Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,418,528 (G)5→6 intergenic (‑23/‑113) yfcF ← / → yfcG hypothetical protein/putative S‑transferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,418,5231.G98.9% 562.5 / ‑1.2 178intergenic (‑18/‑118)yfcF/yfcGhypothetical protein/putative S‑transferase
Reads supporting (aligned to +/- strand):  ref base . (2/0);  new base G (88/88);  total (90/88)
Fisher's exact test for biased strand distribution p-value = 4.97e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.91e-01

Only 100 of 212 total aligned reads displayed.

CGCCACCCAGGCGGATAACACATAAGGGGAGAAAAAGTGGGCATCTGACCAAAGCGTGATAGCGGGTTTACTCATTATGTCCTCGGCAATAA‑‑A‑‑GGGGGCTGGCTATCAAACTATAGAGCCTTTTTGTCACTGTCACGTGACGAATACTCACGTAAGTCGCCGCGCTTTCTATACTTGTGGT  >  NC_000913/2418431‑2418611
                                                                                               |                                                                                         
cGCCACCCAGGCGGATAACACATAAGGGGAGAAAAAGTGGGCATCTGACCAAAGCGTGATAGCGGGTTTACTCATTATGTCCTCGGCAATaa‑‑a                                                                                            <  2:6891578/93‑1 (MQ=255)
cGCCACCCAGGCGGATAACACATAAGGGGAGAAAAAGTGGGCATCTGACCAAAGCGTGATAGCGGGTTTACTCATTATGTCCTCGGCAATaa‑‑a                                                                                            <  1:7795042/93‑1 (MQ=255)
 gCCACCCAGGCGGATAACACATAAGGGGAGAAAAAGTGGGCATCTGACCAAAGCGTGATAGCGGGTTTACTCATTATGTCCTCGGCAATAA‑‑A‑‑g                                                                                         <  2:3895756/93‑1 (MQ=255)
 gCCACCCAGGCGGATAACACATAAGGGGAGAAAAAGTGGGCATCTGACCAAAGCGTGATAGCGGGTTTACTCATCATGTCCTCGGCAATAA‑‑A‑‑g                                                                                         <  2:7775425/93‑1 (MQ=255)
  ccACCCAGGCGGATAACACATAAGGGGAGAAAAAGTGGGCATCTGACCAAAGCGTGATAGCGGGTTTACTCATTATGTCCTCGGCAATAA‑‑A‑‑gg                                                                                        <  1:5119086/93‑1 (MQ=255)
  ccACCCAGGCGGATAACACATAAGGGGAGAAAAAGTGGGCATCTGACCAAAGCGTGATAGCGGGTTTACTCATTATGTCCTCGGCAATAA‑‑A‑‑gg                                                                                        <  1:5622233/93‑1 (MQ=255)
   cACCCAGGCGGATAACACATAAGGGGAGAAAAAGTTGGCATCTGACCAAAGCGTGATAGCGGGTTTTCTCATTATGTCCTCGGCAATAA‑‑A‑‑ggg                                                                                       <  1:7458098/93‑1 (MQ=255)
    aCCCAGGCGGATAACACATAAGGGGAGAAAAAGTGGGCATCTGACCAAAGCGTGATAGCGGGTTTACTCATTATGTCCTCGGCAATAA‑‑A‑‑gggg                                                                                      <  2:5536537/93‑1 (MQ=255)
     cccAGGGGGATAACACATAAGGGGAGAAAAAGTGGGCATCTGACCAAAGCGCGATAGCGGGTTTACTCATTATGTCCTCGGCAATAA‑‑A‑‑ggggg                                                                                     >  2:5298490/1‑93 (MQ=255)
     cccAGGCGGATAACACATAAGGGGAGAAAAAGTGGGCATCTGACCAAAGCGTGATAGCGGGTTTACTCATTATGTCCTCGGCAATAA‑‑A‑‑ggggg                                                                                     <  1:2851917/93‑1 (MQ=255)
     cccAGGCGGATAACACATAAGGGGAGAAAAAGTGGGCATCTGACCAAAGCGTGATAGCGGGTTTACTCATTATGTCCTCGGCAATAA‑‑A‑‑ggggg                                                                                     <  1:7392041/93‑1 (MQ=255)
