BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,031,984	+C	coding (1250/1299 nt)	trkH →	TrkH

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,031,983	1	.	C	100.0%	989.5 / NA	317	A417P (GCA→CCA)	trkH	TrkH
Reads supporting (aligned to +/- strand): ref base . (0/0); new base C (160/157); total (160/157)

Only 100 of 339 total aligned reads displayed.

TCGCGCACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑G‑CACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGCTGATAA  >  NC_000913/4031892‑4032070

tCGCGCACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑G‑c                                                                                        >  1:4475140/1‑93 (MQ=255)

tCGCGCACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑G‑c                                                                                        >  2:1880145/1‑93 (MQ=255)

tCGCGCACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑G‑c                                                                                        <  1:3526256/93‑1 (MQ=255)

 cgcgCACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑G‑cc                                                                                       <  1:5737952/93‑2 (MQ=255)

  gcgcACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑G‑cca                                                                                      <  1:1905090/93‑3 (MQ=255)

  gcgcACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑G‑cca                                                                                      >  1:2311836/1‑91 (MQ=255)

  gcgcACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑G‑cca                                                                                      >  1:3936105/1‑91 (MQ=255)

   cgcACTCCCGGAACGTATCCTCGAAGCCGTTTGGGGCTTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑G‑ccac                                                                                     <  2:1364957/93‑4 (MQ=255)

       cTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGc                                                                                  >  1:592130/1‑93 (MQ=255)

       cTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGc                                                                                  <  1:5111727/93‑1 (MQ=255)

        tGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTTTCTC‑CACGGGCg                                                                                 >  2:3234238/1‑93 (MQ=255)

        tGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCg                                                                                 <  1:99267/93‑1 (MQ=255)

            ggAACGTATCCTCGAAGCCGTTTGGGTATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGa                                                                             <  2:1216978/93‑1 (MQ=255)

             gAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGAt                                                                            <  1:3244362/93‑1 (MQ=255)

             gAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGAt                                                                            >  2:2241820/1‑93 (MQ=255)

             gAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGAt                                                                            >  1:5404880/1‑93 (MQ=255)

              accGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATg                                                                           <  2:2119998/91‑1 (MQ=255)

              aaCGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATg                                                                           >  1:809238/1‑93 (MQ=255)

              aaCGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATg                                                                           >  1:4828063/1‑93 (MQ=255)

               aCGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGa                                                                          <  2:2873440/93‑1 (MQ=255)

                cGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGAc                                                                         <  2:3504980/93‑1 (MQ=255)

                 gTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGG‑CACGGGCGGGGTTTACt                                                                        >  1:5784297/1‑93 (MQ=255)

                  tATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACtt                                                                       <  2:1559916/93‑1 (MQ=255)

                  tATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACtt                                                                       >  1:1403560/1‑93 (MQ=255)

                   aTCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACttt                                                                      >  2:300305/1‑93 (MQ=255)

                     ccTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTc                                                                    <  2:676941/93‑1 (MQ=255)

                        cGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGc                                                                 <  1:4405541/93‑1 (MQ=255)

                        cGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGc                                                                 <  2:7161223/93‑1 (MQ=255)

                           aGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCtt                                                              >  1:6530780/1‑93 (MQ=255)

                           aGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCtt                                                              >  1:6464916/1‑93 (MQ=255)

                            gCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCttt                                                             <  1:3819657/93‑1 (MQ=255)

                            gCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCttt                                                             >  1:2120643/1‑93 (MQ=255)

                            gCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCttt                                                             >  2:80096/1‑93 (MQ=255)

                              cGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGc                                                           <  2:1982918/93‑1 (MQ=255)

                              cGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGc                                                           >  1:677446/1‑93 (MQ=255)

                                tttGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGt                                                         >  1:913254/1‑93 (MQ=255)

                                tttGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGACAGTATGCTGGCGATTATC‑GCCAGGGGCGTGGATGGCTTTTCTGCCTTTGCGt                                                         <  2:3996695/93‑1 (MQ=255)

                                 ttGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTc                                                        >  1:3689988/1‑93 (MQ=255)

                                    gggATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGgt                                                     <  2:7665837/93‑1 (MQ=255)

                                       aTTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGgttgt                                                  <  2:7392690/93‑1 (MQ=255)

                                       aTTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGgttgt                                                  <  1:3147618/93‑1 (MQ=255)

                                        attttCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGgttgtt                                                 >  1:2225662/2‑93 (MQ=255)

                                         ttttCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGttgttg                                                <  1:7250906/93‑1 (MQ=255)

                                          tttCTCCCCCTATGCATGGGTGTTTATTGGCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATTACTTTTCTGCCTTTGCGTCGGTTGTTGc                                               <  1:1826874/93‑1 (MQ=255)

                                            tctcCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGa                                             >  2:5069144/1‑93 (MQ=255)

                                              cccGCTTATGTATTGGTTTTTATTGTAAGTAGGCGGGGGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACa                                           <  2:7874092/92‑1 (MQ=255)

                                                 gCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTg                                        >  1:5294061/1‑93 (MQ=255)

                                                 gCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTg                                        <  2:7538209/93‑1 (MQ=255)

                                                 gCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTg                                        <  2:6617885/93‑1 (MQ=255)

                                                  ccTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTCTC‑GCCACGGGCGCGGATTCCGTTTTGGCCTTTGCGTGGGTTGGTTGGACATTGa                                       >  1:379865/1‑93 (MQ=255)

                                                  ccTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGa                                       <  1:3005958/93‑1 (MQ=255)

                                                   cTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGaa                                      >  2:5009639/1‑93 (MQ=255)

                                                    tATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAAt                                     <  1:2866385/93‑1 (MQ=255)

                                                    tATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAAt                                     >  1:459656/1‑93 (MQ=255)

                                                    tATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAAt                                     >  2:5982188/1‑93 (MQ=255)

                                                     aTGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATa                                    >  2:1115277/1‑93 (MQ=255)

                                                     aTGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATa                                    >  2:4648668/1‑93 (MQ=255)

                                                     aTGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATa                                    >  1:4233545/1‑93 (MQ=255)

                                                      tGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATaa                                   <  1:2917797/93‑1 (MQ=255)

                                                      tGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATaa                                   >  2:2649933/1‑93 (MQ=255)

                                                      tGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATaa                                   <  2:13/93‑1 (MQ=255)

                                                       gCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAAc                                  <  1:5460365/93‑1 (MQ=255)

                                                       gCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAAc                                  <  1:6009324/93‑1 (MQ=255)

                                                       gCATTGGTGTTTAATGTCAGTATGATGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAAc                                  <  1:6997583/93‑1 (MQ=255)

                                                       gCATTGGCGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGAGTCGCTTGTTGCGACATTGAATTAc                                  >  2:3185674/1‑93 (MQ=255)

                                                        cATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAAcc                                 >  1:7799470/1‑93 (MQ=255)

                                                         aTTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCt                                <  1:617699/93‑1 (MQ=255)

                                                         aTTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCt                                >  2:3666727/1‑93 (MQ=255)

                                                          ttGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTg                               <  1:1287520/93‑1 (MQ=255)

                                                          ttGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTg                               <  1:2032744/93‑1 (MQ=255)

                                                          ttGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTg                               >  2:5497061/1‑93 (MQ=255)

                                                          ttGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTg                               <  1:1002662/93‑1 (MQ=255)

                                                           tGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTgg                              >  1:7434504/1‑93 (MQ=255)

                                                            ggTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTggg                             <  2:5888038/93‑1 (MQ=255)

                                                              tgtTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGCGGATGACTTTTCTTCCTTTGCGTCGGTTGTTTCGACATTGAATAACCTGGGGc                           >  2:6586249/1‑93 (MQ=255)

                                                               gtTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGcc                          >  2:3398110/1‑93 (MQ=255)

                                                                 ttATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAg                        <  2:123968/93‑1 (MQ=255)

                                                                   aTTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAggg                      >  2:5132451/1‑93 (MQ=255)

                                                                    ttGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGc                     >  1:4952385/1‑93 (MQ=255)

                                                                     tGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCt                    <  2:4523990/93‑1 (MQ=255)

                                                                      gTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCtt                   >  2:1075128/1‑93 (MQ=255)

                                                                        cAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTgg                 <  2:4072766/93‑1 (MQ=255)

                                                                        cAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTgg                 <  1:4628543/93‑1 (MQ=255)

                                                                        cAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTgg                 <  2:7110894/93‑1 (MQ=255)

                                                                         aGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGc                <  2:3809062/93‑1 (MQ=255)

                                                                          gTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCg               >  2:4288331/1‑93 (MQ=255)

                                                                           tATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCgg              >  2:7228100/1‑92 (MQ=255)

                                                                           tATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCgg              >  1:1532275/1‑92 (MQ=255)

                                                                            aTGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTg             >  2:1747109/1‑93 (MQ=255)

                                                                            aTGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTg             >  1:6355906/1‑93 (MQ=255)

                                                                             tGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTgg            >  2:2457554/1‑93 (MQ=255)

                                                                                tGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTg         >  2:446357/1‑93 (MQ=255)

                                                                                tGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTg         >  1:5164740/1‑93 (MQ=255)

                                                                                tGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTg         <  2:555994/93‑1 (MQ=255)

                                                                                tGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTg         <  1:4733737/93‑1 (MQ=255)

                                                                                 ggCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGc        >  1:241877/1‑93 (MQ=255)

                                                                                  gCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGCt       <  2:6360792/93‑1 (MQ=255)

                                                                                     aTTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGATATTGAATAACCTGGGGCCAGGGCTTGGCGTGGCTGCTGAt    >  1:7687638/1‑93 (MQ=255)

                                                                                     aTTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGCTGAt    >  2:6909032/1‑93 (MQ=255)

                                                                                     aTTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGCTGAt    >  1:7575464/1‑93 (MQ=255)

TCGCGCACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑G‑CACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGCTGATAA  >  NC_000913/4031892‑4032070

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`