BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,096,803	(G)_7→8	noncoding (73/88 nt)	serX ←	tRNA‑Ser

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,096,796	1	.	G	96.7%	213.0 / 2.3	90	noncoding (80/88 nt)	serX	tRNA‑Ser
Reads supporting (aligned to +/- strand): ref base . (0/3); new base G (45/42); total (45/45)
Fisher's exact test for biased strand distribution p-value = 2.42e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.22e-01

Only 100 of 102 total aligned reads displayed.

TTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GA‑‑G‑GGGGGG‑‑ATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTC  >  NC_000913/1096717‑1096883

ttCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCg                                                                             >  2:3906836/1‑93 (MQ=0)

ttCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCg                                                                             >  2:324491/1‑93 (MQ=0)

ttCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCg                                                                             >  1:7709793/1‑93 (MQ=0)

 tctcATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGa                                                                            >  1:6964472/1‑93 (MQ=9)

  ctcATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGag                                                                           >  2:3803287/1‑92 (MQ=9)

  ctcATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGag                                                                           >  2:1692494/1‑92 (MQ=9)

    cATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGAGcc                                                                         <  2:54413/93‑1 (MQ=255)

     aTCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGAGccc                                                                        >  2:35661/1‑93 (MQ=255)

      tCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGAGcccc                                                                       <  1:103198/93‑1 (MQ=255)

      tCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGAGcccc                                                                       <  2:6434224/93‑1 (MQ=255)

       ccccccGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGAGccccc                                                                      <  1:911531/93‑1 (MQ=255)

       ccccccGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGAGccccc                                                                      <  2:5849323/93‑1 (MQ=11)

        cccccGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑GTTCGAGCCCCCg                                                                     >  2:7441216/1‑93 (MQ=11)

         ccccGGTGTGTGCAATATACGAAAAAAAAGCCCGTTCTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGAGCCCCCGa                                                                    <  2:7640595/93‑1 (MQ=11)

         ccccGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGAGCCCCCGa                                                                    <  2:7640594/93‑1 (MQ=11)

          cccGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGAGCCCCCGAt                                                                   <  1:7900916/93‑1 (MQ=255)

          cccGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGAGCCCCCGAt                                                                   <  1:404745/93‑1 (MQ=11)

           ccGTTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGAGCCCCCGATa                                                                  <  1:743907/93‑1 (MQ=14)

           ccGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGAGCCCCCGATa                                                                  >  2:5295540/1‑93 (MQ=255)

           ccGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGAGCCCCCGATa                                                                  <  1:1839970/93‑1 (MQ=255)

            cGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑GTTCGAGCGCCCGATAc                                                                 >  2:6782300/1‑93 (MQ=11)

            cGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGAGCCCCCGATAc                                                                 <  1:274917/93‑1 (MQ=14)

            cGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTCCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGAGCCCCCGATAc                                                                 <  1:2421297/93‑1 (MQ=14)

             ggTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGAGCCCCCGATACg                                                                >  2:2812666/1‑93 (MQ=255)

              gtgtgtGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑GTTCGAGGCCCCGATACGt                                                               >  2:7116452/1‑93 (MQ=11)

              gtgtgtGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGAGCCCCCGATACGt                                                               <  2:6064435/93‑1 (MQ=255)

              gtgtgtGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGAGCCCCCGATACGt                                                               <  1:7699575/93‑1 (MQ=255)

              gtgtgtGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGAGCCCCCGATACGt                                                               >  2:7751537/1‑93 (MQ=255)

              gtgtgtGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGAGCCCCCGATACGt                                                               >  1:7150776/1‑93 (MQ=255)

              gtgtgtGCAATAAACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGAGCCCCCGATACGt                                                               <  2:1991747/93‑1 (MQ=14)

               tgtgtgCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑GTTCGAGCCCCCGATACggt                                                              >  2:7835933/1‑91 (MQ=14)

               tgtgtgCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGAGCCCCCGATACGtt                                                              >  1:4547585/1‑93 (MQ=255)

               tgtgtgCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGAGCCCCCGATACGtt                                                              <  1:3246741/93‑1 (MQ=255)

                gtgtgCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGAGCCCCCGATACGTTg                                                             >  1:4363430/1‑93 (MQ=255)

                  gtgCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑GGTCGAGCCCCCGATACGTTGcc                                                           >  1:75678/1‑93 (MQ=14)

                  gtgCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGAGCCCCCGATACGTTGcc                                                           >  1:565345/1‑93 (MQ=255)

                   tgCAATATACGAAAAAAAAGCCCGTACTTTCGTGCTACCTCTACTTAAAAGATG‑GGGGT‑‑GA‑‑G‑GGGGGGGCATTCGACCCCCCGATACGTTgac                                                           <  2:5281983/93‑3 (MQ=9)