     cccAGGCGGATAACACATAAGGGGAGAAAAAGTGGGCATCTGACCAAAGCGTGATAGCGGGTTTACTCATTATGTCCTCGGCAATAA‑‑A‑‑ggggg                                                                                     <  1:5189269/93‑1 (MQ=255)
     cccAGGCGGATAACACATAAGGGGAGAAAAAGTGGGCATCTGACCAAAGCGTGATAGCGGGTTTACTCATTATGTCCTCGGCAATAA‑‑A‑‑ggggg                                                                                     <  2:2230072/93‑1 (MQ=255)
     cccAGGCGGATAACACATAAGGGGAGAAAAAGTGGGCATCTGACCAAAGCGTGATAGCGGGTTTACTCATTATGTCCTCGGCAATAA‑‑A‑‑ggggg                                                                                     >  2:3884001/1‑93 (MQ=255)
      ccAGGCGGATAACACATAAGGGGAGAAAAAGTGGGCATCTGACCAAAGCGTGATAGCGGGTTTACTCATTATGTCCTCGGCAATAA‑‑A‑‑gggggg                                                                                    <  1:3809556/93‑2 (MQ=255)
       cAGGCGGATAACACATAAGGGGAGAAAAAGTGGGCATCTGACCAATGCGTGATAGCGGGTTTACTCATTATGTCCTCGGCAATAA‑‑A‑‑ggggggc                                                                                   <  1:929885/93‑3 (MQ=255)
         ggCGGATAACACATAAGGGGAGAAAAAGTGGGCATCTGACCAAAGCGTGATAGCGGGTTTACTCATTATGTCCTCGGCAATAA‑‑A‑‑ggggggctg                                                                                 >  1:5210304/1‑89 (MQ=255)
         ggCGGATAACACATAAGGGGAGAAAAAGTGGGCATCTGACCAAAGCGTGATAGCGGGTTTACTCATTATGTCCTCGGCAATAA‑‑A‑‑ggggggctg                                                                                 >  1:5736888/1‑89 (MQ=255)
               tAACACATAAGGGGAGAAAAAGTGGGCATCTGACCAAAGCGTGATAGCGGGTTTACTCATTATGTCCTCGGCAATAA‑‑AGGGGGGCTGGCTATc                                                                            >  2:4535703/1‑93 (MQ=255)
               tAACACATAAGGGGAGAAAAAGTGGGCATCTGACCAAAGCGTGATAGCGGGTTTACTCATTATGTCCTCGGCAATAA‑‑AGGGGGGCTGGCTATc                                                                            >  2:142109/1‑93 (MQ=255)
                 acacATAAGGGGAGAAAAAGTGGGCATCTGACCAAAGCGTGATAGCGGGTTTACTCATTATGTCCTCGGCAATAA‑‑AGGGGGGCTGGCTATCaa                                                                          <  2:6613395/93‑1 (MQ=255)
                   acaTAAGGGGAGAAAAAGTGGGCATCTGACCAAAGCGTGATAGCGGGTTTACTCATTATGTCCTCGGCAATAA‑‑AGGGGGGCTGGCTATCAAAc                                                                        <  1:5916548/93‑1 (MQ=255)
                   acaTAAGGGGAGAAAAAGTGGGCATCTGACCAAAGCGTGATAGCGGGTTTACTCATTATGTCCTCGGCAATAA‑‑AGGGGGGCTGGCTATCAAAc                                                                        >  1:343934/1‑93 (MQ=255)
                     aTAAGGGGAGAAAAAGTGGGCATCTGACCAAAGCGTGATAGCGGGTTTACTCATTATGTCCTCGGCAATAA‑‑AGGGGGGGCTGGCTATCAAACt                                                                       <  1:1006379/93‑1 (MQ=255)
                     aTAAGGGGAGAAAAAGTGGGCATCTGACCAAAGCGTGATAGCGGGTTTACTCATTATGTCCTCGGCAATAA‑‑AGGGGGGCTGGCTATCAAACta                                                                      >  2:5004955/1‑93 (MQ=255)
                     aTAAGGGGAGAAAAAGTGGGCATCTGACCAAAGCGTGATAGCGGGGTTACTCATTATGTCCTCGGCAATAA‑‑AGGGGGGCTGGCTATCAAACta                                                                      >  2:7040618/1‑93 (MQ=255)
