BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,957,560	+C	intergenic (‑129/‑732)	ppiC ← / → rep	peptidyl‑prolyl cis‑trans isomerase C/rep helicase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,957,558	1	.	C	100.0%	972.2 / NA	303	intergenic (‑127/‑734)	ppiC/rep	peptidyl‑prolyl cis‑trans isomerase C/rep helicase
Reads supporting (aligned to +/- strand): ref base . (0/0); new base C (142/161); total (142/161)

Only 100 of 325 total aligned reads displayed.

AGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑C‑T‑GC‑‑TCGCAGGT‑CCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATG  >  NC_000913/3957471‑3957645

aGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGT‑ccc                                                                                      >  1:7779145/1‑92 (MQ=255)

 gCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGT‑ccct                                                                                     >  1:3780419/1‑91 (MQ=255)

     gATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAg                                                                                  >  2:5514374/1‑93 (MQ=255)

     gATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGACCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAg                                                                                  >  2:3786030/1‑93 (MQ=255)

      aTCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAgg                                                                                 <  2:5616166/93‑1 (MQ=255)

      aTCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAgg                                                                                 >  1:5738552/1‑93 (MQ=255)

       tCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAggg                                                                                >  1:3056632/1‑93 (MQ=255)

       tCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAggg                                                                                >  2:5975651/1‑93 (MQ=255)

         cGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGga                                                                              >  1:6675462/1‑93 (MQ=255)

             gATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGaaa                                                                          >  2:847809/1‑93 (MQ=255)

             gATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGaaa                                                                          >  2:2164556/1‑93 (MQ=255)

             gATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGaaa                                                                          >  2:3301149/1‑93 (MQ=255)

             gATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGGACATATATTGCAAAAGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGgaa                                                                          >  2:3236335/1‑93 (MQ=255)

              aTGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATTGCAAAAGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCCAGGGGAGaaaa                                                                         >  2:1888297/1‑93 (MQ=255)

              aTGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGaaaa                                                                         <  2:4461026/93‑1 (MQ=255)

              aTGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑C‑GGGCT‑TCGCAGGTCCCTCAAGGGGAGaaaa                                                                         <  2:1181422/93‑1 (MQ=255)

              aTGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑C‑GGGCT‑TCGCAGGTCCCTCAAGGGGAGaaaa                                                                         <  1:5022228/93‑1 (MQ=255)

               tGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGAAAAc                                                                        <  1:2988265/93‑1 (MQ=255)

               tGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGAAAAc                                                                        >  1:5541527/1‑93 (MQ=255)

                gCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGAAAACt                                                                       >  1:4734322/1‑93 (MQ=255)

                 cTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATTGCAAAAGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGAAAACtt                                                                      >  2:5280072/1‑93 (MQ=255)

                 cTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGAAAACtt                                                                      <  2:6397098/93‑1 (MQ=255)

                 cTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGAAAACtt                                                                      >  1:1016958/1‑93 (MQ=255)

                  tAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGAAAACTTa                                                                     >  1:3986758/1‑93 (MQ=255)

                  tAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGAAAACTTa                                                                     >  1:2291734/1‑93 (MQ=255)

                  tAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGAAAACTTa                                                                     >  1:6304532/1‑93 (MQ=255)

                   aaCGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAg                                                                    <  1:1727381/93‑1 (MQ=255)

                   aaCGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAg                                                                    >  2:3389149/1‑93 (MQ=255)

                   aaCGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAg                                                                    <  2:6156502/93‑1 (MQ=255)

                     cGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGAAAAATTAggg                                                                  >  2:3024452/1‑93 (MQ=255)

                      gTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGc                                                                 <  2:6752282/93‑1 (MQ=255)

                       tAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGcc                                                                >  2:2045793/1‑93 (MQ=255)

                       tAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGcc                                                                <  1:823182/93‑1 (MQ=255)

                       tAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGcc                                                                >  1:1364343/1‑93 (MQ=255)

                        aaTTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCct                                                               >  1:4623059/1‑93 (MQ=255)

                        aaTTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCct                                                               >  1:5115053/1‑93 (MQ=255)

                         aTTGTCAGGCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCctc                                                              <  1:5174879/93‑1 (MQ=255)

                            gtcagtcaGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTAt                                                           <  2:467456/93‑1 (MQ=255)

                             tcagtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATg                                                          >  1:1172747/1‑93 (MQ=255)

                             tcagtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATg                                                          <  2:4414582/93‑1 (MQ=255)

                              cagtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATgg                                                         <  2:6546405/93‑1 (MQ=255)

                                  cagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTa                                                     <  2:7535113/93‑1 (MQ=255)

                                     ggAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACaa                                                  <  1:7429987/93‑1 (MQ=255)

                                      gAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACaaa                                                 <  2:2873017/93‑1 (MQ=255)

                                       aGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAg                                                <  2:2811533/93‑1 (MQ=255)

                                         tGGCTGGTACATATATGGCAACAGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTc                                              <  2:2330600/93‑1 (MQ=255)

                                         tGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑C‑GGGCT‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTc                                              >  2:111768/1‑93 (MQ=255)

                                           gCTGGTACATATATGGTAAAAGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCAt                                            <  2:5179412/93‑1 (MQ=255)

                                           gCTGGTACATATATGGCAAAAGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCAt                                            <  2:5697526/93‑1 (MQ=255)

                                           gCTGGTACATATATGGCAAAAGCCCGAAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCAt                                            <  1:3129130/93‑1 (MQ=255)

                                            cTGGTACATATATGGCAAAAGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCAtt                                           <  1:448682/93‑1 (MQ=255)

                                            cTGGTACATATATGGCAAAAGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCAtt                                           <  1:4108286/93‑1 (MQ=255)

                                            cTGGTACATATATGGCAAAAGCCCGGAAAATC‑C‑G‑GCCTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCAtt                                           <  1:6959356/93‑1 (MQ=255)

                                             tGGTACATATATGGCAAAAGCCCGGGAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTa                                          <  2:5135937/93‑1 (MQ=255)

                                             tGGTACATATATGGCAAAAGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTa                                          <  1:2877595/93‑1 (MQ=255)

                                             tGGTACATATATGGCAAAAGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTa                                          <  1:1609627/93‑1 (MQ=255)

                                             tGGTACATATATGGCAAAAGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTa                                          <  1:2390388/93‑1 (MQ=255)

                                             tGGTACATATATGGCAAAAGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTa                                          <  2:4038947/93‑1 (MQ=255)

                                             tGGTACATATATGGCAAAAGCCCGGAAAATC‑C‑GGGCT‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTa                                          >  2:745500/1‑93 (MQ=255)

                                              ggTACATATATGGCAAAAGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAt                                         <  1:1214886/93‑1 (MQ=255)

                                              ggTACATATATGGCAAAAGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAt                                         <  1:6947204/93‑1 (MQ=255)

                                               gTACATATATGGCAAAAGCCCGGAAAATC‑C‑GGGCT‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATc                                        >  2:6484374/1‑93 (MQ=255)

                                                tACATATATGGCAAAAGCCCGGAAACTC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCg                                       <  1:1530851/93‑1 (MQ=255)

                                                tACATATATGGCAAAAGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCg                                       <  2:6243400/93‑1 (MQ=255)

                                                 aCATATATGGCAAAAGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCgg                                      <  2:1015980/93‑1 (MQ=255)

                                                  cATATATGGCAAAAGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCggg                                     <  2:1493795/93‑1 (MQ=255)

                                                  cATATATGGCAAAAGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCggg                                     <  1:6377959/93‑1 (MQ=255)

                                                  cATATATGGCAAAAGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCggg                                     >  1:7687587/1‑93 (MQ=255)

                                                   atatatGGCAAAAGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCgggg                                    >  2:2496527/1‑93 (MQ=255)

                                                   atatatGAAAAAAGCCGGGAAAATCGG‑G‑GCT‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCgggg                                    <  2:2904237/93‑1 (MQ=255)

                                                    tatatGGCAGAAGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGCGAAAAATTAGGGCCTCTCTGGGCTACAAAGTCATTATCGGGGa                                   <  2:7030050/93‑1 (MQ=255)

                                                    tatatGGCAAAAGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGa                                   <  2:332520/93‑1 (MQ=255)

                                                    tatatGGCAAAAGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGa                                   <  2:7145380/93‑1 (MQ=255)

                                                    tatatGGCAAAAGCCCGGAAAATC‑C‑GGGCT‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGa                                   >  1:6134041/1‑93 (MQ=255)

                                                     atatGGCAAAAGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGAt                                  <  2:1657477/93‑1 (MQ=255)

                                                     atatGGCAAAAGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGAt                                  >  1:113035/1‑93 (MQ=255)

                                                       atGGCAAAAGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATgg                                <  1:5324926/93‑1 (MQ=255)

                                                        tGGCAAAAGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGt                               >  2:7609268/1‑93 (MQ=255)

                                                          gCAAAAGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGtta                             >  2:4933352/1‑93 (MQ=255)

                                                            aaaaGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttatt                           >  1:7402266/1‑93 (MQ=255)

                                                             aaaGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGTCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattt                          >  1:3920899/1‑93 (MQ=255)

                                                             aaaGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattt                          <  2:2265453/93‑1 (MQ=255)

                                                             aaaGCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattt                          >  2:3104555/1‑93 (MQ=255)

                                                               aGCCCGGAAAAAC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttatttta                        <  2:4892842/93‑1 (MQ=255)

                                                                gCCCGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattttat                       >  2:691460/1‑93 (MQ=255)

                                                                gCCCGGAAAATC‑C‑GGGCT‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattttat                       >  1:5925210/1‑93 (MQ=255)

                                                                 cccGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattttatt                      <  2:7004594/93‑1 (MQ=255)

                                                                  ccGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTg                     <  2:2670672/93‑1 (MQ=255)

                                                                  ccGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTg                     >  1:2567450/1‑93 (MQ=255)

                                                                  ccGGAAAATC‑CGG‑GCT‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTg                     <  2:7837778/93‑1 (MQ=255)

                                                                                 ggcttCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAg         <  1:4384228/89‑1 (MQ=255)

                                                                                  gcttCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGc        <  2:414864/90‑1 (MQ=255)

                                                                                   cttCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCg       <  1:2223550/91‑1 (MQ=255)

                                                                                    ttCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGa      <  1:7310165/92‑1 (MQ=255)

                                                                                    ttCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGa      >  2:5384531/2‑93 (MQ=255)

                                                                                      cGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGata    <  1:6413956/93‑1 (MQ=255)

                                                                                       gCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGatat   <  2:4100698/93‑1 (MQ=255)

                                                                                        cAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATg  >  1:7170006/1‑93 (MQ=255)

                                                                                        cAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATg  >  2:1002374/1‑93 (MQ=255)

                                                                                        cAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATg  >  2:2471474/1‑93 (MQ=255)

AGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑C‑T‑GC‑‑TCGCAGGT‑CCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATG  >  NC_000913/3957471‑3957645

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`