                   tgCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑GTTCGAGCCCCCGATACGTTGCCg                                                          >  2:4552469/1‑93 (MQ=14)

                    gCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGAGCCCCCGATACGTTGCCGt                                                         >  1:5921541/1‑93 (MQ=255)

                    gCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑CAG‑G‑GGGGGG‑‑GTTCGAGCCCCCGATACGTTGCCgg                                                         >  2:6189436/1‑92 (MQ=14)

                     cAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGAGCCCCCGATACGTTGCCGta                                                        <  2:1107710/93‑1 (MQ=14)

                      aaTATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGAGCCCCCGATACGTTGCCGtat                                                       <  2:1126137/93‑1 (MQ=14)

                      aaTATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GA‑‑G‑GGGGGG‑‑ATTCGAGCCCCCGATACGTTGCCGtata                                                      <  1:615680/93‑1 (MQ=255)

                       atatACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑GTTCGAGCCCCCGATACGTTACCGtata                                                      >  2:4626608/1‑93 (MQ=14)

                       atatACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGAGCCCCCGATACGTTGCCGtata                                                      <  2:210278/93‑1 (MQ=14)

                       atatACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGAGCCCCCGATACGTTGCCGtata                                                      <  1:2352399/93‑1 (MQ=255)

                       atatACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGAGCCCCCGATACGTTGCCGtata                                                      <  2:210277/93‑1 (MQ=14)

                       atatACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGAGCCCCCGATACGTTGCCGtata                                                      >  2:6150662/1‑93 (MQ=255)

                       atatACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGG‑‑GA‑‑GTGGGGGG‑‑CTTCGAGCCCCCGAGACGCTGGCGtata                                                      >  2:6766375/1‑93 (MQ=14)

                       atagACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGAGCCCCCGATACGTTGCCGtata                                                      <  1:1992327/93‑1 (MQ=14)

                        tataCGAAAAAAAAGCCCGTACTTTCGTACGAGTTCTTCTTTAATTATGAAGGGT‑‑AG‑‑G‑GGGGGG‑‑GTTCAAGCCCCAGATTCGTTGCCGtataa                                                     >  2:5874886/1‑92 (MQ=9)

                        tataCGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGAGCCCCCGATACGTTGCCGTATac                                                     >  1:4394124/1‑93 (MQ=255)

                        tataCGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGAGCCCCCGATACGTTGCCGTATac                                                     >  1:7492060/1‑93 (MQ=255)

                        aataCAAAAAAAAACCCCGTACTTCCGTACGAGCTCTTCTTAAAATATG‑GGGGTGGGG‑‑G‑GGGGGG‑‑ATTCGAGCCCCCGATACGTTGCCGtata                                                      <  2:723647/92‑1 (MQ=14)

                          taCGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑GTTCGAGGCCCCGATACGTTGCCGTATacac                                                   >  2:4222593/1‑93 (MQ=14)

                          taCGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑GTTCGAGCCCCCGATACGTTGCCGTATacac                                                   >  2:5923047/1‑93 (MQ=14)

                            cGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGAGCCCCCGATACGTTGCCGTATacacac                                                 <  1:6853480/93‑1 (MQ=255)

                            cGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGAGCCCCCGATACGTTGCCGTATacacac                                                 <  1:6907836/93‑1 (MQ=11)

                             gAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCg                                                                             >  2:5315705/1‑64 (MQ=0)

                             gAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCg                                                                             <  1:5315706/64‑1 (MQ=0)

                              aaaaaaaaGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGAGCCCCCGATACGTTGCCGTATACACACtt                                               <  1:5799283/93‑1 (MQ=255)

                              aaaaaaaaGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GA‑‑G‑GGGGGG‑‑ATTCGAGCCCCCGATACGTTGCCGTATACACACttt                                              <  1:1880549/93‑1 (MQ=37)

                               aaaaaaaGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑GTTCGAGCCCCCGATACGTTGCCGTATACACACttt                                              >  2:367773/1‑93 (MQ=14)

                               aaaaaaaGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGAGCCCCCGATACGTTGCCGTATACAAACttt                                              >  2:418953/1‑93 (MQ=14)

                                aaaaaaGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGG‑‑GAG‑G‑GGGGGG‑‑GTTCGAGCCCCCGATACGTTGCCGTATACACACTTTc                                             >  2:6692896/1‑93 (MQ=11)

                                 aaaaaGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGAGCCCCCGATACGTTGCCGTATACACACTTTcc                                            <  1:3813101/93‑1 (MQ=255)

                                 aaaaaGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGAGCCCCCGATACGTTGCCGTATACACACTTTcc                                            <  1:3813102/93‑1 (MQ=255)

                                 aaaaaGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGAGCCCCCGATACGTTGCCGTATACACACTTTcc                                            <  1:3736646/93‑1 (MQ=255)

