BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,997,285	(T)_6→7	coding (629/756 nt)	b2865 ←	putative lipoprotein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,997,279	1	.	T	99.7%	1148.7 / NA	315	I212N (ATC→AAC)	b2865	putative lipoprotein
Reads supporting (aligned to +/- strand): ref base . (0/1); major base T (162/151); minor base G (1/0); total (163/152)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 368 total aligned reads displayed.

GCAAGTAACGTAGCGGATCAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGA‑TTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCACTGTGTT  >  NC_000913/2997187‑2997366

gcAAGTAACGTAGCGGATCAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGa                                                                                          <  2:1443106/93‑1 (MQ=255)

gcAAGTAACGTAGCGGATCAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGa                                                                                          <  2:3108988/93‑1 (MQ=255)

 cAAGTAACGTAGCGGATCAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGACCAGATGCCGCATCCGTGCTCCCCATAGTGGCGA‑t                                                                                        <  1:1990476/93‑1 (MQ=255)

 cAAGTAACGTAGCGGATCAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGA‑t                                                                                        <  2:7884314/93‑1 (MQ=255)

  aaGTAACGTAGCGGATCAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGA‑tt                                                                                       >  2:1374831/1‑93 (MQ=255)

   aGTAACGTAGCGGATCAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGA‑ttt                                                                                      >  2:1814040/1‑93 (MQ=255)

   aGTAACGTAGCGGATCAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGA‑ttt                                                                                      >  2:1517692/1‑93 (MQ=255)

    gTAACGTAGCGGATCAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGA‑tttt                                                                                     >  1:7292136/1‑93 (MQ=255)

     tAACGTAGCGGATCAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGA‑ttttt                                                                                    >  1:940440/1‑93 (MQ=255)

      aaCGTAGCGGATCAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGA‑tttttt                                                                                   >  1:5417502/1‑93 (MQ=255)

         gTAGCGGATCAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGA‑tttttttgc                                                                                >  1:2165214/1‑90 (MQ=255)

            gCGGATCAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCa                                                                              <  2:5429268/93‑1 (MQ=255)

            gCGGATCAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGCGCTCCCCATAGTGGCGATTTTTTTGCCCa                                                                              >  1:3872499/1‑93 (MQ=255)

             cGGATCAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAg                                                                             <  2:2641643/93‑1 (MQ=255)

               gATCAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGcc                                                                           >  1:7189520/1‑93 (MQ=255)

                aTCAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCt                                                                          >  1:4076156/1‑93 (MQ=255)

                  cAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTc                                                                        <  1:5702979/93‑1 (MQ=255)

                  cAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTc                                                                        <  2:4497608/93‑1 (MQ=255)

                   aaTTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCa                                                                       <  1:2247191/93‑1 (MQ=255)

                   aaTTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCa                                                                       >  2:4591968/1‑93 (MQ=255)

                   aaTTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCa                                                                       <  1:340642/93‑1 (MQ=255)

                    aTTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCAAGCCTTCAc                                                                      >  2:798855/1‑93 (MQ=255)

                     ttGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACg                                                                     >  2:4329241/1‑93 (MQ=255)

                       gCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCt                                                                   >  1:3258231/1‑93 (MQ=255)

                        ccGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCtt                                                                  >  2:7360024/1‑93 (MQ=255)

                        ccGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCtt                                                                  >  2:6365329/1‑93 (MQ=255)

                        ccGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCtt                                                                  >  2:2723878/1‑93 (MQ=255)

                        ccGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCtt                                                                  <  1:3784345/93‑1 (MQ=255)

                         cGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCttt                                                                 <  1:1876006/93‑1 (MQ=255)

                         cGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCttt                                                                 <  1:311531/93‑1 (MQ=255)

                           ttGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGc                                                               >  1:47465/1‑93 (MQ=255)

                           ttGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGc                                                               <  2:412388/93‑1 (MQ=255)

                           ttGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGc                                                               <  2:371928/93‑1 (MQ=255)

                             gCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGccc                                                             >  1:2503416/1‑93 (MQ=255)

                             gCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGccc                                                             >  2:3048182/1‑93 (MQ=255)

                               aCGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCat                                                           >  1:5622574/1‑93 (MQ=255)

                               aCGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCat                                                           >  1:4273022/1‑93 (MQ=255)

                                cGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCatt                                                          <  1:3747428/93‑1 (MQ=255)

                                  gTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCattat                                                        >  2:4777259/1‑93 (MQ=255)

                                  gTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCattat                                                        <  1:2606514/93‑1 (MQ=255)

                                     aCGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTa                                                     >  2:1907498/1‑93 (MQ=255)

                                     aCGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTa                                                     >  2:3297835/1‑93 (MQ=255)

                                      cGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTAc                                                    <  2:7224086/93‑1 (MQ=255)

                                      cGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTAc                                                    >  2:7743838/1‑93 (MQ=255)

                                       gAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTAcc                                                   >  1:4013603/1‑93 (MQ=255)

                                       gAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTAcc                                                   <  2:3998857/93‑1 (MQ=255)

                                       gAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTAcc                                                   >  1:7418761/1‑93 (MQ=255)

                                       gAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTAcc                                                   <  1:4509644/93‑1 (MQ=255)

                                        aaTCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCa                                                  >  1:86923/1‑93 (MQ=255)

                                         aTCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAg                                                 <  1:4656563/93‑1 (MQ=255)

                                           cTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCa                                               >  1:4114342/1‑93 (MQ=255)

                                            tGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCAt                                              >  1:5810236/1‑93 (MQ=255)

                                            tGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCAt                                              <  1:2659383/93‑1 (MQ=255)

                                             ggAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATc                                             <  2:3511024/93‑1 (MQ=255)

                                              gAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCg                                            >  2:4638021/1‑93 (MQ=255)

                                              gAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCg                                            >  1:1143264/1‑93 (MQ=255)

                                              gAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCg                                            >  1:103583/1‑93 (MQ=255)

                                              gAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCg                                            >  1:5263257/1‑93 (MQ=255)

                                                aaTGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCgtg                                          >  2:5846774/1‑93 (MQ=255)

                                                 aTGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCgtgt                                         <  1:2453289/93‑1 (MQ=255)

                                                 aTGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCgtgt                                         >  2:6557889/1‑93 (MQ=255)

                                                 aTGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCgtgt                                         <  1:5730664/93‑1 (MQ=255)

                                                  tGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTc                                        <  2:912443/93‑1 (MQ=255)

                                                   gCAGGCGAACAGATGCCGTATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTCCCAGCATCGTGTCa                                       <  2:3741219/93‑1 (MQ=255)

                                                   gCAGGCGAACAGATGCCGAATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGGGTCa                                       >  2:1693895/1‑93 (MQ=255)

                                                      ggCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTa                                    <  1:663078/93‑1 (MQ=255)

                                                      ggCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTa                                    <  1:6564576/93‑1 (MQ=255)

                                                      ggCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTa                                    <  2:2148434/93‑1 (MQ=255)

                                                      ggCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTa                                    <  1:4826017/93‑1 (MQ=255)

                                                      ggCGAACAGATGCCGCATCCGTGCTCCCCATAGGGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTa                                    >  2:3395202/1‑93 (MQ=255)

                                                       gCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTAt                                   <  1:6913343/93‑1 (MQ=255)

                                                        cGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATg                                  <  1:627224/93‑1 (MQ=255)

                                                         gAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATgg                                 >  2:2003840/1‑93 (MQ=255)

                                                          aaCAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATggg                                >  2:2526571/1‑93 (MQ=255)

                                                          aaCAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATggg                                >  2:6952547/1‑93 (MQ=255)

                                                          aaCAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATggg                                <  2:7607420/93‑1 (MQ=255)

                                                           aCAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGc                               <  2:3833601/93‑1 (MQ=255)

                                                               aTGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTaa                           <  1:143617/93‑1 (MQ=255)

                                                                tGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAg                          <  2:5028035/93‑1 (MQ=255)

                                                                   cGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCg                       <  2:5994538/93‑1 (MQ=255)

                                                                    gCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCgt                      >  2:5288947/1‑93 (MQ=255)

                                                                      aTCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCgtaa                    <  1:499434/93‑1 (MQ=255)

                                                                      aTCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCgtaa                    <  2:2861898/93‑1 (MQ=255)

                                                                      aTCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTACCCATTATTTACCAGCATTGTGTCATTATGGGCGTAAGCCgtaa                    <  2:5871364/93‑1 (MQ=255)

                                                                       tCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCgtaat                   >  1:7821092/1‑93 (MQ=255)

                                                                       tCCGTGCGCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCCTAAGCCgtaat                   <  1:1760576/93‑1 (MQ=255)

                                                                           tGCTCCCCATAGTGGCGATTTTTTTGCCAAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCgtaatgtaa               <  1:3926702/93‑1 (MQ=255)

                                                                            gCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCgtaatgtaat              <  1:2401330/93‑1 (MQ=255)

                                                                             cTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATc             <  2:6820583/93‑1 (MQ=255)

                                                                              tCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCt            <  1:1373876/93‑1 (MQ=255)

                                                                               ccccATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCtt           <  2:2095007/93‑1 (MQ=255)

                                                                                 ccATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCa         >  2:4161788/1‑93 (MQ=255)

                                                                                  cATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCAc        >  2:5596308/1‑93 (MQ=255)

                                                                                  cATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCAc        <  1:1661112/93‑1 (MQ=255)

                                                                                  cATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCAc        <  2:2449129/93‑1 (MQ=255)

                                                                                     aGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCACtgt     >  1:27683/1‑93 (MQ=255)

                                                                                      gTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATAATGGGCGTAAGCCGTAATGTAATCTTCACtgtg    >  1:7631725/1‑93 (MQ=255)

                                                                                       tGGCGATTTTTTTGCCCAGCGTTCACGCTTTGCCCATTATTTTCCAGCATCGTTCCATTATGGGCGTAAGCCGTAATGTAATCTTCACTgtgt   <  1:319058/93‑1 (MQ=255)

                                                                                       tGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCACTgtgt   <  1:1824383/93‑1 (MQ=255)

                                                                                        ggCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCACTGTGtt  <  1:619346/93‑1 (MQ=255)

GCAAGTAACGTAGCGGATCAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGA‑TTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCACTGTGTT  >  NC_000913/2997187‑2997366

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`