Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,221,280 T→C L336P (CTG→CCG)  b3076 → evolved beta‑D‑galactosidase alpha subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,221,2800TC99.4% 1053.7 / ‑4.3 338L336P (CTG→CCG) b3076evolved beta‑D‑galactosidase alpha subunit
Reads supporting (aligned to +/- strand):  ref base T (1/1);  new base C (159/176);  total (161/177)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.84e-01

Only 100 of 358 total aligned reads displayed.

ACGTTCTGGAAGTGGTGCCACAACGCGTTGGCTTCCGTGATATCAAAGTGCGCGACGGTCTGTTCTGGATCAATAACCGTTATGTGATGCTGCACGGCGTCAACCGTCACGACAACGATCATCGCAAAGGCCGCGCCGTTGGAATGGATCGCGTCGAGAAAGATCTCCAGTTGATGAAGC  >  NC_000913/3221190‑3221369
                                                                                          |                                                                                         
  gTTCTGGAAGTGGTGCCACAACGCGTTGGCTTCCGTGATATCAAAGTGCGCGACGGTCTGTTCTGGATCAATAACCGTTATGTGATGCCGCAc                                                                                       >  1:3414847/1‑93 (MQ=255)
  gTTCTGGAAGTGGTGCCACAACGCGTTGGCTTCCGTGATATCAAAGTGCGCGACGGTCTGTTCTGGATCAATAACCGTTATGTGATGCCGCAc                                                                                       >  2:4082595/1‑93 (MQ=255)
  gTTCTGGAAGTGGTGCCACAACGCGTTGGCTTCCGTGATATCAAAGTGCGCGACGGTCTGTTCTGGATCAATAACCGTTATGTGATGCCGCAc                                                                                       <  1:879490/93‑1 (MQ=255)
     cTGGAAGTGGTGCCACAACGCGTTGGCTTCCGTGATATCAAAGTGCGCGACGGTCTGTTCTGGATCAATAACCGTTATGTGATGCCGCACGGc                                                                                    >  1:3570168/1‑93 (MQ=255)
     cTGGAAGTGGTGCCACAACGCGTTGGCTTCCGTGATATCAAAGTGCGCGACGGTCTGTTCTGGATCAATAACCGTTATGTGATGCCGCACGGc                                                                                    <  1:1783819/93‑1 (MQ=255)
       ggAAGTGGTGCCACAACGCGTTGGCTTCCGTGATATCAAAGTGCGCGACGGTCTGTTCTGGATCAATAACCGTTATGTGATGCCGCACGGCGt                                                                                  <  1:5613403/93‑1 (MQ=255)
       ggAAGTGGTGCCACAACGCGTTGGCTTCCGTGATATCAAAGTGCGCGACGGTCTGTTCTGGATCAATAACCGTTATGTGATGCCGCACGGCGt                                                                                  <  2:5651734/93‑1 (MQ=255)
          aGTGGTGCCACAACGCGTTGGCTTCCGTGATATCAAAGTGCGCGACGGTCTGTTCTGGATCAATAACCGTTATGTGATGCCGCACGGCGTCaa                                                                               <  2:7408913/93‑1 (MQ=255)
           gtggtgCCACAACGCGTTGGCTTCCGTGATATCAAAGTGCGCGACGGTCTGTTCTGGATCAATAACCGTTATGTGATGCCGCACGGCGTCAAc                                                                              <  1:101651/93‑1 (MQ=255)
           gtggtgCCACAACGCGTTGGCTTCCGTGATATCAAAGTGCGCGACGGTCTGTTCTGGATCAATAACCGTTATGTGATGCCGCACGGCGTCAAc                                                                              <  1:4781564/93‑1 (MQ=255)
           gtggtgCCACAACGCGTTGGCTTCCGTGATATCAAAGTGCGCGACGGTCTGTTCTGGATCAATAACCGTTATGTGATGCCGCACGGCGTCAAc                                                                              <  1:3079849/93‑1 (MQ=255)
             ggtgCCACAACGCGTTGGCTTCCGTGATATCAAAGTGCGCGACGGTCTGTTCTGGATCAATAACCGTTATGTGATGCCGCACGGCGTCAACCg                                                                            >  1:1444462/1‑93 (MQ=255)
               tgCCACAACGCGTTGGCTTCCGTGATATCAAAGTGCGCGACGGTCTGTTCTGGATCAATAACCGTTATGTGATGCCGCACGGCGTCAACCGTc                                                                          <  1:6648952/93‑1 (MQ=255)
               tgCCACAACGCGTTGGCTTCCGTGATATCAAAGTGCGCGACGGTCTGTTCTGGATCAATAACCGTTATGTGATGCCGCACGGCGTCAACCGTc                                                                          >  2:4127015/1‑93 (MQ=255)
                gCCACAACGCGTTGGCTTCCGTGATATCAAAGTGCGCGACGGTCTGTTCTGGATCAATAACCGTTATGTGATGCCGCACGGCGTCAACCGTCa                                                                         <  1:436140/93‑1 (MQ=255)
                 ccACAACGCGTTGGCTTCCGTGATATCAAAGTGCGCGACGGTCTGTTCTGGATCAATAACCGTTATGTGATGCCGCACGGCGTCAACCGTCAc                                                                        >  1:5178716/1‑93 (MQ=255)
                    caACGCGTTGGCTTCCGTGATATCAAAGTGCGCGACGGTCTGTTCTGGATCAATAACCGTTATGTGATGCCGCACGGCGTCAACCGTCACGAc                                                                     <  2:6020388/93‑1 (MQ=255)
                     aaCGCGTTGGCTTCCGTGATATCAAAGTGCGCGACGGTCTGTTCTGGATCAATAACCGTTATGTGATGCCGCACGGCGTCAACCGTCACGACa                                                                    >  1:7699296/1‑93 (MQ=255)
                     aaCGCGTTGGCTTCCGTGATATCAAAGTGCGCGACGGTCTGTTCTGGATCAATAACCGTTATGTGATGCCGCACGGCGTCAACCGTCACGACa                                                                    >  1:736726/1‑93 (MQ=255)
                      aCGCGTTGGCTTCCGTGATATCAAAGTGCGCGACGGTCTGTTCTGGATCAATAACCGTTATGTGATGCCGCACGGCGTCAACCGTCACGACaa                                                                   <  2:5225342/93‑1 (MQ=255)
                      aCGCGTTGGCTTCCGTGATATCAAAGTGCGCGACGGTCTGTTCTGGATCAATAACCGTTATGTGATGCCGCACGGCGTCAACCGTCACGACaa                                                                   <  1:1667859/93‑1 (MQ=255)
                       cgcgTTGGCTTCCGTGATATCAAAGTGCGCGACGGTCTGTTCTGGATCAATAACCGTTATGTGATGCCGCACGGCGTCAACCGTCACGACAAc                                                                  <  1:3893079/93‑1 (MQ=255)
                       cgcgTTGGCTTCCGTGATATCAAAGTGCGCGACGGTCTGTTCTGGATCAATAACCGTTATGGGATGCCGCACGGCGTCAACCGTCACGACAAc                                                                  >  1:7886973/1‑93 (MQ=255)
                         cgTTGGCTTCCGTGATATCAAAGTGCGCGACGGTCTGTTCTGGATCAATAACCGTTATGTGATGCCGCACGGCGTCAACCGTCACGACAACGa                                                                <  2:4659397/93‑1 (MQ=255)
                         cgTTGGCTTCCGTGATATCAAAGTGCGCGACGGTCTGTTCTGGATCAATAACCGTTATGTGATGCCGCACGGCGTCAACCGTCACGACAACGa                                                                <  2:5506761/93‑1 (MQ=255)
                         cgTTGGCTTCCGTGATATCAAAGTGCGCGACGGTCTGTTCTGGATCAATAACCGTTATGTGATGCCGCACGGCGTCAACCGTCACGACAACGa                                                                >  1:3338860/1‑93 (MQ=255)
                          gTTGGCTTCCGTGATATCAAAGTGCGCGACGGTCTGTTCTGGATCAATAACCGTTATGTGATGCCGCACGGCGTCAACCGTCACGACAACGat                                                               <  1:5208846/93‑1 (MQ=255)
                          gTTGGCTTCCGTGATATCAAAGTGCGCGACGGTCTGTTCTGGATCAATAACCGTTATGTGATGCCGCACGGCGTCAACCGTCACGACAACGat                                                               <  1:60999/93‑1 (MQ=255)
                           ttGGCTTCCGTGATATCAAAGTGCGCGACGGTCTGTTCTGGATCAATAACCGTTATGTGATGCCGCACGGCGTCAACCGTCACGACAACGatc                                                              >  1:1205370/1‑93 (MQ=255)
                           ttGGCTTCCGTGATATCAAAGTGCGCGACGGTCTGTTCTGGATCAATAACCGTTATGTGATGCCGCACGGCGTCAACCGTCACGACAACGatc                                                              >  2:6391686/1‑93 (MQ=255)
                              gCTTCCGTGATATCAAAGTGCGCGACGGTCTGTTCTGGATCAATAACCGTTATGTGATGCCGCACGGCGTCAACCGTCACGACAACGatcatc                                                           <  2:2834057/93‑1 (MQ=255)
                                ttCCGTGATATCAAAGTGCGCGACGGTCTGTTCTGGATCAATAACCGTTATGTGATGCCGCACGGCGTCAACCGTCACGACAACGATCATCGc                                                         >  1:2266345/1‑93 (MQ=255)
                                ttCCGTGATATCAAAGTGCGCGACGGTCTGTTCTGGATCAATAACCGTTATGTGATGCCGCACGGCGTCAACCGTCACGACAACGATCATCGc                                                         >  1:2959462/1‑93 (MQ=255)
                                   cGTGATATCAAAGTGCGCGACGGTCTGTTCTGGATCAATAACCGTTATGTGATGCCGCACGGCGTCAACCGTCACGACAACGATCATCGCaaa                                                      <  2:1529421/93‑1 (MQ=255)
                                   cGTGATATCAAAGTGCGCGACGGTCTGTTCTGGATCAATAACCGTTATGTGATGCCGCACGGCGTCAACCGTCACGACAACGATCATCGCaaa                                                      <  2:2969604/93‑1 (MQ=255)
                                   cGTGATATCAAAGTGCGCGACGGTCTGTTCTGGATCAATAACCGTTATGTGATGCCGCACGGCGTCAACCGTCACGACAACGATCATCGCaaa                                                      >  1:1599832/1‑93 (MQ=255)
                                    gTGATATCAAAGTGCGCGACGGTCTGTTCTGGATCAATAACCGTTATGTGATGCCGCACGGCGTCAACCGTCACGACAACGATCATCGCAAAg                                                     >  1:535992/1‑93 (MQ=255)
                                       atatCAAAGTGCGCGACGGTCTGTTCTGGATCAATAACCGTTATGTGATGCCGCACGGCGTCAACCGTCACGACAACGATCATCGCAAAGGcc                                                  <  2:1305895/93‑1 (MQ=255)
                                        tatCAAAGTGCGCGACGGTCTGTTCTGGATCAATAACCGTTATGTGATGCCGCACGGCGTCAACCGTCACGACAACGATCATCGCAAAGGCcg                                                 <  2:791626/93‑1 (MQ=255)
                                        tatCAAAGTGCGCGACGGTCTGTTCTGGATCAATAACCGTTATGTGATGCCGCACGGCGTCAACCGTCACGACAACGATCATCGCAAAGGCcg                                                 >  1:1882567/1‑93 (MQ=255)
                                        tatCAAAGTGCGCGACGGTCTGTTCTGGATCAATAACCGTTATGTGATGCCGCACGGCGTCAACCGTCACGACAACGATCATCGCAAAGGCcg                                                 <  1:3166069/93‑1 (MQ=255)
                                         atCAAAGTGCGCGACGGTCTGTTCTGGATCAATAACCGTTATGTGATGCCGCACGGCGTCAACCGTCACGACAACGATCATCGCAAAGGCcgc                                                >  2:3213041/1‑93 (MQ=255)
                                         atCAAAGTGCGCGACGGTCTGTTCTGGATCAATAACCGTTATGTGATGCCGCACGGCGTCAACCGTCACGACAACGATCATCGCAAAGGCcgc                                                <  2:7105884/93‑1 (MQ=255)