                                 aaaaaGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGAGCCCCCGATACGTTGCCGTATACACACTTTcc                                            <  2:4166907/93‑1 (MQ=255)

                                 aaaaaGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGAGCCCCCGATACGTTGCCGTATACACACTTTcc                                            >  1:6415253/1‑93 (MQ=255)

                                 aaaaaGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGAGCCCCCGATACGTTGCCGTATACACACTTTcc                                            >  2:3436781/1‑93 (MQ=255)

                                  aaaaGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGAGCCCCCGATACGTTGCCGTATACACACTTTCCa                                           <  2:7865625/93‑1 (MQ=255)

                                  aaaaGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGAGCCCCCGATACGTTGCCGTATACACACTTTCCa                                           <  2:731109/93‑1 (MQ=255)

                                  aaaaGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGAGCCCCCGATACGTTGCCGTATACACACTTTCCa                                           <  1:1390329/93‑1 (MQ=255)

                                  aaaaGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGAGCCCCCGATACGTTGCCGTATACACACTTTCCa                                           <  1:4884978/93‑1 (MQ=255)

                                  aaaaGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGAGCCCCCGATACGTTGCCGTATACACACTTTCCa                                           <  1:2018177/93‑1 (MQ=255)

                                  aaaaGCCCGTACTTTCGTACANGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGAGCCCCCGATACGTTGCCGTATACACACTTTCCa                                           <  1:4611462/93‑1 (MQ=11)

                                   aaaGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑GTTCGAGCCCCCGATACGTTGCCGTATACACACTTTCCAg                                          >  2:7858131/1‑93 (MQ=14)

                                    aaGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGAGCCCCCGATACGTTGCCGTATACACACTTTCCAgg                                         >  1:2332311/1‑93 (MQ=255)

                                    aaGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGAGCCCCCGATACGTTGCCGTATACACACTTTCCAgg                                         >  2:47222/1‑93 (MQ=255)

                                     aGCCCGTACTTTCGTACGAGCTCTTCTTTAAAGATG‑GCGGA‑‑GAG‑G‑GGGGGG‑‑TTTCCAGGCCCCGATAAGTTGCCGTGTACACACTTTCCAggg                                        >  2:6584248/1‑92 (MQ=11)

                                      gCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGAGCCCCCGATACGTTGCCGTATACACACTTTCCAGGCg                                       >  2:6498629/1‑93 (MQ=255)

                                      gCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGG‑‑GAG‑G‑GGGGGG‑‑ATTCGAGCCCCCGATACGTTGCCGTATACACACTTTCCAGGCg                                       >  2:6570259/1‑93 (MQ=11)

                                        ccGTGCTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGAGCCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTg                                     <  1:4830767/93‑1 (MQ=11)

                                        ccGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAGGG‑GGGGGG‑‑ATTCGAGACCCCGATCCGTTGCCGTATAAACACTTTCCAAGCgg                                      >  1:3857882/1‑92 (MQ=11)

                                        ccGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGAGCCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTg                                     <  1:6544604/93‑1 (MQ=255)

                                         cGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑GTTCGAGCCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGc                                    >  2:7250732/1‑93 (MQ=11)

                                         cGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGAGCCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGc                                    <  2:5195748/93‑1 (MQ=255)

                                         cGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGAGCCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGc                                    >  1:6395819/1‑93 (MQ=255)

                                          gTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGAGCCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGcc                                   >  2:2088589/1‑92 (MQ=11)

                                          gTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGAGCCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCt                                   >  1:842331/1‑93 (MQ=255)

                                          gTACTTCCGTACGAGCTCTTCTTTAAATGTG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGAGCCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCt                                   <  1:4030903/93‑1 (MQ=11)

                                           tACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGGGACCCAGATAAGTTGGCGTATAAACACTTTCCAGGGGTGCTc                                  >  1:7588096/1‑93 (MQ=11)

                                           tACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGAGCCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTc                                  >  2:7888316/1‑93 (MQ=255)

                                           tACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGAGCCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTc                                  >  2:2752550/1‑93 (MQ=255)

                                           tACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGAGCCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTc                                  >  1:7588095/1‑93 (MQ=255)

                                           tACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGAGCCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTc                                  >  1:7588094/1‑93 (MQ=255)

                                           tACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGAGCCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTc                                  <  1:6015446/93‑1 (MQ=255)

                                           tACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GAG‑G‑GGGGGG‑‑ATTCGAGCCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTc                                  <  1:1133952/93‑1 (MQ=255)

                                                                            ggT‑‑GAG‑G‑GGGGGG‑‑ATTCGAGCCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTc  <  2:4074427/93‑1 (MQ=255)

TTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG‑GCGGT‑‑GA‑‑G‑GGGGGG‑‑ATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTC  >  NC_000913/1096717‑1096883

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`