New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1207013 =80 (0.260)115 (0.450) 75/152 1.7 60.1% coding (290/630 nt) ycfK hypothetical protein
?NC_000913 1208842 = 87 (0.340)coding (40/540 nt) b1157 putative tail fiber protein

Only 100 of 400 total aligned reads displayed.

ACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTG  >  NC_000913/1206921‑1207105
                                                                                            |                                                                                            
aCTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCGCTGTGCAAACGGCTCTCGAAAACCT                                                                                              >  1:4039009‑M1/1‑93 (MQ=255)
  ttcccgccCTTCGCGCGCTTCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCGCTGTGCAAACGGCTCTCGAAAACCTTG                                                                                            <  2:2165751‑M1/90‑1 (MQ=255)
  ttACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCGCTGTGCAAACGGCTCTCGAAAACCTTG                                                                                            >  2:1612411‑M1/1‑93 (MQ=255)
    cgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGt                                                                                          <  1:3774567‑M1/5‑1 (MQ=255)
      cgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGttt                                                                                        >  1:6267683‑M1/87‑93 (MQ=255)
       gtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTg                                                                                       <  1:5310924‑M1/8‑1 (MQ=255)
       gCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCGCTGTGCAAACGGCTCTCGAAAACCTTGGTTTG                                                                                       >  2:3081090‑M1/1‑93 (MQ=255)
       gCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTG                                                                                       >  2:2591260‑M1/1‑93 (MQ=255)
        tacatagccaataagcatgttaactccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTgg                                                                                      <  1:5962117‑M1/9‑1 (MQ=255)
        tacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTgg                                                                                      <  2:4215904‑M1/9‑1 (MQ=255)
        cACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCGCTGTGCAAACGGCTCTCGAAAACCTTGGTTTGG                                                                                      >  2:4632053‑M1/1‑93 (MQ=255)
           atagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGgag                                                                                   <  1:3647416‑M1/12‑1 (MQ=255)
             agccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGaa                                                                                 >  1:7402453‑M1/80‑93 (MQ=255)
             agccaataagcatgttaaaaccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGaa                                                                                 >  1:3450749‑M1/80‑93 (MQ=255)
              gccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAg                                                                                <  1:221182‑M1/15‑1 (MQ=255)
                    tgctgTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCGCTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCaa                                                                          >  1:7070369/1‑93 (MQ=255)
                    aagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGATTGGGAGAAGGAGCaa                                                                          <  1:6999727‑M1/21‑1 (MQ=255)
                     gctgTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCGCTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCaaa                                                                         >  2:5887406/1‑93 (MQ=255)
                      gcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCaaaa                                                                        >  2:6942317‑M1/71‑93 (MQ=255)
                       catgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAAc                                                                       >  1:6917916‑M1/70‑93 (MQ=255)
                        gTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCGCTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcatt                                                                      >  1:7545224‑M1/1‑84 (MQ=255)
                        gTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCGCTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcatt                                                                      >  1:229725‑M1/1‑84 (MQ=255)
                        gTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCGCTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACt                                                                      >  1:6419649/1‑93 (MQ=255)
                           aaGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCGCTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacc                                                                   >  2:5922924‑M1/1‑81 (MQ=255)
                             gCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCGCTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATg                                                                 <  1:3187458/93‑1 (MQ=255)
                             gCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCGCTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATg                                                                 <  1:5645396/93‑1 (MQ=255)
                              ccGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCGCTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATgc                                                                <  2:2926016/93‑1 (MQ=255)
                              ccGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCGCTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATgc                                                                >  1:5539687/1‑93 (MQ=255)
                                   aGAATCCGTTTGGCGATATCAAATCGGATGGCGCTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtg                                                           >  1:1293709‑M1/1‑73 (MQ=255)
                                   aGAATCCGTTTGGCGATATCAAATCGGATGGCGCTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCaa                                                           <  2:2668246/93‑1 (MQ=255)
                                    cctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAAc                                                          <  1:2927742‑M1/37‑1 (MQ=255)
                                       tCCGTTTGGCGATATCAAATCGGATGGCGCTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGc                                                       <  2:3345491/93‑1 (MQ=255)
                                        ccGTTTGGCGATATCAAATCGGATGGCGCTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccg                                                      >  2:1036662‑M1/1‑68 (MQ=255)
                                        ccGTTTGGCGATATCAAATCGGATGGCGCTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCt                                                      <  2:6589230/93‑1 (MQ=255)
                                          aaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTAc                                                    >  1:858830‑M1/51‑93 (MQ=255)
                                           tttGGCGATATCAAATCGGATGGCGCTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACa                                                   >  2:3765386/1‑93 (MQ=255)
                                            ttGGCGATATCAAATCGGATGGCGCTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttc                                                  <  2:5559652‑M1/93‑30 (MQ=255)
                                            ttGGCGATATCAAATCGGATGGCGCTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttc                                                  >  2:7133579‑M1/1‑64 (MQ=255)
                                            ttGGCGATATCAAATCGGATGGCGCTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcatta                                                                     <  2:2251763‑M1/74‑11 (MQ=255)
                                            aagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACAt                                                  >  2:5295184‑M1/49‑93 (MQ=255)
                                              ggCGATATCAAATCGGATGGCGCTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccg                                                >  1:1958656‑M1/1‑62 (MQ=255)
                                              ggCGATATCAAATCGGATGGCGCTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTa                                                <  1:5060020/93‑1 (MQ=255)
                                              gcaagaattatgccatttgcttgttatttcttcattttcataaacgTTGGTTCGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTa                                                >  1:2396996‑M1/47‑93 (MQ=255)
                                                aggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAgg                                              <  2:7866069‑M1/49‑1 (MQ=255)
                                                 gATATCAAATCGGATGTCGCTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGa                                             <  1:2628417/93‑1 (MQ=255)
                                                  gaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGAc                                            >  1:116801‑M1/43‑93 (MQ=255)
                                                  gaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGAc                                            >  1:4847889‑M1/43‑93 (MQ=255)
                                                    atgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGc                                          <  2:960023‑M1/53‑1 (MQ=255)
                                                     tgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCa                                         <  2:7482530‑M1/54‑1 (MQ=255)
                                                      gatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCAc                                        <  1:1628921‑M1/55‑1 (MQ=255)
                                                      gatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCAc                                        <  1:100159‑M1/55‑1 (MQ=255)
                                                      cAAATCGGATGGCGCTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttc                                        <  2:6824713‑M1/93‑40 (MQ=255)
                                                      cAAATCGGATGGCGCTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCAc                                        >  1:3574887/1‑93 (MQ=255)
                                                        tgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCg                                      >  2:4504211‑M1/37‑93 (MQ=255)
                                                        aaTCGGATGGCGCTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCg                                      <  1:2770436/93‑1 (MQ=255)
                                                            atttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGttt                                  <  1:396962‑M1/61‑1 (MQ=255)
                                                             gATGGCGCTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTc                                 >  2:2891196/1‑93 (MQ=255)
                                                               tGGCGCTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCAt                               <  2:6167897/93‑1 (MQ=255)
                                                               tGGCGCTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCAt                               >  2:4967249/1‑93 (MQ=255)
                                                                gcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATa                              <  2:6122726‑M1/65‑1 (MQ=255)
                                                                 gcgctgtGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgc                             <  1:515623‑M1/90‑51 (MQ=255)
                                                                  ttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGc                            <  1:4181604‑M1/67‑1 (MQ=255)
                                                                  ttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGc                            <  1:6864047‑M1/67‑1 (MQ=255)
                                                                     ttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCtat                         >  2:727900‑M1/24‑93 (MQ=255)
                                                                     ttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCtat                         <  1:7329951‑M1/70‑1 (MQ=255)
                                                                      gtgCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCtata                        >  2:5656883/1‑93 (MQ=255)
                                                                      gtgCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCtata                        <  1:2686462/93‑1 (MQ=255)
                                                                       tgCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATAc                       <  1:3861205/93‑1 (MQ=255)
                                                                         ttcttcattttcataaacgCTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCg                     >  1:4502979‑M1/20‑93 (MQ=255)
                                                                          tcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCgg                    <  2:6720890‑M1/75‑1 (MQ=255)
                                                                          tcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCgg                    <  2:1221645‑M1/75‑1 (MQ=255)
                                                                           cttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGt                   <  2:182067‑M1/76‑1 (MQ=255)
                                                                           aaCGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctg                   <  1:4365224‑M1/93‑61 (MQ=255)
                                                                           aaCGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctg                   >  2:1321664‑M1/1‑33 (MQ=255)
                                                                            ttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGtt                  >  1:1521450‑M1/17‑93 (MQ=255)
                                                                               gCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctg               <  1:7199004‑M1/93‑65 (MQ=255)
                                                                                ctctCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGa              <  2:5740438/93‑1 (MQ=255)
                                                                                 tctcGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaa             >  2:1495237‑M1/1‑27 (MQ=255)
                                                                                  ttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGAtt            <  1:6719946‑M1/83‑1 (MQ=255)
                                                                                  ctcGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggcctccagccactccgccaacaggctggctgaaa            <  2:4838700‑M1/93‑68 (MQ=255)
                                                                                   tcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtg           <  1:1864588‑M1/84‑1 (MQ=255)
                                                                                   tcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtg           >  1:3035044‑M1/10‑93 (MQ=255)
                                                                                   tcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtg           >  1:7740992‑M1/10‑93 (MQ=255)
                                                                                     gAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgc         >  2:5083685‑M1/1‑23 (MQ=255)
                                                                                      taaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtggtg        >  2:4408406‑M1/7‑93 (MQ=255)
                                                                                      aaagCCTGGGTTTGTGAGAAGGctctgcattacctgttggtgtcccgtttccgtggccttcagccactccgccaacaggctggctgaaatgca        <  1:527856‑M1/93‑72 (MQ=255)
                                                                                      aaaaCCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgca        >  2:6473755‑M1/1‑22 (MQ=255)
                                                                                      aaaaCCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtggtg        >  2:7601739/1‑93 (MQ=255)
                                                                                      aaaaCCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtggtg        >  1:4663012/1‑93 (MQ=255)
                                                                                       aaaCCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaa       >  1:2573349‑M1/1‑21 (MQ=255)
                                                                                         acgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTa     <  2:7728735‑M1/90‑1 (MQ=255)
                                                                                         aCCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTa     >  2:7048875/1‑93 (MQ=255)
                                                                                          cgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTAt    <  2:2709655‑M1/91‑1 (MQ=255)
                                                                                          cgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTAt    >  2:3647415‑M1/3‑93 (MQ=255)
                                                                                          ccTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatgg    <  1:1787088‑M1/93‑76 (MQ=255)
                                                                                            ttGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtg  <  1:4957455‑M1/93‑78 (MQ=255)
                                                                                            ttGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtc  >  1:6051798‑M1/1‑16 (MQ=255)
                                                                                            TTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTg  >  2:1109920‑M1/1‑93 (MQ=255)
                                                                                            TTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTg  <  1:3727700‑M1/93‑1 (MQ=255)
                                                                                            TTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTg  >  1:2113210‑M1/1‑93 (MQ=255)
                                                                                            |                                                                                            
ACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTG  >  NC_000913/1206921‑1207105

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.