| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,501,888 | +C | coding (618/2496 nt) | b2383 ← | putative PTS system enzyme IIA component, enzyme I |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,501,884 | 1 | . | C | 98.6% | 651.5 / 1.3 | 210 | coding (622/2496 nt) | b2383 | putative PTS system enzyme IIA component, enzyme I |
| Reads supporting (aligned to +/- strand): ref base . (0/3); new base C (109/98); total (109/101) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.10e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.53e-01 | |||||||||||
Only 100 of 249 total aligned reads displayed.
AATGTCGCTAACACGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAG‑C‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGT > NC_000913/2501792‑2501971 | aTGTCGCTAACACGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAG‑c > 2:7921930/1‑93 (MQ=255) aTGTCGCTAACACGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAG‑c > 2:6399159/1‑93 (MQ=255) aTGTCGCTAACACGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAG‑c > 1:350244/1‑93 (MQ=255) tGTCGCTAACACGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAG‑c‑c < 1:819386/93‑1 (MQ=255) gTCGCTAACACGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAG‑c‑cc > 2:3123004/1‑93 (MQ=255) gTCGCTAACACGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAG‑c‑cc < 1:2898138/93‑1 (MQ=255) tCGCTAACACGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAG‑c‑ccc > 2:1175989/1‑93 (MQ=255) tCGCTAACACGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAG‑c‑ccc > 1:3347696/1‑93 (MQ=255) cGCTAACACGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAG‑c‑cccc < 2:3894108/93‑2 (MQ=255) cGCTAACACGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAG‑c‑cccc > 2:6498105/1‑92 (MQ=255) cGCTAACACGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAG‑c‑cccc > 2:7585604/1‑92 (MQ=255) tAACACGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAG‑c‑cccctga < 1:5050057/93‑5 (MQ=255) tAACACGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAG‑c‑cccctga < 1:2267494/93‑5 (MQ=255) tAACACGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAG‑c‑cccctga < 1:1182455/93‑5 (MQ=255) tAACACGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAG‑c‑cccctga > 1:1803165/1‑89 (MQ=255) tAACACGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAG‑c‑cccctga < 2:6310649/93‑5 (MQ=255) acacGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATg > 1:2531762/1‑93 (MQ=255) cacGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGc < 1:7705340/93‑1 (MQ=255) cacGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGc > 1:5281746/1‑93 (MQ=255) cacGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGc < 1:7178025/93‑1 (MQ=255) ttCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGtt > 1:5146172/1‑93 (MQ=255) tCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTc < 1:4989730/93‑1 (MQ=255) tgcgcAGATCATCGCTGGCAGAGGCAGAAAGTTGGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGCTGCTGtttt < 2:4289509/92‑3 (MQ=255) cgcgCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCt < 1:7765397/93‑1 (MQ=255) cgcAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGt > 2:2210042/1‑93 (MQ=255) cgcAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGt > 2:3164962/1‑93 (MQ=255) gcAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGtc > 1:4354079/1‑93 (MQ=255) cAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGtca < 2:1505567/93‑1 (MQ=255) gATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGtcatc > 1:7069512/1‑93 (MQ=255) aTAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGtcatca < 1:2225526/93‑1 (MQ=255) tCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCg > 1:6152451/1‑93 (MQ=255) gCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGAc > 2:3212032/1‑93 (MQ=255) gcagaggcagaAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGat < 2:3239099/93‑1 (MQ=255) gcagaggcagaAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGat < 2:5219971/93‑1 (MQ=255) agaggcagaAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGatat < 2:572164/93‑1 (MQ=255) gaggcagaAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATAtt < 2:6873491/93‑1 (MQ=255) gaggcagaAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATAtt > 1:1444681/1‑93 (MQ=255) gaggcagaAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATAtt > 1:3821483/1‑93 (MQ=255) gaggcagaAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATAtt < 2:588950/93‑1 (MQ=255) ggcagaAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGc < 2:6199765/93‑1 (MQ=255) gaAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGGCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGc > 2:4165212/1‑93 (MQ=255) gaAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGc > 1:1503469/1‑93 (MQ=255) gaAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGc > 2:7189908/1‑93 (MQ=255) gaAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGc > 1:2078423/1‑93 (MQ=255) aGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCaaa > 1:2627715/1‑93 (MQ=255) gTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAAt > 2:507916/1‑93 (MQ=255) gTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAAt > 2:4791229/1‑93 (MQ=255) tttGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAAtt > 1:4552068/1‑93 (MQ=255) tGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATtca < 1:3686935/93‑1 (MQ=255) tGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATtca < 1:924234/93‑1 (MQ=255) ggCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATtcat < 2:1330114/93‑1 (MQ=255) cgcAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATtcatca > 1:4861514/1‑93 (MQ=255) gcAAACCTGCTCCATATTGCTGATGATCGCCGCCCGCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTcatcat > 2:7829484/1‑93 (MQ=255) gcAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTcatcat > 1:5713101/1‑93 (MQ=255) gcAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTcatcat < 1:6581972/93‑1 (MQ=255) gcAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTcatcat < 2:467579/93‑1 (MQ=255) cAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCatcatc < 1:7241693/93‑1 (MQ=255) cAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCatcatc < 2:3052579/93‑1 (MQ=255) aaaCCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATcc < 1:1008214/93‑1 (MQ=255) aaaCCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATcc < 2:545257/93‑1 (MQ=255) aaaCCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATcc > 2:669163/1‑93 (MQ=255) aaCCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCt < 1:3021737/93‑1 (MQ=255) aaCCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCt < 2:1794011/93‑1 (MQ=255) aaCCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCt > 1:7568625/1‑93 (MQ=255) aaCCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCt > 2:5765913/1‑93 (MQ=255) ccTGCTCCATATTGCTGATGATCTCTGCTCCGAG‑CGCCCTGATGCTGTTCTGTCATCAGGCGACGAATTTCGTCTGCAAATTTATTCTCCTGa < 2:4465487/93‑1 (MQ=255) cTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGaa > 2:3473035/1‑93 (MQ=255) tGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAAt > 2:7344313/1‑93 (MQ=255) gCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATc < 1:6117756/93‑1 (MQ=255) cTCCCTCTTGGTGGTGATCTCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCa < 2:6997660/93‑1 (MQ=255) cTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCa < 2:1581797/93‑1 (MQ=255) tCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAg > 2:2509184/1‑93 (MQ=255) tCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAg < 1:1966150/93‑1 (MQ=255) tCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAg > 1:2435234/1‑93 (MQ=255) ccATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGc > 2:39100/1‑93 (MQ=255) ccATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGc < 2:5941475/93‑1 (MQ=255) tatTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGAc > 1:4449545/1‑93 (MQ=255) tatTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGAc > 1:7406893/1‑93 (MQ=255) atTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACa > 2:7225166/1‑93 (MQ=255) ttGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACaa < 1:5331605/93‑1 (MQ=255) tGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACaaa < 2:1028252/93‑1 (MQ=255) cTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATg > 2:1741061/1‑93 (MQ=255) cTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATg > 1:4673713/1‑93 (MQ=255) cTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATg < 2:6626022/93‑1 (MQ=255) cTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATg < 1:4061787/93‑1 (MQ=255) atgatCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGgc < 2:1599885/93‑1 (MQ=255) atgatCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGgc < 1:1094131/93‑1 (MQ=255) tgatCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGgcg > 1:5789989/1‑93 (MQ=255) gatCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGgcgc < 1:1666057/93‑1 (MQ=255) atCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCt > 2:7022766/1‑93 (MQ=255) tCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTg > 2:209025/1‑93 (MQ=255) tCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATCGTCGCTg > 2:3665074/1‑93 (MQ=255) ccgccCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAgg > 2:1462853/1‑93 (MQ=255) cgccCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGa < 1:3171777/93‑1 (MQ=255) cgcaCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGa < 1:4006483/93‑1 (MQ=255) gccCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGAt > 2:6043136/1‑93 (MQ=255) gccCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGAt > 2:4479412/1‑93 (MQ=255) cccccAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATa > 1:792036/1‑93 (MQ=255) cccccAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATa > 2:5346600/1‑93 (MQ=255) cccAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGt > 1:6275936/1‑93 (MQ=255) | AATGTCGCTAACACGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAG‑C‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGT > NC_000913/2501792‑2501971 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |