1‑93 (MQ=255)

                                                             cAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACTGCGGTGgcgc      <  2:7813957/93‑1 (MQ=255)

                                                             cAAAGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACTGCGGTGgcgc      <  1:2869666/93‑1 (MQ=255)

                                                              aaaGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACTGCGGTGGCGca     <  2:7360226/93‑1 (MQ=255)

                                                               aaGCCGGTGTCG‑GCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACTGCGGTGGCGcac    >  2:3991506/1‑93 (MQ=255)

TCGTGGCGCTTGCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTC‑‑GC‑GGACG‑TCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACTGCGGTGGCGCACAA  >  NC_000913/3544283‑3544437

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`