                      tAAGGGGAGAAAAAGTGGGCATCTGACCAAAGCGTGATAGCGGGTTTACTCATTATGTCCTCGGCAATAA‑‑AGGGGGGCTGGCTATCAAACtat                                                                     >  1:2932757/1‑93 (MQ=255)
                       aaGGGGAGAAAAAGTGGGCATCTGACCAAAGCGTGATAGCGGGTTTACTCATTATGTCCTCGGCAATAA‑‑AGGGGGGCTGGCTATCAAACtata                                                                    <  1:7901049/93‑1 (MQ=255)
                        aGGGGAGAAAAAGTGGGCATCTGACCAAAGCGTGATAGCGGGTTTACTCATTATGTCCTCGGCAATAA‑‑AGGGGGGCTGGCTATCACACTATag                                                                   >  1:3827493/1‑93 (MQ=255)
                         ggggAGAAAAAGTGGGCATCTGACCAAAGCGTGATAGCGGGTTTACTCATTATGTCCTCGGCAATAA‑‑AGGGGGGCTGGCTATCAAACTATaga                                                                  <  1:6717909/93‑1 (MQ=255)
                          gggAGAAAAAGTGGGCATCTGACCAAAGCGTGATAGCGGGTTTACTCATTATGTCCTCGGCAATAA‑‑AGGGGGGGCTGGCTATCAAACTATaga                                                                  <  2:3778113/93‑1 (MQ=255)
                          gggAGAAAAAGTGGGCATCTGACCAAAGCGTGATAGCGGGTTTACTCATTATGTCCTCGGCAATAA‑‑AGGGGGGGCTGGCTATCAAACTATaga                                                                  <  2:4395868/93‑1 (MQ=255)
                          gggAGAAAAAGTGGGCATCTGACCAAAGCGTGATAGCGGGTTTACTCACTATGTCCTCGGCAATAA‑‑AGGGGGGCTGGCTATCAAACTATagag                                                                 >  1:4523966/1‑93 (MQ=255)
                            gagaAAAAGTGGGCATCTGACCAAAGCGTGATAGCGGGTTTACTCATTATGTCCTCGGCAATAA‑‑AGGGGGGCTGGCTATCAAACTATAGAGcc                                                               <  2:6266314/93‑1 (MQ=255)
                              gaAAAAGTGGGCATCTGACCAAAGCGTGATAGCGGGTTTACTCATTATGTCCTCGGCAATAACGG‑‑GGGGGCTGGCTATCAAACTATAGAGCCt                                                              >  2:7731525/1‑93 (MQ=255)
                              gaAAAAGTGGGCATCTGACCAAAGCGTGATAGCGGGTTTACTCATTATGTCCTCGGCAATAA‑‑AGGGGGGCTGGCTATCAAACTATAGAGCCtt                                                             >  2:6296099/1‑93 (MQ=255)
                               aaaaaGTGGGCATCTGACCAAAGCGTGATAGCGGGTTTACTCATTATGTCCTCGGCAATAA‑‑AGGGGGGCTGGCTATCAAACTATAGAGCCttt                                                            >  1:2443719/1‑93 (MQ=255)
                                aaaaGTGGGCATCTGACCAAAGCGTGATAGCGGGTTTACTCATTATGTCCTCGGCAATAA‑‑AGGGGGGCTGGCTATCAAACTATAGAGCCtttt                                                           <  2:338358/93‑1 (MQ=255)
                                 aaaGTGGGCATCTGACCAAAGCGTGATAGCGGGTTTACTCATTATGTCCTCGGCAATAA‑‑AGGGGGGCTGGCTATCAAACTATAGAGCCttttt                                                          <  2:2974911/93‑1 (MQ=255)
                                  aaGTGGGCATCTGACCAAAGCGTGATAGCGGGTATACTCATTATGTCCTCGGCAATAA‑‑AGGGGGGCTGGCTATCAAACTATAGAGCCTTTTtg                                                         <  1:7645790/93‑1 (MQ=255)
                                      gggCATCTGACCAAAGCGTGATAGCGGGTTTACTCATTATGTCCTCGGCAATAA‑‑AGGGGGGGCTGGCTATCAAACTATAGAGCCTTTTtgtca                                                      <  1:7300671/93‑1 (MQ=255)
                                      gggCATCTGACCAAAGCGTGATAGCGGGTTTACTCATTATGTCCTCGGCAATAA‑‑AGGGGGGCTGGCTATCAAACTATAGAGCCTTTTtgtcac                                                     >  1:6964204/1‑93 (MQ=255)
                                       ggCATCTGACCAAAGCGTGATAGCGGGTTTACTCATTATGTCCTCGGCAATAA‑‑AGGGGGGCTGGCTATCAAACTATAGAGCCTTTTtgtcact                                                    <  2:2697738/93‑1 (MQ=255)
                                        gCATCTGACCAAAGCGTGATAGCGGGTTTACTCATTATGTCCTCGGCAATAA‑‑AGGGGGGCTGGCTATCAAACTATAGAGCCTTTTtgtcactg                                                   <  2:3529231/93‑1 (MQ=255)
                                        gCATCTGACCAAAGCGTGATAGCGGGTTTACTCATTATGTCCTCGGCAATAA‑‑AGGGGGGCTGGCTATCAAACTATAGAGCCTTTTtgtcactg                                                   >  2:7447766/1‑93 (MQ=255)
                                         cATCTGACCAAAGCGTGATAGCGGGTTTACTCATTATGTCCTCGGCAATAA‑‑AGGGGGGCTGGCTATCAAACTATAGAGCCTTTTtgtcactgt                                                  >  2:2663041/1‑93 (MQ=255)
                                         cATCTGACCAAAGCGTGATAGCGGATTTACTCATTATGTCCTCGGCAATAA‑‑AGGGGGGCTGGCTATCAAACTATAGAGCCTTTTtgtcactgt                                                  <  2:4159833/93‑1 (MQ=255)
                                           tCTGACCAAAGCGTGATAGCGGGTTTACTCATTATGTCCTCGGCAATAA‑‑AGGGGGGGCTGGCTATCAAACTATAGAGCCTTTTtgtcactgtc                                                 >  2:7889581/1‑93 (MQ=255)
                                           tCTGACCAAAGCGTGATAGCGGGTTTACTCATTATGTCCTCGGCAATAA‑‑AGGGGGGCTGGCTATCAAACTATAGAGCCTTTTtgtcactgtca                                                >  2:6550168/1‑93 (MQ=255)
                                           tCTGACCAAAGCGTGATAGCGGGTTTACTCATTATGTCCTCGGCAATAA‑‑AGGGGGGCTGGCTATCAAACTATAGAGCCTTTTtgtcactgtca                                                <  2:37970/93‑1 (MQ=255)
                                           tCTGACCAAAGCGTGATAGCGGGTTTACTCATTATGTCCTCGGCAATAA‑‑AGGGGGGCTGGCTATCAAACTATAGAGCCTTTTtgtcactgtca                                                >  1:4458512/1‑93 (MQ=255)
                                            cTGACCAAAGCGTGATAGCGGGTTTACTCATTATGTCCTCGGCAATAA‑‑AGGGGGGCTGGCTATCAAACTATAGAGCCTTTTtgtcactgtcac                                               <  1:2633769/93‑1 (MQ=255)
                                             tGACCAAAGCGTGATAGCGGGTTTACTCATTATGTCCTCGGCAATAA‑‑AGGGGGGCTGGCTATCAAACTATAGAGCCTTTTTGTCACTGTCACg                                              >  1:5124396/1‑93 (MQ=255)
                                                 cAAAGCGTGATAGCGGGTTTACTCATTATGTCCTCGGCAATAA‑‑AGGGGGGCTGGCTATCAAACTATAGAGCCTTTTTGTCACTGTCACGTGAc                                          >  1:4652050/1‑93 (MQ=255)
                                                 cAAAGCGTGATAGCGGGTTCACTCATTATGTCCTCGGCAATAA‑‑AGGGGGGCTGGCTATCAAACTATAGAGCCTTTTTGTCACTGTCACGTGAc                                          <  1:7694196/93‑1 (MQ=255)
                                                  aaaGCGTGATAGCGGGTTTACTCATTATGTCCTCGGCAATAA‑‑AGGGGGGCTGGCTATCAAACTATAGAGCCTTTTTGTCACTGTCACGTGACg                                         >  2:1183868/1‑93 (MQ=255)
