| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,008,469 | +G | intergenic (+36/‑197) | b4555 → / → yigM | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,008,466 | 1 | . | G | 98.7% | 698.7 / 0.8 | 223 | intergenic (+33/‑200) | b4555/yigM | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base . (1/2); new base G (113/107); total (114/109) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.15e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
Only 100 of 226 total aligned reads displayed.
AACTGGCTACAG‑CTGAAGGATTG‑ATTGCGT‑T‑‑GTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑G‑GG‑‑AAA‑GCTGCATTATGGGCAGTGGCCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑GAAGTGATTGGTACTAATGCCGACGAC > NC_000913/4008399‑4008551 | actgggCTACAGCCTGAAGGATTGTATTGCGT‑TTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATggg > 2:5384635/5‑93 (MQ=255)actgggCTACAGCCTGAAGGATTGTATTGCGT‑TTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATggg < 1:7466089/89‑1 (MQ=255) ctgggCTACAGCCTGAAGGATTGTATTGCGT‑TTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGc > 1:6921214/4‑93 (MQ=255) tgggCTACAGCCTGAAGGATTGTATTGCGT‑TTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCa < 1:6164983/91‑1 (MQ=255) gggCTACAGCCTGAAGGATTGTATTGCGT‑TTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAg > 1:7897695/2‑93 (MQ=255) gggCTACAGCCTGAAGGATTGTATTGCGT‑TTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAg < 1:7682114/92‑1 (MQ=255) ggCTACAGCCTGAAGGATTGTATTGCGT‑TTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGt < 2:2543954/93‑1 (MQ=255) ggCTACAGCCTGAAGGATTGTATTGCGT‑TTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGt < 2:6848910/93‑1 (MQ=255) ggCTACAGCCTGAAGGATTGTAGTGCGT‑TTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGt < 2:2597142/93‑1 (MQ=255) ggCTACAGACTGAAGGATTGTATTGCGTGTG‑GTGACAGGATGAACGACGCCGAAATGCTGTCGATGGCGG‑GG‑‑AAATGCTGCATTATGGGCatt < 2:1049537/93‑3 (MQ=255) gCTACAGCCTGAAGGATTGTATTGCGT‑TTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTg > 2:3818167/1‑93 (MQ=255) gCTACAGCCTGAAGGATTGTATTGCGT‑TTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTg > 1:3746607/1‑93 (MQ=255) cTACAGCCTGAAGGATTGTATTGCGT‑TTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTgc < 1:5359642/93‑2 (MQ=255) tACAGCCTGAAGGATTGTATTGCGT‑TTGGGGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCGTTATGGGCAGTgcg > 2:2477351/1‑91 (MQ=255) gccTGAAGGATTGTATTGCGT‑TTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCgcacc > 2:1306646/3‑93 (MQ=255) ccTGAAGGATTGTATTGCGT‑TTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCgcacca < 2:3991763/92‑1 (MQ=255) cTGAAGGATTGTATTGCGT‑TTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAg < 2:5615870/93‑1 (MQ=255) cTGAAGGATTGTATTGCGT‑TTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAg > 2:3472436/1‑93 (MQ=255) cTGAAGGATTGTATTGCGT‑TTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAg > 1:4048427/1‑93 (MQ=255) cTGAAGGATTGTATTGCGT‑TTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCCCACCAg > 2:2163605/1‑93 (MQ=255) tGAAGGATTGTATTGCGT‑TTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGc > 2:3600033/1‑93 (MQ=255) tGAAGGATTGTATTGCGT‑TTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGc > 2:7608789/1‑93 (MQ=255) tGAAGGATTGTATTGCGT‑TTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGc > 2:7740586/1‑93 (MQ=255) tGAAGGATTGTATTGCGT‑TTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑G‑GGGCAAG‑GCTGCATTATGGGCAGTGCGCACCAGc > 2:4367903/1‑93 (MQ=255) tGAAGGAGTGTATTGCGT‑TTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGc < 1:5317749/93‑1 (MQ=255) gAAGGATTGTATTGCGT‑TTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCg > 1:1822924/1‑93 (MQ=255) gAAGGATTGTATTGCGT‑TTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCg > 1:1962070/1‑93 (MQ=255) aaGGATTGTATTGCGT‑TTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGt > 1:2740334/1‑93 (MQ=255) aGGATTGTATTGCGT‑TTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTc < 1:5116906/93‑1 (MQ=255) aGGATTGTATTGCGT‑TTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTc > 1:3747692/1‑93 (MQ=255) aGGATTGTATTGCGT‑TTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTc < 1:3317964/93‑1 (MQ=255) ggATTGTATTGCGT‑TTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCt < 1:528945/93‑1 (MQ=255) ggATTGTATTGCGT‑TTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCt < 1:6808145/93‑1 (MQ=255) ggATTGTATTGCGT‑TTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCt > 2:3738233/1‑93 (MQ=255) ggATTGTATTGCGT‑TTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGAACCAGCGTCt > 1:2486928/1‑93 (MQ=255) tttggtgACGGGATGAACGACGCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCAt > 1:3521706/5‑93 (MQ=255) ttggtgACGGGATGAACGACGCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATc < 2:2031600/90‑1 (MQ=255) ttggtgACGGGATGAACGACGCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATc > 2:6184843/4‑93 (MQ=255) tggtgACGGGATGAACGACGCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATcc > 2:6181357/3‑93 (MQ=255) ggtgACGGGATGAACGACGCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATccc < 1:864451/92‑1 (MQ=255) ggtgACGGGATGAACGACGCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATccc < 2:506894/92‑1 (MQ=255) tgACGGGATGAACGACGCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGa > 1:4812715/1‑93 (MQ=255) gACGGGATGAACGACGCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAg < 1:6093420/93‑1 (MQ=255) aCGGGATGAACGACGCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAgt > 1:1811200/1‑92 (MQ=255) aCGGGATGAACGACGCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGc < 2:5245164/93‑1 (MQ=255) aCGGGATGAACGACGCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGc < 1:4947648/93‑1 (MQ=255) cGGGATGAACGACGCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCt < 2:159736/93‑1 (MQ=255) cGGGATGAACGACGCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCt < 1:2117140/93‑1 (MQ=255) cGGGATGAACGACGCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCt < 1:7232807/93‑1 (MQ=255) cGGGATGAACGACGCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCt > 2:4503882/1‑93 (MQ=255) gggATGAACGACGCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑g > 1:5876092/1‑93 (MQ=255) gggATGAACGACGCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑g > 2:6469902/1‑93 (MQ=255) ggATGAACGACGCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑gg > 1:7534945/1‑92 (MQ=255) ggATGAACGACGCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑gg < 2:4383704/93‑2 (MQ=255) gATGAACGACGCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑gga < 1:7659939/93‑3 (MQ=255) gATGAACGACGCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑gga > 1:618750/1‑91 (MQ=255) gATGAACGACGCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑gga > 1:1429259/1‑91 (MQ=255) gATGAACGACGCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑gga > 2:5721524/1‑91 (MQ=255) aTGAACGACGCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑ggaa > 2:6032102/1‑90 (MQ=255) tGAACGACGCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑ggaag < 2:6595280/93‑5 (MQ=255) aaCGACGCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTg < 1:554284/93‑1 (MQ=255) aaCGACGCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTg > 1:10696/1‑93 (MQ=255) acgacgCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGa < 2:6265685/93‑1 (MQ=255) acgacgCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGa < 2:472804/93‑1 (MQ=255) acgacgCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGa < 2:7380003/93‑1 (MQ=255) cgacgCCGAAATGCTGTCGATGGC‑GTGG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGAt < 1:4664415/93‑1 (MQ=255) gacgCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGAtt < 2:6389512/93‑1 (MQ=255) gacgCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGAtt > 1:2626165/1‑93 (MQ=255) gacgCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGAtt < 1:2305281/93‑1 (MQ=255) acgCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTg > 2:4172934/1‑93 (MQ=255) acgCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTg < 1:5254770/93‑1 (MQ=255) cgCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTgg < 2:2382457/93‑1 (MQ=255) gCCGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGt > 1:5693879/1‑93 (MQ=255) ccGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTa < 2:3334042/93‑1 (MQ=255) ccGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTa < 1:5430293/93‑1 (MQ=255) cGAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTAc < 2:5223614/93‑1 (MQ=255) gAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACt > 2:1792981/1‑93 (MQ=255) gAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACt > 1:6405223/1‑93 (MQ=255) gAAATGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACt > 1:3094186/1‑93 (MQ=255) aaTGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTaa < 1:1136057/93‑1 (MQ=255) aaTGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTaa > 1:2926225/1‑93 (MQ=255) aaTGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTaa > 1:5724855/1‑93 (MQ=255) aTGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTAAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAAt < 2:2092686/93‑1 (MQ=255) tGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATg < 2:7880347/93‑1 (MQ=255) tGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATg < 1:1310854/93‑1 (MQ=255) tGCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATg > 2:7487104/1‑93 (MQ=255) gCTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGc > 1:706945/1‑93 (MQ=255) gtGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCTCCAGCGTCTGAAAGCCCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGcc < 1:2449116/92‑1 (MQ=255) cTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGcc < 1:4449154/93‑1 (MQ=255) cTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGcc < 2:2114221/93‑1 (MQ=255) cTGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGcc < 1:2079924/93‑1 (MQ=255) tGTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCcg < 2:1402237/93‑1 (MQ=255) gTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCcga < 1:7611442/93‑1 (MQ=255) gTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCcga > 1:394278/1‑93 (MQ=255) gTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCcga < 2:7457093/93‑1 (MQ=255) gTCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCcga < 2:5584049/93‑1 (MQ=255) tCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCcgac > 1:6665688/1‑93 (MQ=255) tCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCcgac < 2:5791189/93‑1 (MQ=255) tCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCcgac > 2:3126569/1‑93 (MQ=255) tCGATGGCGG‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCcgac > 2:4268867/1‑93 (MQ=255) | AACTGGCTACAG‑CTGAAGGATTG‑ATTGCGT‑T‑‑GTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑G‑GG‑‑AAA‑GCTGCATTATGGGCAGTGGCCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑GAAGTGATTGGTACTAATGCCGACGAC > NC_000913/4008399‑4008551 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |