Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,122,580 (A)6→7 intergenic (‑84/+50) yceB ← / ← grxB hypothetical protein/glutaredoxin 2

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,122,5741.A99.0% 726.4 / ‑1.2 200intergenic (‑78/+56)yceB/grxBhypothetical protein/glutaredoxin 2
Reads supporting (aligned to +/- strand):  ref base . (1/1);  new base A (94/104);  total (95/105)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01

Only 100 of 237 total aligned reads displayed.

TAAAAACTTGTTCATGGTAGTCCTCGACATGAAATCTGCGTCAATATCCTGACACAACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAATTGATTT  >  NC_000913/1122482‑1122661
                                                                                             |                                                                                       
tAAAAACTTGTTCATGGTAGTCCTCGACATGAAATCTGCGTCAATATCCTGACACAACGCAGCATGTGTCACCAGCGATAAACTCGCcagcag                                                                                          >  2:1589244/1‑93 (MQ=255)
tAAAAACTTGTTCATGGTAGTCCTCGACATGAAATCTGCGTCAATATCCTGACACAACGCAGCATGTGTCACCAGCGATAAACTCGCcagcag                                                                                          >  1:1684057/1‑93 (MQ=255)
 aaaaaCTTGTTCATGGTAGTCCTCGACATGAAATCTGCGTCAATATCCTGACACAACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGa                                                                                        >  2:903846/1‑93 (MQ=255)
       ttGTTCATGGTAGACCTCGACATGAAATCTGCGTCAATATCCTGACACAACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGaaaaaaa                                                                                  <  1:830310/93‑2 (MQ=255)
         gTTCATGGTAGTCCTCGACATGAAATCTGCTTCAATATCCTGACACAACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGaaaaaaact                                                                                <  1:1614166/93‑4 (MQ=255)
         gTTCATGGTAGTCCTCGACATGAAATCTGCGTCAATATCCTGACACAACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGaaaaaaact                                                                                <  2:643001/93‑4 (MQ=255)
          ttCATGGTAGTCCTCGACATGAAATCTGCGTCAATATCCTGACACAACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGaaaaaaactg                                                                               <  2:3864308/93‑5 (MQ=255)
          ttCATGGTAGTCCTCGACATGAAATCTGCGTCAATATCCTGACACAACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGaaaaaaacta                                                                               >  1:3816510/1‑89 (MQ=255)
            cATGGTAGTCCTCGACATGAAATCTGCGTCAATATCCTGACACAACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGaa                                                                              <  1:1253423/93‑1 (MQ=255)
             aTGGTAGTCCTCGACATGAAATCTGCGTCAATATCCTGACACAACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGaaa                                                                             <  2:6789239/93‑1 (MQ=255)
             aTGGTAGTCCTCGACATGAAATCTGCGTCAATATCCTGACACAACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGaaa                                                                             >  1:7912225/1‑93 (MQ=255)
             aTGGTAGTCCTCGACATGAAATCTGCGTCAATATCCTGACACAACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGaaa                                                                             <  1:3573354/93‑1 (MQ=255)
              tGGTAGTCCTCGACATGAAATCTGCGTCAATATCCTGACACAACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGaaaa                                                                            >  1:7570749/1‑93 (MQ=255)
              tGGTAGTCCTCGACATGAAATCTGCGTCAATATCCTGACACAACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGaaaa                                                                            >  1:5186759/1‑93 (MQ=255)
              tGGTAGTCCTCGACATGAAATCTGCGTCAATATCCTGACACAACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGaaaa                                                                            >  2:6232875/1‑93 (MQ=255)
              tGGTAGTCCTCGACATGAAATCTGCGTCAATATCCTGACACAACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGaaaa                                                                            >  1:881460/1‑93 (MQ=255)
              tGGTAGTCCTCGACATGAAATCTGCGTCAATATCCTGACACAACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGaaaa                                                                            <  2:373045/93‑1 (MQ=255)
              tGGTAGTCCTCGACATGAAATCTGCGTCAATATCCTGACACAACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGaaaa                                                                            <  2:2471797/93‑1 (MQ=255)
               ggTAGTCCTCGACATGAAATCTGCGTCAATATCCTGACACAACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGAAAAc                                                                           >  2:1544460/1‑93 (MQ=255)
                gTAGTCCTCGACATGAAATCTGCGTCAATATCCTGACACAACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGAAAAcg                                                                          <  2:523898/93‑1 (MQ=255)
                 tAGTCCTCGACATGAAATCTGCGTCAATATCCTGACACAACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGAAAAcgg                                                                         <  1:6223104/93‑1 (MQ=255)
                  aGTCCTCGACATGAAATCTGCGTCAATATCCTGACACAACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGAAAAcggc                                                                        <  1:2460206/93‑1 (MQ=255)
                  aGTCCTCGACATGAAATCTGCGTCAATATCCTGACACAACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGAAAAcggc                                                                        >  2:7329518/1‑93 (MQ=255)
                   gTCCTCGACATGAAATCTGCGTCAATATCCTGACACAACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGAAAAcggcg                                                                       >  1:7150881/1‑93 (MQ=255)
                    tCCTCGACATGAAATCTGCGTCAATATCCTGACACAACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGAAAAcggcgg                                                                      >  1:6776566/1‑93 (MQ=255)
                    tCCTCGACATGAAATCTGCGTCAATATCCTGACACAACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGAAAAcggagg                                                                      >  1:2376849/1‑93 (MQ=255)
                     ccTCGACATGAAATCTGCGTCAATATCCTGACACAACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGAAAACggcggc                                                                     <  2:3486253/93‑1 (MQ=255)
                      cTCGACATGAAATCTGCGTCAATATCCTGACACAACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGAAAACGGCGGCa                                                                    <  2:1409733/93‑1 (MQ=255)
                       tCGACATGAAATCTGCGTCAATATCCTGACACAACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGAAAACGGCGGCaa                                                                   >  1:4149830/1‑93 (MQ=255)
                       tCGACATGAAATCTGCGTCAATATCCTGACACAACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGAAAACGGCGGCaa                                                                   >  1:1414856/1‑93 (MQ=255)
                        cGACATGAAATCTGCGTCAATATCCTGACACAACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGAAAACGGCGGCAAc                                                                  <  2:2124437/93‑1 (MQ=255)
                          aCATGAAATCTGCGTCAATATCCTGACACAACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGAAAACGGCGGCAAccc                                                                <  2:573991/93‑1 (MQ=255)
                           cATGAAATCTGCGTCAATATCCTGACACAACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGAAAACGGCGGCAACCcg                                                               >  2:3089087/1‑93 (MQ=255)
                           cATGAAATCTGCGTCAATATCCTGACACAACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGAAAACGGCGGCAACCcg                                                               >  1:7394980/1‑93 (MQ=255)
                            aTGAAATCTGCGTCAATATCCTGACACAACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGAAAACGGCGGCAAGCcgc                                                              >  1:3460026/1‑93 (MQ=255)
                            aTGAAATCTGCGTCAATATCCTGACACAACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGAAAACGGCGGCAACCcgc                                                              <  1:1088231/93‑1 (MQ=255)
                            aTGAAATCTGCGTCAATATCCTGACACAACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGAAAACGGCGGCAACCcgc                                                              >  1:6067458/1‑93 (MQ=255)
                             tGAAATCTGCGTCAATATCCTGACACAACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGAAAACGGCGGCACCCcgcg                                                             >  1:3657051/1‑93 (MQ=255)
                             tGAAATCTGCGTCAATATCCTGACACAACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGAAAACGGCGGCAACCcgcg                                                             <  1:263195/93‑1 (MQ=255)
                             tGAAATCTGCGTCAATATCCTGACACAACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGAAAACGGCGGCAAACcgcg                                                             >  1:3195106/1‑93 (MQ=255)
                             tGAAATCTGCGTCAATATCCTGACACAACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGAAAAAGGCGGCAACCcgcg                                                             >  2:1957801/1‑93 (MQ=255)
                               aaaTCTGCGTCAATATCCTGACACAACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGAAAACGGCGGCAACCCGCGaa                                                           <  1:6412988/93‑1 (MQ=255)
                                 aTCTGCGTCAATATCCTGACACAACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAAACGGAAAACGGCGGCAACCCGCGAATa                                                         <  2:7588570/93‑1 (MQ=255)
                                  tCTGCGTCAATATCCTGACACAACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGAAAACGGCGGCAACCCGCGAATAc                                                        <  2:1450699/93‑1 (MQ=255)
                                  tCTGCGTCAATATCCTGACACAACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGAAAACGGCGGCAACCCGCGAATAc                                                        >  2:4428554/1‑93 (MQ=255)
                                    tGCGTCAATATCCTGACACAACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGAAAACGGCGGCAACCCGCGAATACAg                                                      <  2:2297566/93‑1 (MQ=255)
                                    tGCGTCAATATCCTGACACAACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGAAAACGGCGGCAACCCGCGAATACAg                                                      <  1:1595405/93‑1 (MQ=255)
                                    tGCGTCAATATCCTGACACAACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGAAAACGGCGGCAACCCGCGAATACAg                                                      <  2:5310848/93‑1 (MQ=255)
                                     gCGTCAATATCCTGACACAACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGAAAACGGCGGCAACCCGCGAATACAgg                                                     >  1:7648624/1‑93 (MQ=255)
                                      cGTCAATATCCTGACACAACGCAGCATGAGTCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGc                                                    <  2:3214179/93‑1 (MQ=255)
                                      cGTCAATATCCTGACACAACGCAGCATATGTCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGc                                                    <  2:3386268/93‑1 (MQ=255)
                                       gTCAATATCCTGACACAACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCt                                                   <  1:993908/93‑1 (MQ=255)
                                       gTCAATATCCTGACACAACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCt                                                   <  2:7088625/93‑1 (MQ=255)
                                        tCAATATCCTGACACAACGCCGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGAAAACGGCGGCAACCCCCGAATACAGGcag                                                  >  1:483345/1‑91 (MQ=255)
                                        tCAATATCCTGACACAACGCAGCATGTGTCCCCAGCGATAATCTCGCCAGCAGAAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTg                                                  <  1:7505126/93‑1 (MQ=255)
                                           atatCCTGACACAACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCcg                                               >  1:1555129/1‑93 (MQ=255)
                                            tatCCTGACACAACGCAGCATGTGTCACCAGCGGTAAACTCGCCGGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACCGGCTGCcccg                                             >  1:5363164/1‑93 (MQ=255)
                                            tatCCTGACACAACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCcgc                                              >  2:3651140/1‑93 (MQ=255)
                                              tCCTGACACAACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCgcgg                                            >  2:5271882/1‑93 (MQ=255)
                                              tCCTGACACAACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCgcgg                                            >  1:2820012/1‑93 (MQ=255)
                                               ccTGACACAACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCgcggc                                           <  1:5644709/93‑1 (MQ=255)
                                                cTGACACAACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCgcggcg                                          >  1:4294421/1‑93 (MQ=255)
                                                  gACACAACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCggg                                        >  2:6970146/1‑93 (MQ=255)
                                                   acacAACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCgggg                                       >  1:3767675/1‑92 (MQ=255)
                                                    cacaACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTc                                      <  2:357091/93‑1 (MQ=255)
                                                    cacaACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTc                                      <  1:7740920/93‑1 (MQ=255)
                                                        aCGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGa                                  <  1:1829490/93‑1 (MQ=255)
                                                        aCGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGAAAACGGCGGCAACCCGCGAATACAAGCTGGCCGGGCGGGGCAGGa                                  >  2:2779245/1‑93 (MQ=255)
                                                        aCGCAGCATGCGTCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGa                                  <  2:5842320/93‑1 (MQ=255)
                                                          gcagcaTGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGGCAGGGtt                                >  1:5721775/1‑93 (MQ=255)
                                                          gcagcaTGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGGCAGGGtt                                >  1:6939425/1‑93 (MQ=255)
                                                            agcaTGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTaa                              <  1:2871409/93‑1 (MQ=255)
                                                             gcaTGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGGCAGGATTaaa                             >  2:6401949/1‑93 (MQ=255)
                                                              caTGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAAt                            <  2:2398957/93‑1 (MQ=255)
                                                              caTGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAAt                            <  2:6856773/93‑1 (MQ=255)
                                                              caTGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAAt                            <  1:3270395/93‑1 (MQ=255)
                                                               aTGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGGTTAAATc                           >  2:5047364/1‑93 (MQ=255)
                                                                   gtCACCAGCTATAAACTCGCCAGCAGAAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCa                       <  2:7516287/93‑1 (MQ=255)
                                                                   gtCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCa                       <  1:7362567/93‑1 (MQ=255)
                                                                   gtCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCa                       >  1:3950852/1‑93 (MQ=255)
                                                                   gtCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCa                       <  1:955484/93‑1 (MQ=255)
                                                                   gtCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGGCCGGATTAAATCGCCa                       >  1:612946/1‑93 (MQ=255)
                                                                    tCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCAt                      <  1:1953501/93‑1 (MQ=255)
                                                                    tCACCAGCGATAAACTCGCCAGCAGAAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCAt                      <  1:3339105/93‑1 (MQ=255)
                                                                       ccAGCGATAAACTCGCCAGCAGAAAAAAACTGAAAACGGCGGCAGCCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATtga                   <  1:5445495/93‑1 (MQ=255)
                                                                       ccAGCGATAAACTCGCCAGCAGAAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCCTtga                   >  1:4095667/1‑93 (MQ=255)
                                                                       ccAGCGATAAACTCGCCAGCAGAAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATtga                   <  2:1511064/93‑1 (MQ=255)
                                                                       ccAGCGATAAACTCGCCAGCAGAAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGGCAGGATTAAATCGCCATtga                   >  2:5813373/1‑93 (MQ=255)
                                                                          gCGATAAACTCGCCAGCAGAAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATtgatga                <  2:1684057/93‑1 (MQ=255)
                                                                          gCGATAAACTCGCCAGCAGAAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATtgatga                <  2:4785212/93‑1 (MQ=255)
                                                                           cGATAAACTCGCCAGCAGAAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTTAAACGCCATTgatgat               >  1:3509527/1‑93 (MQ=255)
                                                                              tAAACTCGCCAGCAGAAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAAc            <  2:4076971/93‑1 (MQ=255)
                                                                              tAAACTCGCCAGCAGAAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAAc            <  1:5802878/93‑1 (MQ=255)
                                                                              tAAACTCGCCAGCAGAAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGGCAGGATTAAATTGCCCTTgatgattaa            >  1:3241416/1‑90 (MQ=255)
                                                                                  cTCGCCAGCAGAAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGGCAGGATTAAATCGCCATTGATGGTAACAAAt        >  2:1299960/1‑93 (MQ=255)
                                                                                   tCGCCAGCAGAAAAAAACTGAAAACGGCGGCAACGCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAAtt       >  2:4955753/1‑93 (MQ=255)
                                                                                      ccAGCAGAAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAATTGAt    <  2:498037/93‑1 (MQ=255)
                                                                                       cagcagaAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAATTGAtt   <  1:3885832/93‑1 (MQ=255)
                                                                                       cagcagaAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAATTGAtt   <  1:6030307/93‑1 (MQ=255)
                                                                                       cagcagaAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAATTGAtt   <  2:4494704/93‑1 (MQ=255)
                                                                                             |                                                                                       
TAAAAACTTGTTCATGGTAGTCCTCGACATGAAATCTGCGTCAATATCCTGACACAACGCAGCATGTGTCACCAGCGATAAACTCGCCAGCAGAAAAAACTGAAAACGGCGGCAACCCGCGAATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAATTGATTT  >  NC_000913/1122482‑1122661

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: