BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,008,525	+G	intergenic (+92/‑141)	b4555 → / → yigM	hypothetical protein/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,008,524	1	.	G	100.0%	1118.8 / NA	347	intergenic (+91/‑142)	b4555/yigM	hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand): ref base . (0/0); new base G (161/186); total (161/186)

Only 100 of 380 total aligned reads displayed.

CGGGATGAACGACGCCGAAATGCTGTCGATGGC‑G‑GGAAA‑GCTGCATTATGGGCAGTG‑GCCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑GAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCAGTT  >  NC_000913/4008434‑4008611

cGGGATGAACGACGCCGAAATGCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTG‑CGCACCAGCGTCTGAAAGACCTTCATCCCGAGCt                                                                                          >  2:4069166/1‑93 (MQ=255)

cGGGATGAACGACGCCGAAATGCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTG‑CGCACCAGCGTCTGAAAGACCTTCATCCCGAGCt                                                                                          <  1:7232807/93‑1 (MQ=255)

 gggATGAACGACGCCGAAATGCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTG‑CGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑g                                                                                        >  1:5876092/1‑93 (MQ=255)

  ggATGAACGACGCCGAAATGCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTG‑CGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑gg                                                                                       >  1:6182088/1‑92 (MQ=255)

   gATGAACGACGCCGAAATGCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTG‑CGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑gga                                                                                      >  1:1429259/1‑91 (MQ=255)

   gATGAACGACGCCGAAATGCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTG‑CGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑gga                                                                                      >  2:3424089/1‑91 (MQ=255)

    aTGAACGACGCCGAAATGCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTG‑CGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑ggaa                                                                                     >  2:6032102/1‑90 (MQ=255)

     tGAACGACGCCGAAATGCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTG‑CGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑ggaag                                                                                    <  2:6595280/93‑5 (MQ=255)

       aaCGACGCCGAAATGCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTG‑CGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTg                                                                                   >  1:7658368/1‑93 (MQ=255)

       aaCGACGCCGAAATGCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTG‑CGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTg                                                                                   >  2:4503784/1‑93 (MQ=255)

        acgacgCCGAAATGCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTG‑CGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGa                                                                                  <  2:7380003/93‑1 (MQ=255)

        acgacgCCGAAATGCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTG‑CGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGa                                                                                  <  2:6265685/93‑1 (MQ=255)

         cgacgCCGAAATGCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTG‑CGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGAt                                                                                 >  1:1715506/1‑93 (MQ=255)

         cgacgCCGAAATGCTGTCGATGGC‑GTGGAAAGGCTGCATTATGGGCAGTG‑CGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGAt                                                                                 <  1:4664415/93‑1 (MQ=255)

          gacgCCGAAATGCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTG‑CGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGAtt                                                                                >  1:6261266/1‑93 (MQ=255)

            cgCCGAAATGCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTG‑CGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTgg                                                                              <  2:2382457/93‑1 (MQ=255)

              ccGAAATGCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTG‑CGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTa                                                                            <  1:5430293/93‑1 (MQ=255)

               cGAAATGCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTG‑CGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTAc                                                                           <  2:522793/93‑1 (MQ=255)

                gAAATGCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTG‑CGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACt                                                                          >  1:6405223/1‑93 (MQ=255)

                gAAATGCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTG‑CGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACt                                                                          >  1:4371889/1‑93 (MQ=255)

                 aaaTGCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTG‑CGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTa                                                                         >  1:7863633/1‑93 (MQ=255)

                  aaTGCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTG‑CGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTaa                                                                        <  2:3206015/93‑1 (MQ=255)

                   aTGCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTG‑CGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAAt                                                                       <  2:4371888/93‑1 (MQ=255)

                   aTGCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTG‑CGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAAt                                                                       >  2:3903730/1‑93 (MQ=255)

                   aTGCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTG‑CGCACCAGCGTCTAAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAAt                                                                       <  2:2092686/93‑1 (MQ=255)

                    tGCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTG‑CGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATg                                                                      <  2:7880347/93‑1 (MQ=255)

                     gCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTG‑CGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGc                                                                     >  1:5144967/1‑93 (MQ=255)

                     gCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTG‑CGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGc                                                                     >  1:2103308/1‑93 (MQ=255)

                       tGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTG‑CGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCcg                                                                   >  1:5691030/1‑93 (MQ=255)

                       tGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTG‑CGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCcg                                                                   <  2:1402237/93‑1 (MQ=255)

                         tCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTG‑CGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCcgac                                                                 >  2:4268867/1‑93 (MQ=255)

                           gATGGCGG‑GGAAAGGCTGCATTATGGGCAGTG‑CGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCcgacga                                                               <  1:534086/93‑1 (MQ=255)

                            aTGGCGG‑GGAAAGGCTGCATTATGGGCAGTG‑CGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCgacgac                                                              <  1:679844/93‑1 (MQ=255)

                              ggcgg‑ggAAAGGCTGCATTATGGGCAGTGCGCCA‑CAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGAcgc                                                            <  1:6118673/89‑1 (MQ=255)

                              ggcgg‑ggAAAGGCTGCATTATGGGCAGTG‑CGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGAcgc                                                            >  2:6342295/5‑93 (MQ=255)

                              ggcgg‑ggAAAGGCTGCATTATGGGCAGTG‑CGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGAcgc                                                            <  2:1249801/89‑1 (MQ=255)

                                cgg‑ggAAAGGCTGCATTATGGGCAGTG‑CGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCgg                                                          <  2:4833486/91‑1 (MQ=255)

                                cgg‑ggAAAGGCTGCATTATGGGCAGTG‑CGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCgg                                                          <  1:1247214/91‑1 (MQ=255)

                                  g‑ggAAAGGCTGGATTATGGGCAGTG‑CGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTg                                                        <  2:5411092/93‑1 (MQ=255)

                                    ggAAAGGCTGCATTATGGGCAGTG‑CGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGc                                                       <  2:6505524/93‑1 (MQ=255)

                                       aaggCTGCATTATGGGCAGTG‑CGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGc                                                    >  1:7754870/4‑93 (MQ=255)

                                         ggCTGCATTATGGGCAGTG‑CGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCAt                                                  <  1:877714/92‑1 (MQ=255)

                                          gCTGCATTATGGGCAGTG‑CGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCAtt                                                 >  1:4838368/1‑93 (MQ=255)

                                           cTGCATTATGGGCAGTG‑CGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTa                                                <  2:5713371/93‑1 (MQ=255)

                                            tGCATTATGGGCAGTG‑CGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTAt                                               <  2:403576/93‑1 (MQ=255)

                                            tGCATTATGGGCAGTG‑CGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTAt                                               >  1:7562367/1‑93 (MQ=255)

                                            tGCATTATGGGCAGTG‑CGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTAt                                               >  1:2628251/1‑93 (MQ=255)

                                             gCATTATGGGCAGTG‑CGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATc                                              >  1:6575702/1‑93 (MQ=255)

                                             gCATTATGGGCAGTG‑CGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATc                                              >  2:2846964/1‑93 (MQ=255)

                                              cATTATGGGCAGTG‑CGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCt                                             >  2:1583881/1‑93 (MQ=255)

                                              cATTATGGGCAGTG‑CGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCt                                             <  1:2476241/93‑1 (MQ=255)

                                              cATTATGGGCAGTG‑CGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCt                                             <  2:4542945/93‑1 (MQ=255)

                                                ttATGGGCAGTG‑CGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGc                                           <  2:7237980/93‑1 (MQ=255)

                                                ttATGGGCAGTG‑CGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGc                                           >  1:1084314/1‑93 (MQ=255)

                                                ttATGGGCAGTG‑CGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGc                                           <  1:338772/93‑1 (MQ=255)

                                                ttATGGGCAGTG‑CGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGc                                           >  1:4289329/1‑93 (MQ=255)

                                                ttATGGGCAGTG‑CGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCAGACGACGCGGTGCCGCATTATCTGc                                           <  1:6936037/93‑1 (MQ=255)

                                                 tATGGGCAGTG‑CGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCg                                          >  1:7320193/1‑93 (MQ=255)

                                                   tGGGCAGTG‑CGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTa                                        >  2:4751093/1‑93 (MQ=255)

                                                   tGGGCAGTG‑CGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTa                                        >  1:2168253/1‑93 (MQ=255)

                                                   tGGGCAGTG‑CGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTa                                        >  2:5047312/1‑93 (MQ=255)

                                                   tGGGCAGTG‑CGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTa                                        >  2:1748615/1‑93 (MQ=255)

                                                    gggCAGTG‑CGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTaa                                       <  2:2203663/93‑1 (MQ=255)

                                                    gggCAGTG‑CGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTaa                                       >  1:5860415/1‑93 (MQ=255)

                                                    gggCAGTA‑CGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTaa                                       <  2:7449042/93‑1 (MQ=255)

                                                     ggCAGTG‑CGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTaaa                                      <  1:2831314/93‑1 (MQ=255)

                                                      gCAGTG‑CGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAAc                                     >  1:4074173/1‑93 (MQ=255)

                                                       cAGTG‑CGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAAct                                    <  1:5224807/93‑1 (MQ=255)

                                                           tgcgcaccaGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTa                                 >  2:1022872/5‑93 (MQ=255)

                                                           tgcgcaccaGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTa                                 <  1:3958639/89‑1 (MQ=255)

                                                              gcaccaGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTAttt                              >  2:3011864/2‑93 (MQ=255)

                                                              gcaccaGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTAttt                              <  2:6187625/92‑1 (MQ=255)

                                                              gcaccaGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTAttt                              <  2:575428/92‑1 (MQ=255)

                                                               caccaGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTa                             <  1:5517056/93‑1 (MQ=255)

                                                               caccaGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTa                             <  2:1900714/93‑1 (MQ=255)

                                                               caccaGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTa                             <  1:326276/93‑1 (MQ=255)

                                                                cccaGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTAt                            <  2:3477739/92‑1 (MQ=255)

                                                                accaGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTAt                            >  2:6682862/1‑93 (MQ=255)

                                                                accaGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTAt                            >  1:3028198/1‑93 (MQ=255)

                                                                  caGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCg                          <  1:1538945/93‑1 (MQ=255)

                                                                   aGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGt                         >  2:7603628/1‑93 (MQ=255)

                                                                      gTCTGAAAGACTTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGGCGCATTATCTGCGTAAACTCTATTTATCGTAAt                      <  2:6404788/93‑1 (MQ=255)

                                                                      gTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAAt                      <  1:3179688/93‑1 (MQ=255)

                                                                       gcTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATc                     <  1:6065592/92‑1 (MQ=255)

                                                                        cTGAAATACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCg                    <  1:1975079/93‑1 (MQ=255)

                                                                         tGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGt                   >  1:3482997/1‑93 (MQ=255)

                                                                         tGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGt                   >  1:4479584/1‑93 (MQ=255)

                                                                         tGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGt                   >  2:4177519/1‑93 (MQ=255)

                                                                             aGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCtt               <  2:3746606/93‑1 (MQ=255)

                                                                               aCCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTa             <  1:3600034/93‑1 (MQ=255)

                                                                               aCCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTa             >  1:4789935/1‑93 (MQ=255)

                                                                                 cTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTAtt           <  2:825140/93‑1 (MQ=255)

                                                                                 cTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTAtt           >  1:1019087/1‑93 (MQ=255)

                                                                                 cTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTAtt           <  2:6793203/93‑1 (MQ=255)

                                                                                 cTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTAtt           >  1:2321087/1‑93 (MQ=255)

                                                                                   tCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTg         <  1:7102675/93‑1 (MQ=255)

                                                                                     aTCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGt       >  2:6934701/1‑93 (MQ=255)

                                                                                     aTCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGt       >  2:2149993/1‑93 (MQ=255)

                                                                                       cccGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCa     <  1:6469903/93‑1 (MQ=255)

                                                                                        ccGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCAg    >  2:1667431/1‑93 (MQ=255)

CGGGATGAACGACGCCGAAATGCTGTCGATGGC‑G‑GGAAA‑GCTGCATTATGGGCAGTG‑GCCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑GAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCAGTT  >  NC_000913/4008434‑4008611

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`