BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,008,421	+T	coding (504/516 nt)	b4555 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,008,421	1	.	T	99.4%	562.9 / NA	160	L168F (TTG→TTT)	b4555	hypothetical protein
Reads supporting (aligned to +/- strand): ref base . (0/0); major base T (72/87); minor base A (0/1); total (72/88)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 162 total aligned reads displayed.

TCTGGAAGTGATGGCGGGCGGCGTTTC‑AAAGGCCATGCGCTGGAAG‑GCTGGC‑‑‑G‑‑‑‑AACT‑GG‑CTACAG‑CTGAAGGATT‑G‑ATTGCGTT‑‑GTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GG‑G‑‑AAA‑GCTGCATTATGGGCAGTGGCCACCAGCGTCT  >  NC_000913/4008346‑4008503

gcTGGAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAACTGGG‑CTACAGCCTGAAGGATT‑GTATTGCGtt                                                                                   <  1:2469917/92‑1 (MQ=255)

  tGGAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAACTGGG‑CTACAGCCTGAAGGATT‑GTATTGCGtttg                                                                                 <  1:6350927/93‑3 (MQ=255)

  tGGAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAACTGGG‑CTACAGCCTGAAGGATT‑GTATTGCGtttg                                                                                 <  2:5036371/93‑3 (MQ=255)

   ggAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAACTGGG‑CTACAGCCTGAAGGATT‑GTATTGCGtttgg                                                                                >  2:1261370/1‑90 (MQ=255)

   ggAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAACTGGG‑CTACAGCCTGAAGGATT‑GTATTGCGtttgg                                                                                <  1:1061422/93‑4 (MQ=255)

    gAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAACTGGG‑CTACAGCCTGAAGGATT‑GTATTGCGtttggg                                                                               >  2:5683019/1‑89 (MQ=255)

          aTGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAACTGGG‑CTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACggg                                                                         >  2:3179687/1‑93 (MQ=255)

           tGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAACTGGG‑CTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGa                                                                        <  2:4595843/93‑1 (MQ=255)

           tGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAACTGGG‑CTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGa                                                                        <  1:3177291/93‑1 (MQ=255)

           tGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAACTGGG‑CTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGa                                                                        <  1:2285960/93‑1 (MQ=255)

           tGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAACTGGG‑CTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGa                                                                        <  1:7051633/93‑1 (MQ=255)

            ggcgggcgGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAACTGGG‑CTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGAt                                                                       <  2:5824838/93‑1 (MQ=255)

            ggcgggcgGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAACTGGG‑CTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGAt                                                                       <  2:4703577/93‑1 (MQ=255)

             gcgggcggGGTTTCAAAACGCCATGCGCTGGAAGCGGTGGCTAAGA‑‑‑AACTGGG‑CTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATg                                                                      <  2:2141291/93‑1 (MQ=255)

              cgggcggCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAACTGGG‑CTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGa                                                                     <  1:2852182/93‑1 (MQ=255)

               gggcggCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAACTGGG‑CTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGaa                                                                    <  1:6162743/93‑1 (MQ=255)

               gggcggCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAACTGGG‑CTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGaa                                                                    >  1:7618833/1‑93 (MQ=255)

                ggcggcGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAACTGGG‑CTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAac                                                                   >  1:2114222/1‑93 (MQ=255)

                ggcggcGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAACTGGG‑CTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAac                                                                   <  1:7078413/93‑1 (MQ=255)

                 gcggcgTTTCAAAAGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAACTGGG‑CTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAacg                                                                  <  2:7488011/93‑1 (MQ=255)

                 gcggcgTTTCAAAAGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAACTGGG‑CTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAacg                                                                  >  2:2387781/1‑93 (MQ=255)

                  cggcgTTTCAAAAGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAACTGGG‑CTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAacga                                                                 <  1:3005645/93‑1 (MQ=255)

                  cggcgTTTCAAAAGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAACTGGG‑CTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAacga                                                                 <  2:184452/93‑1 (MQ=255)

                  cggcgTTTCAAAAGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAACTGGG‑CTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAacga                                                                 <  1:1673796/93‑1 (MQ=255)

                   ggcgTTTCAAAAGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAACTGGG‑CTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAacgac                                                                >  1:4823526/1‑93 (MQ=255)

                     cgTTTCAAAAGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAACTGGG‑CTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGc                                                              <  1:3574992/93‑1 (MQ=255)

                      gTTTCAAAAGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAACTGGG‑CTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGcg                                                             >  1:1056564/1‑92 (MQ=255)

                      gTTTCAAAAGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAACTGGG‑CTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGcc                                                             >  1:2358208/1‑93 (MQ=255)

                      gTTTCAAAAGGCCATGCGCTGGAAGCGGCGGC‑‑‑GAAGAAACTGGG‑CTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGcg                                                             >  2:5160899/1‑92 (MQ=255)

                        ttcaaaaGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAACTGGG‑CTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGa                                                           <  2:4918077/89‑1 (MQ=255)

                         tcaaaaGGCCATGCGCTGGAAGTGGTGGC‑‑‑GAAGAAACTGGG‑CTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGaa                                                          >  1:1052812/4‑93 (MQ=255)

                         tcaaaaGGCCATGCGCTGGAAGTGGTGGC‑‑‑GAAGAAACTGGG‑CTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGaa                                                          >  1:4635586/4‑93 (MQ=255)

                         tcaaaaGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAACTGGG‑CTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGaa                                                          <  2:6658377/90‑1 (MQ=255)

                          caaaaGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAACTGGG‑CTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGaaa                                                         <  1:5041729/91‑1 (MQ=255)

                          caaaaGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAACTGGG‑CTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGaaa                                                         <  1:4433613/91‑1 (MQ=255)

                          caaaaGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAACTGGG‑CTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGaaa                                                         <  1:5401855/91‑1 (MQ=255)

                          caaaaGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAACTGGG‑CTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGaaa                                                         >  1:553209/3‑93 (MQ=255)

                          caaaaGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAACTGGG‑CTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGaaa                                                         <  2:1777780/91‑1 (MQ=255)

                          caaaaGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAACTGGG‑CTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGaaa                                                         <  2:1472139/91‑1 (MQ=255)

                          caaaaGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAACTGGG‑CTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGaaa                                                         <  1:7277919/91‑1 (MQ=255)

                           aaaaGGCCATGCGCTGGAAGCGGTTGC‑‑‑GAAGAAACTGGG‑CTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAAt                                                        <  1:975371/92‑1 (MQ=255)

                           aaaaGGCCATGCGCTGGAAGCGGTGGC‑‑‑GGAGAAACTGGG‑CTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACCACGCCGAAAt                                                        >  2:6936036/2‑93 (MQ=255)

                           aaaaGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAACTGGG‑CTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAAAGACGCCGAAAt                                                        >  2:3481560/2‑93 (MQ=255)

                            aaaGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAACTGGG‑CTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGCCGCCGAAATg                                                       >  2:2449115/1‑93 (MQ=255)

                            aaaGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAACTGGG‑CTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATg                                                       >  1:7112816/1‑93 (MQ=255)

                            aaaGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAACTGGG‑CTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATg                                                       >  1:6421733/1‑93 (MQ=255)

                             aaGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAACTGGG‑CTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGc                                                      >  2:7165808/1‑93 (MQ=255)

                              aGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAACTGGG‑CTACAGCCTGAAGGATTGG‑ATTGAGTTTGGGGACGGGATGAACGACGCCGAAGTGCt                                                     >  1:6774615/1‑93 (MQ=255)

                              aGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAACTGGG‑CTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCt                                                     >  2:4224177/1‑93 (MQ=255)

                              aGGCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAACTGGG‑CTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCt                                                     >  2:3129636/1‑93 (MQ=255)

                               ggCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAACTGGG‑CTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTg                                                    <  1:2850945/93‑1 (MQ=255)

                               ggCCATGCGCTGGAAGCGGTGGC‑‑‑GAAGAAACTGGG‑CTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTg                                                    <  1:4692973/93‑1 (MQ=255)

                                                           acaaaCT‑GGTCTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTa                        <  2:5612232/90‑1 (MQ=255)

                                                               actggg‑CTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATggg                    >  2:5384635/5‑93 (MQ=255)

                                                                ctggg‑CTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGc                   >  1:6921214/4‑93 (MQ=255)

                                                                ctggg‑CTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGc                   <  1:2162945/90‑1 (MQ=255)

                                                                ctggg‑CTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGc                   >  2:5769600/4‑93 (MQ=255)

                                                                 tggg‑CTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGCa                  <  1:5519867/91‑1 (MQ=255)

                                                                 tggg‑CTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGCa                  <  1:586342/91‑1 (MQ=255)

                                                                 tggg‑CTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGCa                  <  1:6164983/91‑1 (MQ=255)

                                                                  ggg‑CTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGCAg                 >  1:2553413/2‑93 (MQ=255)

                                                                  ggg‑CTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGCAg                 >  1:7897695/2‑93 (MQ=255)

                                                                   gg‑CTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGCAgg                >  1:1819517/1‑92 (MQ=255)

                                                                   gg‑CTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGCAGt                <  2:6848910/93‑1 (MQ=255)

                                                                   gg‑CTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGCAGt                <  2:3153759/93‑1 (MQ=255)

                                                                   gg‑CTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGCAGt                <  1:2052038/93‑1 (MQ=255)

                                                                   gg‑CTACAGCCTGAAGGATT‑GTAGTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGCAGt                <  2:2597142/93‑1 (MQ=255)

                                                                    g‑CTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGCAGTg               >  2:3818167/1‑93 (MQ=255)

                                                                    g‑CTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGCAGTg               >  1:3746607/1‑93 (MQ=255)

                                                                       tACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGCAGTgcc             >  2:2186156/1‑91 (MQ=255)

                                                                       tACAGCCTGAAGGATT‑GTATTGCGTTTGGGGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCGTTATGGGCAGTgcg             >  2:2477351/1‑91 (MQ=255)

                                                                           gccTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGCAGTGCgcacc         >  2:1306646/3‑93 (MQ=255)

                                                                           gccTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGAG‑‑AAAGGCTGCATTATGGGTAGTGCgcacc         <  2:243921/91‑1 (MQ=255)

                                                                            ccTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGCAGTGCgcacca        <  2:3991763/92‑1 (MQ=255)

                                                                            catGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGCAGTGCgcacca        <  1:4499914/91‑1 (MQ=255)

                                                                             cTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAg       >  1:4048427/1‑93 (MQ=255)

                                                                             cTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAg       <  2:5615870/93‑1 (MQ=255)

                                                                             cTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAg       >  2:3472436/1‑93 (MQ=255)

                                                                             cTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAg       >  1:3818327/1‑93 (MQ=255)

                                                                             cTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAg       >  1:6403187/1‑93 (MQ=255)

                                                                              tGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGc      >  2:7740586/1‑93 (MQ=255)

                                                                              tGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGc      >  2:4367900/1‑93 (MQ=255)

                                                                              tGAAGGAGT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGc      <  1:5317749/93‑1 (MQ=255)

                                                                               gAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCg     >  1:1962070/1‑93 (MQ=255)

                                                                               gAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCg     >  1:1822924/1‑93 (MQ=255)

                                                                               gAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGGCGATGGC‑GG‑GGTACG‑GCTGCATTATGGGCAGTGCTCACCAGCg     >  2:2715251/1‑93 (MQ=255)

                                                                                aaGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGt    >  1:2740334/1‑93 (MQ=255)

                                                                                aaGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGt    <  2:6251007/93‑1 (MQ=255)

                                                                                 aGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTc   >  1:2522506/1‑93 (MQ=255)

                                                                                 aGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTc   <  1:3317964/93‑1 (MQ=255)

                                                                                 aGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTc   >  1:1125954/1‑93 (MQ=255)

                                                                                 aGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTc   <  1:5116906/93‑1 (MQ=255)

                                                                                 aGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTc   >  1:3747692/1‑93 (MQ=255)

                                                                                  ggATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCt  <  1:6808145/93‑1 (MQ=255)

                                                                                  ggATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCt  >  1:3548306/1‑93 (MQ=255)

                                                                                  ggATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCt  <  1:528945/93‑1 (MQ=255)

                                                                                  ggATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCt  >  2:7423877/1‑93 (MQ=255)

                                                                                  ggATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCt  >  2:3738233/1‑93 (MQ=255)

                                                                                  ggATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCt  >  2:7565456/1‑93 (MQ=255)

                                                                                  ggATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGCAGTGCGAACCAGCGTCt  >  1:2486928/1‑93 (MQ=255)

TCTGGAAGTGATGGCGGGCGGCGTTTC‑AAAGGCCATGCGCTGGAAG‑GCTGGC‑‑‑G‑‑‑‑AACT‑GG‑CTACAG‑CTGAAGGATT‑G‑ATTGCGTT‑‑GTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GG‑G‑‑AAA‑GCTGCATTATGGGCAGTGGCCACCAGCGTCT  >  NC_000913/4008346‑4008503

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`