| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 80,603 | (T)5→6 | coding (262/1401 nt) | leuC ← | 3‑isopropylmalate isomerase (dehydratase) subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 80,598 | 1 | . | T | 99.4% | 1122.2 / ‑2.2 | 315 | coding (267/1401 nt) | leuC | 3‑isopropylmalate isomerase (dehydratase) subunit |
| Reads supporting (aligned to +/- strand): ref base . (0/2); new base T (165/147); total (166/149) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.24e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 350 total aligned reads displayed.
GCAAGGTGACGCCCTGTTCCGGCCCCATTACGTGGACGATCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAG‑TTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCATG > NC_000913/80507‑80685 | cAAGGTGACGCCCTGTTCCGGCCCCATTACGTGGACGATCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAG‑tt < 2:7765456/93‑1 (MQ=255) cAAGGTGACGCCCTGTTCCGGCCCCATTACGTGGACGATCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAG‑tt < 1:5291177/93‑1 (MQ=255) cAAGGTGACGCCCTGTTCCGGCCCCATTACGTGGACGATCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAG‑tt < 1:632892/93‑1 (MQ=255) aaGGTGACGCCCTGTTCCGGCCCCATTACGTGGACGATCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAG‑ttt < 1:1198846/93‑1 (MQ=255) aGGTGACGCCCTGTTCCGGCCCCATTACGTGGACGATCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAG‑tttt > 2:7614436/1‑93 (MQ=255) aGGTGACGCCCTGTTCCGGCCCCATTACGTGGACGATCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAG‑tttt < 1:2195111/93‑1 (MQ=255) gTGACGCCCTGTTCCGGCCCCATTACGTGGACGATCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAG‑tttttt < 1:5546695/93‑2 (MQ=255) gTGACGCCCTGTTCCGGCCCCATTACGTGGACGATCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAG‑tttttt < 1:2687060/93‑2 (MQ=255) tGACGCCCTGTTCCGGCCCCATTACGTGGACGATCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAG‑ttttttg < 2:1651826/93‑3 (MQ=255) ggACGCCCTGTTCCGGCCCCATTACGTGGACGATCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAG‑ttttttg < 1:353784/92‑3 (MQ=255) aCGCCCTGTTCCGGCCCCATTACGTGGACGATCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAG‑ttttttgat < 2:6240696/93‑5 (MQ=255) gCCCTGTTCCGGCCCCATTACGTGGACGATCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTTGATCa < 2:7810583/93‑1 (MQ=255) gCCCTGTTCCGGCCCCATTACGTGGACGATCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTTGATCa < 1:3614843/93‑1 (MQ=255) ccccTGTTCCGGCCCCATTACGTGGACGATCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTTGATCa < 2:1066637/92‑1 (MQ=255) cccTGTTCCGGCCCCATTACGTGGACGATCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTTGATCAg > 1:4735159/1‑93 (MQ=255) ccTGTTCCGGCCCCATTACGTGGACGATCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTTGATCAGt < 1:3178479/93‑1 (MQ=255) ccTGTTCCGGCCCCATTACGTGGACGATCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTTGATCAGt > 2:3843264/1‑93 (MQ=255) cTGTTCCGGCCCCATTACGTGGACGATCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTTGATCAGtt > 1:2938927/1‑93 (MQ=255) cTGTTCCGGCCCCATTACGTGGACGATCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTTGATCAGtt < 2:5181288/93‑1 (MQ=255) cTGTTCCGGCCCCATTACGTGGACGATCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTTGATCAGtt > 2:7653787/1‑93 (MQ=255) tGTTCCGGCCCCATTACGTGGACGATCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAACTTCTTTGCAGTTTTTTGATCAGTTc > 2:1769847/1‑93 (MQ=255) tGTTCCGGCCCCATTACGTGGACGATCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTTGATCAGTTc > 1:7502216/1‑93 (MQ=255) tGTTCCGGCCCCATTACGTGGACGATCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTTGATCAGTTc > 1:6494243/1‑93 (MQ=255) ttCCGGCCCCATTACGTGGACGATCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTTGATCAGTTCCt > 2:6935518/1‑93 (MQ=255) ccGGCCCCATTACGTGGACGATCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTTGATCAGTTCCTGc < 2:2917273/93‑1 (MQ=255) cGGCCCCATTACGTGGACGATCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTTGATCAGTTCCTGCa > 2:6365607/1‑93 (MQ=255) ggCCCCATTACGTGGACGATCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTTGATCAGTTCCTGCAt > 1:2763887/1‑93 (MQ=255) ccccATTACGTGGACGATCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTTGATCAGTTCCTGCATCt < 1:220615/93‑1 (MQ=255) ccccATTACGTGGACGATCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCCTTGCAGTTTTTTGATCATTTCCTGCATCt > 1:801383/1‑93 (MQ=255) cccATTACGTGGACGATCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTTGATCAGTTCCTGCATCTg > 2:7332242/1‑93 (MQ=255) cccATTACGTGGACGATCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGATTTTTGATCAGTTCCTGCATCTg > 2:5654654/1‑93 (MQ=255) ccATTACGTGGACGATCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTTGATCAGTTCCTGCATCTgg > 1:186276/1‑93 (MQ=255) cATTACGTGGACGATCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTTGATCAGTTCCTGCATCTGGa > 2:5592094/1‑93 (MQ=255) cATTACGTGGACGATCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTTGATCAGTTCCTGCATCTGGa > 2:495831/1‑93 (MQ=255) aTTACGTGGACGATCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTTGATCAGTTCCTGCATCTGGAt < 2:2020284/93‑1 (MQ=255) aTTACGTGGACGATCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTTGATCAGTTCCTGCATCTGGAt > 1:3060625/1‑93 (MQ=255) aCGTGGACGATCCCCTGATACGGCTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTTGATCAGTTCCTGCATCTGGATAcg < 1:246899/93‑1 (MQ=255) cGTGGACGATCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTTGATCAGTTCCTGCATCTGGATAcgc > 1:1685714/1‑93 (MQ=255) gACGATCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTTGATCAGTTCCTGCATCTGGATACGCGCCa < 2:1264951/93‑1 (MQ=255) gcGATCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTTGATCAGTTCCTGCATCTGGATACGCGCCAt < 1:1026455/92‑1 (MQ=255) aCGATCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTTGATCAGTTCCTGCATCTGGATACGCGCCAt < 2:2073740/93‑1 (MQ=255) aTCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTc > 1:4036877/1‑93 (MQ=255) aTCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTc > 1:6927710/1‑93 (MQ=255) aTCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTc > 1:5029078/1‑93 (MQ=255) tCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCa > 2:7242417/1‑93 (MQ=255) ccTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCg < 2:5503532/93‑1 (MQ=255) ccTGATACGGGCGATTCAGGTCATACAGTTCGACGCCAACTTCTTTGCAGTTTTTTGATCAGCTCCTGCATCTGGATACGCCCCATTTCACCg > 2:656092/1‑93 (MQ=255) cTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGc > 2:2778660/1‑93 (MQ=255) cTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGc > 2:2472695/1‑93 (MQ=255) cTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGc < 1:7091919/93‑1 (MQ=255) cTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGc < 1:2305701/93‑1 (MQ=255) cTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGc < 1:4057679/93‑1 (MQ=255) gATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAg < 1:5787742/93‑1 (MQ=255) aTACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAgg > 2:1191759/1‑93 (MQ=255) aTACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAgg > 1:160835/1‑93 (MQ=255) aCGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCa < 2:5766615/93‑1 (MQ=255) aCGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCa < 2:2543715/93‑1 (MQ=255) aCGGGTGATTCAGGTCACACAGTTCGACGCCAAATTCTTTGCAG‑TTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCAt < 1:2059474/93‑1 (MQ=255) cGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCAt < 1:4344456/93‑1 (MQ=255) gggTGATTCAGGTCATACCGTTCGACGCCAAATTCTTTGCAGTTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCAtt > 1:1791030/1‑93 (MQ=255) ggTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTa < 2:96011/93‑1 (MQ=255) gTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTaa < 2:3459971/93‑1 (MQ=255) gTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTaa < 1:7297852/93‑1 (MQ=255) tGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAAt < 1:1281558/93‑1 (MQ=255) aTTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGt < 2:2241873/93‑1 (MQ=255) aTTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGt > 2:3974991/1‑93 (MQ=255) cAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCtt < 1:6742171/93‑1 (MQ=255) cAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCtt < 2:4235583/93‑1 (MQ=255) gTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTgg > 1:5844866/1‑93 (MQ=255) cATACAGTTCGACGCCAAATTCTTTGCAGTTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTc < 1:2876211/93‑1 (MQ=255) cATACAGTTCGACGCCAAATTCTTTGCAGTTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTc < 2:6715470/93‑1 (MQ=255) aTACAGTTCGACGCCAAATTCTTTGCAGTTTTTTGATCAGTTCCTGCATCTGGATACGCGCCGTTTCACCGCAGGCATTAATGTCTTTGGTCt > 1:1392645/1‑93 (MQ=255) tACAGTTCGACGCCAAATTCTTTGCAGTTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTg > 2:5898473/1‑93 (MQ=255) aCAGTTCGACGCCAAATTCTTTGCAGTTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTgg < 1:6089040/93‑1 (MQ=255) aCAGTTCGACGCCAAATTCTTTGCAGTTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTgg < 2:4428416/93‑1 (MQ=255) cAGTTCGACGCCAAATTCTTTGCAGTTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTggg < 1:3757022/93‑1 (MQ=255) gtgcGACGCCAAATTCTTTGCAGTTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTa < 1:4199950/90‑1 (MQ=255) ttCGACGCCAAATTCTTTGCAGTTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTag > 1:7773005/1‑93 (MQ=255) ttCGACGCCAAATTCTTTGCAGTTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTag < 2:6474299/93‑1 (MQ=255) cGACACCAAATTCTTTGCAGTTTTTTGATCAGTTCATGCATCGGGATAGGCGCCATTTCACCGCATGCATTAATGTCTTTGGTCTGGGTagag < 2:3694608/93‑1 (MQ=255) gACGCCAAATTCTTTGCAGTTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAgaga < 1:6972102/93‑1 (MQ=255) aCGCCAAATTCTTTGCAGTTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAgagat > 1:7711957/1‑92 (MQ=255) aCGCCAAATTCTTTGCAGTTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGAc > 2:5481301/1‑93 (MQ=255) gCCAAATTCTTTGCAGTTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGt < 2:5127126/93‑1 (MQ=255) ccAAATTCTTTGCAGTTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGtt < 2:3249469/93‑1 (MQ=255) cAAATTCTTTGCAGTTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTtg < 1:2854872/93‑1 (MQ=255) cAAATTCTTTGCAGTTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTtg > 1:5434944/1‑93 (MQ=255) aaaTTCTTTGCAGTTTTTTGATCGGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTtgt > 2:1531323/1‑93 (MQ=255) aaTTCTTTGCAGTTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTtgtg > 2:852495/1‑93 (MQ=255) aTTCTTTGCAGTTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGa > 2:7414363/1‑93 (MQ=255) ttCTTTGCAGTTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGAt > 2:2861929/1‑93 (MQ=255) tCTTTGCAGTTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGATc < 2:2327079/93‑1 (MQ=255) tttGCAGTTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGATGTTGTGATCCa < 2:4901250/93‑1 (MQ=255) tttGCAGTTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCa < 2:6078192/93‑1 (MQ=255) tttGCAGTTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCa > 1:3502271/1‑93 (MQ=255) tttGCAGTTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCa > 1:4225153/1‑93 (MQ=255) tttGCAGTTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCa > 1:4949625/1‑93 (MQ=255) tttGCAGTTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCa > 2:1863555/1‑93 (MQ=255) ttGCAGTTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCAt < 1:4699985/93‑1 (MQ=255) ttGCAGTTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCAt < 1:4372544/93‑1 (MQ=255) | GCAAGGTGACGCCCTGTTCCGGCCCCATTACGTGGACGATCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAG‑TTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCATG > NC_000913/80507‑80685 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |