BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,008,480	+A	coding (637/654 nt)	yedK →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,008,476	1	.	A	99.0%	708.3 / ‑1.7	196	coding (633/654 nt)	yedK	hypothetical protein
Reads supporting (aligned to +/- strand): ref base . (1/1); new base A (90/104); total (91/105)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 223 total aligned reads displayed.

AGCGGTAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTT‑AAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTA  >  NC_000913/2008384‑2008563

aGCGGTAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑Gtt                                                                                          <  2:377657/93‑1 (MQ=255)

 gCGGTAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTT‑a                                                                                        >  2:1597086/1‑93 (MQ=255)

 gCGGTAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGGGGGTAAT‑GTT‑a                                                                                        >  2:2309133/1‑93 (MQ=255)

  cGGTAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTT‑aa                                                                                       <  1:1686473/93‑1 (MQ=255)

    gTAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTT‑aaaa                                                                                     >  1:4243489/1‑93 (MQ=255)

    gTAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTT‑aaaa                                                                                     >  1:7877913/1‑93 (MQ=255)

    gTAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTT‑aaaa                                                                                     <  1:4487410/93‑1 (MQ=255)

     tAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTT‑aaaaa                                                                                    <  1:7367234/93‑2 (MQ=255)

     tAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTT‑aaaaa                                                                                    <  1:4090806/93‑2 (MQ=255)

     tAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTT‑aaaaa                                                                                    <  1:5829730/93‑2 (MQ=255)

       aagaagCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTT‑aaaaacc                                                                                  <  1:4140573/93‑4 (MQ=255)

          aagCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAgg                                                                                >  2:5695586/1‑93 (MQ=255)

           agCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAggg                                                                               >  1:975423/1‑93 (MQ=255)

            gCCTCAGAAATCGCGGCCAGCGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGgc                                                                              >  2:7605669/1‑93 (MQ=255)

              cTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGgcgc                                                                            <  2:5086405/93‑1 (MQ=255)

              cTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGgcgc                                                                            >  1:306027/1‑93 (MQ=255)

              cTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGgcgc                                                                            <  1:6863016/93‑1 (MQ=255)

               tCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGcgcg                                                                           >  1:3433497/1‑93 (MQ=255)

               tCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGcgcg                                                                           <  2:5993254/93‑1 (MQ=255)

                 aGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGa                                                                         >  2:3798504/1‑93 (MQ=255)

                 aGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGa                                                                         <  1:6008020/93‑1 (MQ=255)

                 aGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGa                                                                         <  1:6510277/93‑1 (MQ=255)

                  gAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTACCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAg                                                                        <  2:5386575/93‑1 (MQ=255)

                   aaaTCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGt                                                                       <  1:4769348/93‑1 (MQ=255)

                   aaaTCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGt                                                                       <  1:7559997/93‑1 (MQ=255)

                     aTCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTa                                                                     >  1:5703048/1‑93 (MQ=255)

                       cgcgGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAAt                                                                   <  2:4254540/93‑1 (MQ=255)

                       cgcgGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAAt                                                                   <  1:3247640/93‑1 (MQ=255)

                        gcgGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAAtt                                                                  >  1:1093314/1‑93 (MQ=255)

                        gcgGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAAtt                                                                  >  2:2064289/1‑93 (MQ=255)

                         cgGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTc                                                                 <  1:6156893/93‑1 (MQ=255)

                          ggCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCa                                                                >  1:7205098/1‑93 (MQ=255)

                          ggCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCa                                                                >  2:6831698/1‑93 (MQ=255)

                           gCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCaa                                                               >  2:1394311/1‑93 (MQ=255)

                           gCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCaa                                                               <  2:1326220/93‑1 (MQ=255)

                            ccAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAAc                                                              <  1:3958686/93‑1 (MQ=255)

                             cAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAAcc                                                             <  2:2177440/93‑1 (MQ=255)

                             cAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAAcc                                                             >  2:7680228/1‑93 (MQ=255)

                              aGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCt                                                            >  1:2435795/1‑93 (MQ=255)

                              aGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCt                                                            <  1:59189/93‑1 (MQ=255)

                              aGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGCATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAAccg                                                            >  2:4546254/1‑92 (MQ=255)

                               gTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTg                                                           >  2:1640723/1‑93 (MQ=255)

                               gTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTg                                                           >  2:7369032/1‑93 (MQ=255)

                                  gCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGttt                                                        >  2:4751464/1‑93 (MQ=255)

                                  gCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGttt                                                        >  1:1068340/1‑93 (MQ=255)

                                   cTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTg                                                       >  2:5919993/1‑93 (MQ=255)

                                    tgtgTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGa                                                      >  2:6948094/1‑93 (MQ=255)

                                    tgtgTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGa                                                      <  1:4986424/93‑1 (MQ=255)

                                    tgtgTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGa                                                      >  2:2427616/1‑93 (MQ=255)