                                                  aaaGCGTGATAGCGGGTTTACTCATTATGTCCTCGGCAATAA‑‑AGGGGGGCTGGCTATCAAACTATAGAGCCTTTTTGTCACTGTCACGTGACg                                         >  1:2603307/1‑93 (MQ=255)
                                                   aaGCGTGATAGCGGTTTTACTCATTATGTCCTCGGCAATAA‑‑AGGGGGGCTGGCTATCAAACTATAGAGCCTTTTTGTCACTGTCACGTGACGa                                        <  2:4383424/93‑1 (MQ=255)
                                                    aGCGTGATAGCGGGTTTACTCATTATGTCCTCGGCAATAA‑‑AGGGGGGCTGGCTATCAAACTATAGAGCCTTTTTGTCACTGTCACGTGACGaa                                       <  2:1473441/93‑1 (MQ=255)
                                                      cGTGATAGCGGGTTTACTCATTATGTCCTCGGCAATAA‑‑AGGGGGGCTGGCTATCAAACTATAGAGCCTTTTTGTCACTGTCACGTGACGAATa                                     <  1:7520081/93‑1 (MQ=255)
                                                      cGTGATAGCGGGTTTACTCATTATGTCCTCGGCAATAA‑‑AGGGGGGCTGGCTATCAAACTATAGAGCCTTTTTGTCACTGTCACGTGACGAATa                                     >  1:2632357/1‑93 (MQ=255)
                                                      cGTGATAGCGGGTTTACTCATTATGTCCTCGGCAATAA‑‑AGGGGGGCTGGCTATCAAACTATAGAGCCTTTTTGTCACTGTCACGTGACGAATa                                     <  1:1258815/93‑1 (MQ=255)
                                                       gTGATAGCGGGTTTACTCATTATGTCCTCGGCAATAA‑‑AGGGGGGCTGGCTATCAAACTATAGAGCCTTTTTGTCACTGTCACGTGACGAATAc                                    <  2:4853866/93‑1 (MQ=255)
                                                         gATAGCGGGTTTACTCATTATGTCCTCGGCAATAA‑‑AGGGGGGCTGGCTATCAAACTATAGAGCCTTTTTGTCACTGTCACGTGACGAATACTc                                  <  1:3518648/93‑1 (MQ=255)
                                                         gATAGCGGGTTTACTCATTATGTCCTCGGCAATAA‑‑AGGGGGGCTGGCTATCAAACTATAGAGCCTTTTTGTCACTGTCACGTGACGAATACTc                                  >  1:378529/1‑93 (MQ=255)
                                                          aTAGCGGGTTTACTCATTATGTCCTCGGCAATAA‑‑AGGGGGGGCTGGCTATCAAACTATAGAGCCTTTTTGTCACTGTCACGTGACGAATACTc                                  <  2:5139028/93‑1 (MQ=255)
                                                           tAGCGGGTTTACTCATTATGTCCTCGGCAATAA‑‑AGGGGGGCTGGCTATCAAACTATAGAGCCTTTTTGTCACTGTCACGTGACGAATACTCAc                                >  1:5297169/1‑93 (MQ=255)
                                                            aGCGGGTTTACTCATTATGTCCTCGGCAATAA‑‑AGGGGGGGCTGGCTATCAAACTATAGAGCCTTTTTGTCACTGTCACGTGACGAATACTCAc                                <  2:4142330/93‑1 (MQ=255)
                                                              cGGGTTTACTCATTATGTCCTCGGCAATAA‑‑AGGGGGGCTGGCTATCAAACTATAGAGCCTTTTTGTCACTGTCACGTGACGAATACTCACGTa                             >  2:4747428/1‑93 (MQ=255)
                                                                ggTTTACTCATTATGTCCTCGGCAATAA‑‑AGGGGGGCTGGCTATCAAACTATAGAGCCTTTTTGTCACTGTCACGTGACGAATACTCACGTAAg                           <  1:6425061/93‑1 (MQ=255)
                                                                ggTTTACTCATTATGTCCTCGGCAATAA‑‑AGGGGGGCTGGCTATCAAACTATAGAGCCTTTTTGTCACTGTCACGTGACGAATACTCACGTAAg                           <  1:6535272/93‑1 (MQ=255)
                                                                ggTTTACTCATTATGTCCTCGGCAATAA‑‑AGGGGGGCTGGCTATCAAACTATAGAGCCTTTTTGTCACTGTCACGTGACGAATACTCACGTAAg                           >  2:1018596/1‑93 (MQ=255)
                                                                ggTTTACTCATTATGTCCTCGGCAATAA‑‑AGGGGGGCTGGCTATCAAACTATAGAGCCTTTTTGTCACTGTCACGTGACGAATACTCACGTAAg                           <  1:7823212/93‑1 (MQ=255)
                                                                 gTTTACTCATTATGTCCTCGGCAATAA‑‑AGGGGGGCTGGCTATCAAACTATAGAGCCTTTTTGTCACTGTCACGTGACGAATACTCACGTAAGt                          <  1:485771/93‑1 (MQ=255)
                                                                 gTTTACTCATTATGTCCTCGGCAATAA‑‑AGGGGGGCTGGCTATCAAACTATAGAGCCTTTTTGTCACTGTCACGTGACGAATACTCACGTAAGt                          <  2:2860794/93‑1 (MQ=255)
                                                                 gTTTACTCATTATGTCCTCGGCAATAA‑‑AGGGGGGCTGGCTATCAAACTATAGAGCCTTTTTGTCACTGTCACGTGACGAATACTCACGTAAGt                          <  1:2531844/93‑1 (MQ=255)
                                                                  tttACTCATTATGTCCTCGGCAATAA‑‑AGGGGGGGCTGGCTATCAAACTATAGAGCCTTTTTGTCACTGTCACGTGACGAATACTCACGTAAGt                          <  1:3211891/93‑1 (MQ=255)
                                                                  tttACTCATTATGTCCTCGGCAATAA‑‑AGGGGGGCTGGCTATCAAACTATAGAGCCTTTTTGTCACTGTCACGTGACGAATACTCACGTAAGTc                         <  1:107386/93‑1 (MQ=255)
                                                                         aTTATGTCCTCGGCAATAA‑‑AGGGGGGCTGGCTATCAAACTATAGAGCCTTTTTGTCACTGTCACGTGACGAATACTCACGTAAGTCGCCgcgc                  >  2:6386235/1‑93 (MQ=255)
                                                                          ttATGTCCTCGGCAATAA‑‑AGGGGGGGCTGGCTATCAAACTATAGAGCCTTTTTGTCACTGTCACGTGACGAATACTCACGTAAGTCGCCgcgc                  >  1:4919484/1‑93 (MQ=255)
                                                                          ttATGTCCTCGGCAATAA‑‑AGGGGGGCTGGCTATCAAACTATAGAGCCTTTTTGTCACTGTCACGTGACGAATACTCACGTAAGTCGCCGCGCt                 >  1:6074147/1‑93 (MQ=255)
                                                                          ttATGTCCTCGGCAATAA‑‑AGGGGGGCTGGCTATCAAACTATAGAGCCTTTTTGTCACTGTCACGTGACGAATACTCACGTAAGTCGCCGCGCt                 >  2:3052764/1‑93 (MQ=255)
                                                                           tATGTCCTCGGCAATAA‑‑AGGGGGGGCTGGCTATCAAACTATAGAGCCTTTTTGTCACTGTCACGTGACGAATACTCACGTAAGTCGCCGCGCt                 >  1:7104127/1‑93 (MQ=255)
                                                                           tATGTCCTCGGCAATAA‑‑AGGGGGGCTGGCTATCAAACTATAGAGCCTTTTTGTCACTGTCACGTGACGAATACTCACGTAAGTCGCCGCGCtt                >  2:6183519/1‑93 (MQ=255)
                                                                             tGTCCTCGGCAATAA‑‑AGGGGGGCTGGCTATCAAACTATAGAGCCTTTTTGTCACTGTCACGTGACGAATACTCACGTAAGTCGCCGCCCTTTc              <  2:5988085/93‑1 (MQ=255)
                                                                               tCCTCGGCAATAA‑‑AGGGGGGCTGGCTATCAAACTATAGAGCCTTTTTGTCACTGTCACGTGACGAATACTCACGTAAGTCGCCGCGCTTTCta            >  1:6825221/1‑93 (MQ=255)
                                                                                ccTCGGCAATAA‑‑AGGGGGGCTGGCTATCAAACTATAGAGCCTTTTTGTCACTGTCACGTGACGAATACTCACGTAAGTCGCCGCGCTTTCtat           <  2:3310084/93‑1 (MQ=255)
                                                                                 cTCGGCAATAA‑‑AGGGGGGGCTGGCTATCAAACTATAGAGCCTTTTTGTCACTGTCACGTGACGAATACTCACGTAAGTCGCCGCGCTTTCtat           >  2:4209141/1‑93 (MQ=255)
                                                                                  tccgCAATAA‑‑AGGGGGGCTGGCTATCAAACTATAGAGCCTTTTTGTCACTGTCACGTGACGAATACTCACGTAAGTCGCCGCGCTTTCTATAc         <  2:2469939/90‑1 (MQ=255)
                                                                                  tCGGCAATAA‑‑AGGGGGGCTGGCTATCAAACTATAGAGCCTTTTTGTCACTGTCACGTGACGAATACTCACGTAAGTCGCCGCGCTTTCTATAc         >  1:542321/1‑93 (MQ=255)
                                                                                    ggCAATAA‑‑AGGGGGGCTGGCTATCAAACTATAGAGCCTTTTTGTCACTGTCACGTGACGAATACTCACGTAAGTCGCCGCGCTTTCTATACtt       <  1:4821430/93‑1 (MQ=255)
                                                                                    ggCAATAA‑‑AGGGGGGCTGGCTATCAAACTATAGAGCCTTTTTGTCACTGTCACGTGACGAATACTCACGTAAGTCGCCGCGCTTTCTATACtt       <  1:1677640/93‑1 (MQ=255)
                                                                                     gCAATAA‑‑AGGGGGGCTGGCTATCAAACTATAGAGCCTTTTTGTCACTGTCACGTGACGAATACTCACGTAAGTCGCCGCGCTTTCTATACTtg      <  1:6889324/93‑1 (MQ=255)
                                                                                     gCAATAA‑‑AGGGGGGCTGGCTATCAAACTATAGAGCCTTTTTGTCACTGTCACGTGACGAATACTCACGTAAGTCGCCGCGCTTTCTATACTtg      <  2:7576942/93‑1 (MQ=255)
                                                                                     gCAATAA‑‑AGGGGGGCTGGCTATCAAACTATAGAGCCTTTTTGTCACTGTCACGTGACGAATACTCACGTAAGTCGCCGCGCTTTCTATACTtg      <  1:4702600/93‑1 (MQ=255)
                                                                                       aaTAA‑‑AGGGGGGCTGGCTATCAAACTATAGAGCCTTTTTGTCACTGTCACGTGACGAATACTCACGTAAGTCGCCGCGCTTTCTATACTtgtg    >  2:1563978/1‑93 (MQ=255)
                                                                                       aaTAA‑‑AGGGGGGCTGGCTATCAAACTATAGAGCCTTTTTGTCACTGTCACGTGACGAATACTCACGTAAGTCGCCGCGCTTTCTATACTtgtg    >  2:7921706/1‑93 (MQ=255)
                                                                                        aTAA‑‑AGGGGGGCTGGCTATCAAACTATAGAGCCTTTTTGTCACTGTCACGTGACGAATACTCACGTAAGTCGCCGCGCTTTCTATACTTgtgg   >  2:3080485/1‑93 (MQ=255)
                                                                                        aTAA‑‑AGGGGGGCTGGCTATCAAACTATAGAGCCTTTTTGTCACTGTCACGTGACGAATACTCACGTAAGTCGCCGCGCTTTCTATACTTgtgg   >  2:7266537/1‑93 (MQ=255)
                                                                                        aTAA‑‑AGGGGGGCTGGCTATCAAACTATAGAGCCTTTTTGTCACTGTCACGTGACGAATACTCACGTAAGTCGCCGCGCTTTCTATACTTgtgg   >  1:4350585/1‑93 (MQ=255)
                                                                                               |                                                                                         
CGCCACCCAGGCGGATAACACATAAGGGGAGAAAAAGTGGGCATCTGACCAAAGCGTGATAGCGGGTTTACTCATTATGTCCTCGGCAATAA‑‑A‑‑GGGGGCTGGCTATCAAACTATAGAGCCTTTTTGTCACTGTCACGTGACGAATACTCACGTAAGTCGCCGCGCTTTCTATACTTGTGGT  >  NC_000913/2418431‑2418611

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: