BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,008,411	+C	coding (494/516 nt)	b4555 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,008,410	1	.	C	100.0%	385.0 / NA	121	A165P (GCT→CCT)	b4555	hypothetical protein
Reads supporting (aligned to +/- strand): ref base . (0/0); new base C (47/74); total (47/74)

Only 100 of 124 total aligned reads displayed.

TCTGGAAGTGATGGCGGGCGGCGTTTC‑AAAGGCCATGCGCTGGAAG‑GCTGGC‑‑‑G‑‑‑‑AAC‑T‑GGCTACAG‑CTGAAGGATT‑G‑ATTGC‑GT‑T‑‑GTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGAAA‑GCTGCATTATGGGCAGTGGC  >  NC_000913/4008346‑4008492

gcTGGAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑Gt‑t                                                                     <  1:2469917/92‑1 (MQ=255)

 cTGGAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑Gt‑tt                                                                    <  2:5755912/93‑2 (MQ=255)

 cTGGAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑Gt‑tt                                                                    <  1:6824227/93‑2 (MQ=255)

 cTGGAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑Gt‑tt                                                                    <  1:1059237/93‑2 (MQ=255)

  tGGAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑Gt‑ttg                                                                   <  1:6350927/93‑3 (MQ=255)

   ggAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑Gt‑ttgg                                                                  <  1:1061422/93‑4 (MQ=255)

   ggAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑Gt‑ttgg                                                                  <  1:176140/93‑4 (MQ=255)

   ggAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑Gt‑ttgg                                                                  >  2:137114/1‑90 (MQ=255)

   ggAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑Gt‑ttgg                                                                  <  1:251791/93‑4 (MQ=255)

    gAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑Gt‑ttggg                                                                 >  2:5683019/1‑89 (MQ=255)

          aTGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACggg                                                           >  2:502144/1‑93 (MQ=255)

          aTGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACggg                                                           <  2:3772951/93‑1 (MQ=255)

          aTGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACggg                                                           >  2:3179687/1‑93 (MQ=255)

           tGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGa                                                          <  1:2285960/93‑1 (MQ=255)

           tGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGa                                                          <  1:3177291/93‑1 (MQ=255)

            ggcgggcgGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGAt                                                         <  2:4703577/93‑1 (MQ=255)

             gcgggcggGGTTTCAAAACGCCATGCGCTGGAAGCGGTGGCTAAGA‑‑‑AAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATg                                                        <  2:2141291/93‑1 (MQ=255)

              cgggcggCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGa                                                       <  1:2852182/93‑1 (MQ=255)

               gggcggCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGaa                                                      <  1:6162743/93‑1 (MQ=255)

               gggcggCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGaa                                                      <  1:297305/93‑1 (MQ=255)

               gggcggCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGaa                                                      <  2:4150200/93‑1 (MQ=255)

                ggcggcGTTTCAAAAGGCCATGCGGTGGAAGCGGTGGC‑‑‑GAAGAAACGG‑GGCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAac                                                     <  1:7078414/93‑1 (MQ=255)

                ggcggcGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAac                                                     <  1:2454381/93‑1 (MQ=255)

                ggcggcGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAac                                                     <  1:7078413/93‑1 (MQ=255)

                ggcggcGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAac                                                     >  1:2114222/1‑93 (MQ=255)

                ggcggcGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAac                                                     <  2:5450451/93‑1 (MQ=255)

                ggcggcGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGAGGAac                                                     >  2:2476240/1‑93 (MQ=255)

                 gcggcgTTTCAAAAGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAacg                                                    >  2:2387781/1‑93 (MQ=255)

                 gcggcgTTTCAAAAGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAacg                                                    <  2:7488011/93‑1 (MQ=255)

                  cggcgTTTCAAAAGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAacga                                                   >  1:4484584/1‑93 (MQ=255)

                  cggcgTTTCAAAAGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAacga                                                   <  1:3005645/93‑1 (MQ=255)

                  cggcgTTTCAAAAGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAacga                                                   <  1:4611868/93‑1 (MQ=255)

                   ggcgTTTCAAAAGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAacgac                                                  <  1:6985594/93‑1 (MQ=255)

                   ggcgTTTCAAAAGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAacgac                                                  >  1:4823526/1‑93 (MQ=255)

                    gcgTTTCAAAAGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAacgacg                                                 >  1:3319815/1‑93 (MQ=255)

                    gcgTTTCAAAAGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAacgacc                                                 >  1:5719364/1‑92 (MQ=255)

                     cgTTTCAAAAGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAACGACGc                                                <  2:5618425/93‑1 (MQ=255)

                     cgTTTCAAAAGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAACGACGc                                                <  1:3574992/93‑1 (MQ=255)

                      gTTTCAAAAGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAACGACGcg                                               >  1:1056564/1‑92 (MQ=255)

                      gTTTCAAAAGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAACGACGcc                                               <  2:6601284/93‑1 (MQ=255)

                      gTTTCAAAAGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAACGACGcc                                               >  1:2358208/1‑93 (MQ=255)

                      gTTTCAAAAGGCCATGCGCTGGAAGCGGCGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAACGACGcg                                               >  2:5160899/1‑92 (MQ=255)

                        ttcaaaaGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAACGACGCCGa                                             <  1:2136365/89‑1 (MQ=255)

                        ttcaaaaGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAACGACGCCGa                                             <  2:4918077/89‑1 (MQ=255)

                         tcaaaaGGCCATGCGCTGGAAGTGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAACGACGCCGaa                                            >  1:1052812/4‑93 (MQ=255)

                         tcaaaaGGCCATGCGCTGGAAGTGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAACGACGCCGaa                                            >  1:4635586/4‑93 (MQ=255)

                         tcaaaaGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAACGACGCCGaa                                            >  2:1515050/4‑93 (MQ=255)

                         tcaaaaGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAACGACGCCGaa                                            <  2:6658377/90‑1 (MQ=255)

                          caaaaGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAACGACGCCGaaa                                           <  1:4433613/91‑1 (MQ=255)

                          caaaaGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAACGACGCCGaaa                                           <  1:5401855/91‑1 (MQ=255)

                          caaaaGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAACGACGCCGaaa                                           <  2:1777780/91‑1 (MQ=255)

                          caaaaGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAACGACGCCGaaa                                           <  2:1472139/91‑1 (MQ=255)

                          caaaaGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAACGACGCCGaaa                                           <  1:5041729/91‑1 (MQ=255)

                          caaaaGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAACGACGCCGaaa                                           <  1:4920707/91‑1 (MQ=255)

                          caaaaGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAACGACGCCGaaa                                           <  2:6859924/91‑1 (MQ=255)

                          caaaaGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAACGACGCCGaaa                                           <  1:7277919/91‑1 (MQ=255)

                          caaaaGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAACGACGCCGaaa                                           >  1:3649935/3‑93 (MQ=255)

                          caaaaGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAACGACGCCGaaa                                           <  2:7352998/91‑1 (MQ=255)

                           aaaaGGCCATGCGCTGGAAGCGGTTGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAACGACGCCGAAAt                                          <  1:975371/92‑1 (MQ=255)

                           aaaaGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAACGACGCCGAAAt                                          <  1:5409834/92‑1 (MQ=255)

                           aaaaGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAACGACGCCGAAAt                                          >  2:4664414/2‑93 (MQ=255)

                           aaaaGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAAAGACGCCGAAAt                                          >  2:3481560/2‑93 (MQ=255)

                            aaaGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAACGACGCCGAAATg                                         >  1:7112816/1‑93 (MQ=255)

                            aaaGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAACGACGCCGAAATg                                         >  1:6421733/1‑93 (MQ=255)

                            aaaGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAACGACGCCGAAATg                                         <  1:6346996/93‑1 (MQ=255)

                            aaaGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAACGACGCCGAAATg                                         >  2:3147096/1‑93 (MQ=255)

                             aaGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAACGACGCCGAAATGc                                        >  2:7165808/1‑93 (MQ=255)

                              aGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATTGG‑ATTGA‑GT‑TTGGGGACGGGATGAACGACGCCGAAGTGCt                                       >  1:6774615/1‑93 (MQ=255)

                              aGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAACGACGCCGAAATGCt                                       <  1:48196/93‑1 (MQ=255)

                              aGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAACGACGCCGAAATGCt                                       >  2:4224177/1‑93 (MQ=255)

                              aGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAACGACGCCGAAATGCt                                       >  2:3129636/1‑93 (MQ=255)

                               ggCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAACGACGCCGAAATGCTg                                      <  1:642075/93‑1 (MQ=255)

                               ggCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAACGACGCCGAAATGCTg                                      <  1:6027781/93‑1 (MQ=255)

                               ggCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAAC‑TGGGCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAACGACGCCGAAATGCTg                                      <  1:2850945/93‑1 (MQ=255)

                                                                actgggCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGGAAAGGCTGCATTATggg         <  1:7466089/89‑1 (MQ=255)

                                                                actgggCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGGAAAGGCTGCATTATggg         >  2:5384635/5‑93 (MQ=255)

                                                                actgggCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGGAAAGGCTGCATTATggg         <  2:2080788/89‑1 (MQ=255)

                                                                 ctgggCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGGAAAGGCTGCATTATGGGc        >  1:6921214/4‑93 (MQ=255)

                                                                 ctgggCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGGAAAGGCTGCATTATGGGc        >  2:5769600/4‑93 (MQ=255)

                                                                 ctgggCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGGAAAGGCTGCATTATGGGc        <  1:2162945/90‑1 (MQ=255)

                                                                  tgggCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGGAAAGGCTGCATTATGGGCa       <  1:5519867/91‑1 (MQ=255)

                                                                  tgggCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGGAAAGGCTGCATTATGGGCa       <  1:586342/91‑1 (MQ=255)

                                                                   gggCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGGAAAGGCTGCATTATGGGCAg      <  1:7682114/92‑1 (MQ=255)

                                                                   gggCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGGAAAGGCTGCATTATGGGCAg      >  1:7897695/2‑93 (MQ=255)

                                                                   gggCTACAGACTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGGAAAGGCTGCATTATGGGCAg      <  2:7485157/92‑1 (MQ=255)

                                                                    ggCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAATGACGCCGAAATGCTGTCGATGGCGGGGAAAGGCTGCATTATGGGCAGt     >  1:1933297/1‑93 (MQ=255)

                                                                    ggCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGGAAAGGCTGCATTATGGGCAgg     >  1:1819517/1‑92 (MQ=255)

                                                                    ggCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGGAAAGGCTGCATTATGGGCAGt     <  1:2052038/93‑1 (MQ=255)

                                                                    ggCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGGAAAGGCTGCATTATGGGCAGt     <  1:3841203/93‑1 (MQ=255)

                                                                    ggCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGGAAAGGCTGCATTATGGGCAGt     <  2:2543954/93‑1 (MQ=255)

                                                                    ggCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGGAAAGGCTGCATTATGGGCAGt     <  2:3153759/93‑1 (MQ=255)

                                                                    ggCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGGAAAGGCTGCATTATGGGCAGt     <  2:6848910/93‑1 (MQ=255)

                                                                    ggCTACAGCCTGAAGGATT‑GTAGTGC‑GT‑TTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGGAAAGGCTGCATTATGGGCAGt     <  2:2597142/93‑1 (MQ=255)

                                                                    ggCTACAGACTGAAGGATT‑GTATTGC‑GTGTG‑GTGACAGGATGAACGACGCCGAAATGCTGTCGATGGCGGGGAAATGCTGCATTATGGGCatt     <  2:1049537/93‑3 (MQ=255)

                                                                     gCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGGAAAGGCTGCATTATGGGCAGTg    >  2:3818167/1‑93 (MQ=255)

                                                                     gCTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGGAAAGGCTGCATTATGGGCAGTg    <  2:5154834/93‑1 (MQ=255)

                                                                      cTACAGCCTGAAGGATT‑GTATTGCGGT‑TG‑GTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGGAAAGGCTCTATTATGTGCAGTgc   >  1:140088/1‑92 (MQ=255)

                                                                      cTACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGGAAAGGCTGCATTATGGGCAGTgc   <  1:5359642/93‑2 (MQ=255)

                                                                       tACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGGAAAGGCTGCATTATGGGCAGTgcc  >  2:2186156/1‑91 (MQ=255)

                                                                       tACAGCCTGAAGGATT‑GTATTGC‑GT‑TTGGGGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGGAAAGGCTGCGTTATGGGCAGTgcg  >  2:2477351/1‑91 (MQ=255)

TCTGGAAGTGATGGCGGGCGGCGTTTC‑AAAGGCCATGCGCTGGAAG‑GCTGGC‑‑‑G‑‑‑‑AAC‑T‑GGCTACAG‑CTGAAGGATT‑G‑ATTGC‑GT‑T‑‑GTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGAAA‑GCTGCATTATGGGCAGTGGC  >  NC_000913/4008346‑4008492

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`