                                     gtgtTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGAt                                                     <  2:1527513/93‑1 (MQ=255)

                                      tgtTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATa                                                    <  2:1470354/93‑1 (MQ=255)

                                       gtTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATaa                                                   <  1:6304972/93‑1 (MQ=255)

                                          tcAGGAACCCAGGTCTCCTGGCCGCCGGTAACGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGcc                                                <  1:1208818/92‑1 (MQ=255)

                                          ccAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGcc                                                <  1:2932070/93‑1 (MQ=255)

                                           cAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCt                                               <  1:754122/93‑1 (MQ=255)

                                           cAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGAGCGGAGTTAATTCAACCTGTTTGATAAGCCt                                               <  2:3753787/93‑1 (MQ=255)

                                             gCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTgg                                             <  2:1226513/93‑1 (MQ=255)

                                             gCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTgg                                             >  2:541979/1‑93 (MQ=255)

                                              gaaaCCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGga                                            <  1:5770771/92‑1 (MQ=255)

                                               aaaCCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGgag                                           >  2:7201753/1‑93 (MQ=255)

                                                aaCCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGgaga                                          >  1:7807090/1‑93 (MQ=255)

                                                 aCCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGat                                         >  1:6676510/1‑93 (MQ=255)

                                                    aGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGattat                                      <  1:4382348/93‑1 (MQ=255)

                                                       tctcCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGa                                   <  2:6970607/93‑1 (MQ=255)

                                                        ctcCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGAt                                  <  1:4345477/93‑1 (MQ=255)

                                                        ctcCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGAt                                  <  1:5873814/93‑1 (MQ=255)

                                                         tcCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATc                                 <  2:4846739/93‑1 (MQ=255)

                                                          ccTGGCACGCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATca                                <  2:3088733/93‑1 (MQ=255)

                                                             ggCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATcaaca                             >  2:7504990/1‑93 (MQ=255)

                                                              gCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATcaacaa                            >  1:6265383/1‑93 (MQ=255)

                                                                ccccGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCACCCTGTTTGATAAGCCTGGAGATTATTGATCAACAATa                          <  2:649071/92‑1 (MQ=255)

                                                                aCCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATa                          <  1:3033910/93‑1 (MQ=255)

                                                                aCCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATAAACAATa                          <  1:944470/93‑1 (MQ=255)

                                                                   cGGTATCGCGCGCGGTGGGTAATGGTA‑AAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTg                       >  2:3734380/1‑93 (MQ=255)

                                                                   cGGTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTg                       >  1:5114315/1‑93 (MQ=255)

                                                                    ggTATCGCGCGCGGTGTGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGc                      <  2:1393184/93‑1 (MQ=255)

                                                                    ggTATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGc                      <  1:1897584/93‑1 (MQ=255)

                                                                      tATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGt                    <  1:673993/93‑1 (MQ=255)

                                                                      tATCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGt                    <  2:4684258/93‑1 (MQ=255)

                                                                       aTCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTc                   >  2:5333230/1‑93 (MQ=255)

                                                                       aTCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTc                   <  1:2131675/93‑1 (MQ=255)

                                                                        tCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCa                  >  2:5158428/1‑93 (MQ=255)

                                                                        tCGCGCGCGGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCa                  <  1:5574642/93‑1 (MQ=255)

                                                                         cgcgcgcgGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCAt                 <  2:3482365/93‑1 (MQ=255)

                                                                              gcgGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGaa            <  1:7647718/93‑1 (MQ=255)

                                                                               cgGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTGAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGaaa           <  1:6331426/93‑1 (MQ=255)

                                                                               cgGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGaaa           >  2:3909558/1‑93 (MQ=255)

                                                                               cgGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGaaa           <  1:6051861/93‑1 (MQ=255)

                                                                               cgGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGaaa           <  2:1890617/93‑1 (MQ=255)

                                                                               cgGTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGaaa           <  1:5535248/93‑1 (MQ=255)

                                                                               cgGTGGATAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGaaa           <  1:5261252/93‑1 (MQ=255)

                                                                                 gTGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAAtc         <  2:6226784/93‑1 (MQ=255)

                                                                                  tGGGTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAAtct        >  1:3167439/1‑93 (MQ=255)

                                                                                   gggTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAAtctc       <  1:3808344/93‑1 (MQ=255)

                                                                                   gggTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAAtctc       <  1:4519293/93‑1 (MQ=255)

                                                                                    ggTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATctct      >  1:1254368/1‑93 (MQ=255)

                                                                                     gTAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAACAAATctctt     >  1:2627946/1‑92 (MQ=255)

                                                                                      tAAT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTAt    >  1:1008697/1‑93 (MQ=255)

                                                                                       aaT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTAtt   <  1:1802262/93‑1 (MQ=255)

                                                                                        aT‑GTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTa  >  1:4327118/1‑93 (MQ=255)

AGCGGTAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTT‑AAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTA  >  NC_000913/2008384‑2008563

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`