New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3349258 =24 (0.080)357 (1.160) 138/184 0.1 93.7% coding (1403/2331 nt) arcB aerobic respiration sensor‑response protein
?NC_000913 = 3349263 NA (NA)coding (1398/2331 nt) arcB aerobic respiration sensor‑response protein

Only 100 of 372 total aligned reads displayed.

AAGGTTGAACCTTTGCCCTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATACCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTC  >  NC_000913/3349171‑3349355
                                                                                            |                                                                                            
aaGGTTGAACCTTTGCCCTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATACCGGTg                                                                                              <  2:2651654/93‑1 (MQ=255)
 aacctttgccctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTgg                                                                                             <  2:5915934‑M1/7‑1 (MQ=255)
  acctttgccctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGc                                                                                            >  2:4634676‑M1/86‑93 (MQ=255)
   cctttgccctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGgcg                                                                                           <  2:6734178‑M1/9‑2 (MQ=255)
    ctttgccctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAg                                                                                          <  2:7452740‑M1/10‑1 (MQ=255)
    ctttgccctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAg                                                                                          <  1:5552177‑M1/10‑1 (MQ=255)
     tttgccctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAgg                                                                                         >  2:3875241‑M1/83‑93 (MQ=255)
     tttgccctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAgg                                                                                         >  2:6618726‑M1/83‑93 (MQ=255)
     tttgccctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAgg                                                                                         <  1:3063964‑M1/11‑1 (MQ=255)
       tgccctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccactaccggtgCCGGTGGCAGGtt                                                                                       >  1:1396095‑M1/81‑93 (MQ=255)
          cctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTAc                                                                                    >  2:2442851‑M1/78‑93 (MQ=255)
          cctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTAc                                                                                    >  2:6316180‑M1/78‑93 (MQ=255)
            tgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCg                                                                                  <  1:878951‑M1/18‑1 (MQ=255)
            tgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCg                                                                                  <  2:7122334‑M1/18‑1 (MQ=255)
            tgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCg                                                                                  <  1:2137737‑M1/18‑1 (MQ=255)
            tggtcgctgggaaccggaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCg                                                                                  <  2:1128669‑M1/18‑1 (MQ=255)
               tcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCa                                                                               >  1:2355711‑M1/73‑93 (MQ=255)
               tcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCa                                                                               <  1:288343‑M1/21‑1 (MQ=255)
                cgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCGGGTTTACCGCCAt                                                                              <  2:7564769‑M1/22‑1 (MQ=255)
                cgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCAt                                                                              >  1:2642196‑M1/72‑93 (MQ=255)
                 gctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATg                                                                             >  1:7257102‑M1/71‑93 (MQ=255)
                   tggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCCTGAc                                                                           <  2:3079941‑M1/25‑1 (MQ=255)
                   tggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGAc                                                                           >  2:3609768‑M1/69‑93 (MQ=255)
                   tggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGAc                                                                           >  1:6655415‑M1/69‑93 (MQ=255)
                   tggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGAc                                                                           <  1:4323451‑M1/25‑1 (MQ=255)
                       aaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTc                                                                       >  1:7823906‑M1/65‑93 (MQ=255)
                       aaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTc                                                                       >  1:5189204‑M1/65‑93 (MQ=255)
                        accgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCt                                                                      >  2:4821209‑M1/64‑93 (MQ=255)
                        accgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCt                                                                      <  1:1327599‑M1/30‑1 (MQ=255)
                           gtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTc                                                                   >  2:6046903‑M1/61‑93 (MQ=255)
                           gtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTc                                                                   <  1:1749689‑M1/33‑1 (MQ=255)
                           gtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTc                                                                   <  1:6280707‑M1/33‑1 (MQ=255)
                           gtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTc                                                                   <  2:6866659‑M1/33‑1 (MQ=255)
                            taatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTtcc                                                                  <  2:1437785‑M1/34‑2 (MQ=255)
                            taatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCa                                                                  <  2:444619‑M1/34‑1 (MQ=255)
                            taatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGATTACCGCCATGACTGTCTTTCa                                                                  <  2:4133539‑M1/34‑1 (MQ=255)
                             aatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCAc                                                                 >  2:6606992‑M1/59‑93 (MQ=255)
                              atatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCAcc                                                                >  2:4062171‑M1/58‑93 (MQ=255)
                              atatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCAcc                                                                >  1:3598142‑M1/58‑93 (MQ=255)
                                atcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTg                                                              >  1:4762575‑M1/56‑93 (MQ=255)
                                 tcgccgcccatatttttcgccagacgacgagaaacgaccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTgg                                                             >  1:7029751‑M1/55‑93 (MQ=255)
                                  cgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGt                                                            >  2:4267861‑M1/54‑93 (MQ=255)
                                   gccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTa                                                           <  2:6267239‑M1/41‑1 (MQ=255)
                                    ccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTaa                                                          >  2:2573647‑M1/52‑93 (MQ=255)
                                    ccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTaa                                                          >  1:3555771‑M1/52‑93 (MQ=255)
                                      gcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATa                                                        >  1:5822631‑M1/50‑93 (MQ=255)
                                      gcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATa                                                        <  1:3206029‑M1/44‑1 (MQ=255)
                                        ccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACa                                                      >  2:6189966‑M1/48‑93 (MQ=255)
                                        ccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACa                                                      >  2:835585‑M1/48‑93 (MQ=255)
                                        ccatatttttcgccagacgacgacaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACa                                                      >  1:5969210‑M1/48‑93 (MQ=255)
                                         catatttttcgccagacgacgagagacggacagaccaatcccggtgCCGGTGGGAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACAt                                                     >  1:5633837‑M1/47‑93 (MQ=255)
                                           tatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATgg                                                   <  1:4383993‑M1/49‑1 (MQ=255)
                                            atttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGc                                                  <  2:5340939‑M1/50‑1 (MQ=255)
                                            atttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGc                                                  >  1:5358218‑M1/44‑93 (MQ=255)
                                              ttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGa                                                <  2:7531128‑M1/52‑1 (MQ=255)
                                                ttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGaaa                                              >  2:5609598‑M1/40‑93 (MQ=255)
                                                  cgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAAt                                            >  2:1334843‑M1/38‑93 (MQ=255)
                                                   gccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAAtt                                           <  1:1979129‑M1/57‑1 (MQ=255)
                                                   gccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAAtt                                           >  2:1735419‑M1/37‑93 (MQ=255)
                                                    ccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAAttt                                          >  2:6911580‑M1/36‑93 (MQ=255)
                                                     cagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAAtttt                                         <  1:7423661‑M1/59‑1 (MQ=255)
                                                      agacgacgagaaacggccagaccaatacgggtgCAGGGAGAAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTa                                        >  1:7379059‑M1/34‑93 (MQ=255)
                                                      agacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTa                                        <  2:2772312‑M1/60‑1 (MQ=255)
                                                      agacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTa                                        <  1:2935706‑M1/60‑1 (MQ=255)
                                                        acgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATc                                      >  1:3751890‑M1/32‑93 (MQ=255)
                                                        acgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATc                                      >  1:6413156‑M1/32‑93 (MQ=255)
                                                        acgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATc                                      >  1:3885330‑M1/32‑93 (MQ=255)
                                                         cgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATcc                                     >  1:458338‑M1/31‑93 (MQ=255)
                                                          gacgagaaacggccagaccaataccggtgTCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCa                                    >  2:7612797‑M1/30‑93 (MQ=255)
                                                          gacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCa                                    <  1:7146787‑M1/64‑1 (MQ=255)
                                                           acgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAg                                   <  1:686217‑M1/65‑1 (MQ=255)
                                                           acgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAg                                   <  2:1965627‑M1/65‑1 (MQ=255)
                                                           acgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAg                                   <  1:991510‑M1/65‑1 (MQ=255)
                                                            cgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGc                                  >  1:1534947‑M1/28‑93 (MQ=255)
                                                            cgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGc                                  >  2:1892495‑M1/28‑93 (MQ=255)
                                                              agaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTc                                <  2:5054042‑M1/68‑1 (MQ=255)
                                                              agaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTc                                <  1:7658588‑M1/68‑1 (MQ=255)
                                                                aaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCAt                              >  2:4736981‑M1/24‑93 (MQ=255)
                                                                 aacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATc                             <  2:2371581‑M1/71‑1 (MQ=255)
                                                                 aacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATc                             <  2:7349813‑M1/71‑1 (MQ=255)
                                                                 aacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATc                             <  1:3378887‑M1/71‑1 (MQ=255)
                                                                  acggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATcc                            >  1:4110627‑M1/22‑93 (MQ=255)
                                                                    ggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTg                          >  2:1839384‑M1/20‑93 (MQ=255)
                                                                    ggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTg                          >  1:1837175‑M1/20‑93 (MQ=255)
                                                                     gccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGc                         <  2:5486041‑M1/75‑1 (MQ=255)
                                                                     gccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGc                         >  1:2423786‑M1/19‑93 (MQ=255)
                                                                      ccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCg                        <  2:5546140‑M1/76‑1 (MQ=255)
                                                                         gaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGaa                     >  2:7280871‑M1/15‑93 (MQ=255)
                                                                          accaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAAt                    >  1:4869191‑M1/14‑93 (MQ=255)
                                                                               taccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGa               >  1:6083089‑M1/9‑93 (MQ=255)
                                                                                 ccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTTCGGAATGCCGATa             <  2:3315403‑M1/87‑1 (MQ=255)
                                                                                  cggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATAc            >  2:6544534‑M1/6‑93 (MQ=255)
                                                                                  cggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATAc            >  2:3280414‑M1/6‑93 (MQ=255)
                                                                                    gtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCa          >  2:1663702‑M1/4‑93 (MQ=255)
                                                                                     tgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCag         >  1:4184659‑M1/3‑93 (MQ=255)
                                                                                      gCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCaga        >  2:784603‑M1/2‑93 (MQ=255)
                                                                                       ccGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACCTGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCagag       <  1:1200589/93‑1 (MQ=255)
                                                                                        cGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGt      <  2:2636957/93‑1 (MQ=255)
                                                                                         ggTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTc     >  2:5209632/1‑93 (MQ=255)
                                                                                            ggCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTc  >  1:1001578/1‑93 (MQ=255)
                                                                                            |                                                                                            
AAGGTTGAACCTTTGCCCTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATACCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTC  >  NC_000913/3349171‑3349355

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.