                                           cAAAGTGCGCGACGGTCTGTTCTGGATCAATAACCGTTATGTGATGCCGCACGGCGTCAACCGTCACGACAACGATCATCGCAAAGGCCgcgc                                              >  2:4750091/1‑93 (MQ=255)
                                            aaaGTGCGCGACGGTCTGTTCTGGATCAATAACCGTTATGTGATGCCGCACGGCGTCAACCGTCACGACAACGATCATCGCAAAGGCCGCGcc                                             >  2:5812287/1‑93 (MQ=255)
                                             aaGTGCGCGACGGTCTGTTCTGGATCAATAACCGTTATGTGATGCCGCACGGCGTCAACCGTCACGACAACGATCATCGCAAAGGCCGCGCCg                                            >  1:7900995/1‑93 (MQ=255)
                                              aGTGCGCGACGGTCTGTTCTGGATCAATAACCGTTATGTGATGCCGCACGGCGTCAACCGTCACGACAACGATCATCGCAAAGGCCGCGCCGt                                           <  2:2664445/93‑1 (MQ=255)
                                              aGTGCGCGACGGTCTGTTCTGGATCAATAACCGTTATGTGATGCCGCACGGCGTCAACCGTCACGACAACGATCATCGCAAAGGCCGCGCCGt                                           >  2:2106497/1‑93 (MQ=255)
                                              aGTGCGCGACGGTCTGTTCTGGATCAATAACCGTTATGTGATGCCGCACGGCGTCAACCGTCACGACAACGATCATCGCAAAGGCCGCGCCGt                                           >  2:7549963/1‑93 (MQ=255)
                                               gTGCGCGACGGTCTGTTCTGGATCAATAACCGTTATGTGATGCCGCACGGCGTCAACCGTCACGACAACGATCATCGCAAAGGCCGCGCCGtt                                          <  1:6236552/93‑1 (MQ=255)
                                               gTGCGCGACGGTCTGTTCTGGATCAATAACCGTTATGTGATGCCGCACGGCGTCAACCGTCACGACAACGATCATCGCAAAGGCCGCGCCGtt                                          >  1:5562538/1‑93 (MQ=255)
                                                   gcgACGGTCTGTTCTGGATCAATAACCGTTATGTGATGCCGCACGGCGTCAACCGTCATGACAACGATCATCGCAAAGGCCGCGCCGTTGGaa                                      >  1:4497057/1‑93 (MQ=255)
                                                   gcgACGGTCTGTTCTGGATCAATAACCGTTATGTGATGCCGCACGGCGTCAACCGTCACGACAACGATCATCGCAAAGGCCGCGCCGTTGGaa                                      >  2:198615/1‑93 (MQ=255)
                                                   gcgACGGTCTGTTCTGGATCAATAACCGTTATGTGATGCCGCACGGCGTCAACCGTCACGACAACGATCATCGCAAAGGCCGCGCCGTTGGaa                                      >  1:3678020/1‑93 (MQ=255)
                                                   gcgACGGTCTGTTCTGGATCAATAACCGTTATGTGATGCCGCACGGCGTCAACCGTCACGACAACGATCATCGCAAAGGCCGCGCCGTTGGaa                                      <  2:3285458/93‑1 (MQ=255)
                                                      aCGGTCTGTTCTGGATCAATAACCGTTATGTGATGCCGCACGGCGTCAACCGTCACGACAACGATCATCGCAAAGGCCGCGCCGTTGGAATgg                                   >  2:671941/1‑93 (MQ=255)
                                                       cGGTCTGTTCTGGATCAATAACCGTTATGTGATGCCGCACGGCGTCAACCGTCACGACAACGATCATCGCAAAGGCCGCGCCGTTGGAATGGa                                  <  2:3424660/93‑1 (MQ=255)
                                                        ggTCTGTTCTGGATCAATAACCGTTATGTGATGCCGCACGGCGTCAACCGTCACGACAACGATCATCGCAAAGGCCGCGCCGTTGGAATGGAt                                 <  1:6412648/93‑1 (MQ=255)
                                                        ggTCTGTTCTGGATCAATAACCGTTATGTGATGCCGCACGGCGTCAACCGTCACGACAACGATCATCGCAAAGGCCGCGCCGTTGGAATGGAt                                 >  2:4511841/1‑93 (MQ=255)
                                                        ggTCTGTTCTGGATCAATAACCGTTATGTGATGCCGCACGGCGTCAACCGTCACGACAACGATCATCGCAAAGGCCGCGCCGTTGGAATGGAt                                 <  1:5759034/93‑1 (MQ=255)
                                                        cgTCTGTACTGGAACAATAACCGTTATGTGATGCCGCAGGGCGTCAAGCGTAACGACAACGATCATCGCAAAGGCCGCGCCGTGGGAATGGAt                                 <  2:4984902/92‑1 (MQ=255)
                                                         gTCTGTTCTGGATCAATAACCGTTATGTGATGCCGCACGGCGTCAACCGTCACGACAACGATCATCGCAAAGGCCGCGCCGTTGGAATGGATc                                <  2:2504770/93‑1 (MQ=255)
                                                         gTCTGTTCTGGATCAATAACCGTTATGTGATGCCGCACGGCGTCAACCGTCACGACAACGATCATCGCAAAGGCCGCGCCGTTGGAATGGATc                                <  1:4081428/93‑1 (MQ=255)
                                                         gTCTGTTCTGGATCAATAACCGTTATGTGATGCCGCACGGCGTCAACCGTCACGACAACGATCATCGCAAAGGCCGCGCCGTTGGAATGGATc                                <  2:240239/93‑1 (MQ=255)
                                                         gTCTGTTCTGGATCAATAACCGTTATGTGATGCCGCACGGCGTCAACCGTCACGACAACGATCATCGCAAAGGCCGCGCCGTTGGAATGGATc                                >  2:7268431/1‑93 (MQ=255)
                                                         gTCTGTTCTGGATCAATAACCGTTATGTGATGCCGCACGGCGTCAACCGTCACGACAACGATCATCGCAAAGGCCGCGCCGTTGGAATGGATc                                <  2:5409841/93‑1 (MQ=255)
                                                          tCTGTTCTGGATCAATAACCGTTATGTGATGCCGCACGGCGTCAACCGTCACGACAACGATCATCGCAAAGGCCGCGCCGTTGGAATGGATcg                               >  2:4844365/1‑93 (MQ=255)
                                                           cTGTTCTGGATCAATAACCGTTATGTGATGCCGCACGGCGTCAACCGTCACGACAACGATCATCGCAAAGGCCGCGCCGTTGGAATGGATcgc                              <  1:6585706/93‑1 (MQ=255)
                                                             gTTCTGGATCAATAACCGTTATGTGATGCCGCACGGCGTCAACCGTCGCGACAACGATCATCGCAAAGGCCGCGCCGTTGGAATGGATCGCGt                            <  2:1703773/93‑1 (MQ=255)
                                                                cTGGATCAATAACCGTTATGTGATGCCGCACGGCGTCAACCGTCACGACAACGATCATCGCAAAGGCCGCGCCGTTGGAATGGATCGCGTCga                         <  2:7644324/93‑1 (MQ=255)
                                                                  ggATCAATAACCGTTATGTGATGCCGCACGGCGTCAACCGTCACGACAACGATCATCGCAAAGGCCGCGCCGTTGGAATGGATCGCGTCgaga                       >  2:5037473/1‑93 (MQ=255)
                                                                  ggATCAATAACCGTTATGTGATGCCGCACGGCGTCAACCGTCACGACAACGATCATCGCAAAGGCCGCGCCGTTGGAATGGATCGCGTCgaga                       >  2:3082218/1‑93 (MQ=255)
                                                                  ggATCAATAACCGTTATGTGATGCCGCACGGCGTCAACCGTCACGACAACGATCATCGCAAAGGCCGCGCCGTTGGAATGGATCGCGTCgaga                       >  2:2018420/1‑93 (MQ=255)
                                                                     tCAATCACCGTTATGTGATGCCGCACGGCGTCAACCGTCACGTCAACGATCATCGCAAAGGCCGCGCCGTTGGAATGGATCGCGTCGCGaacg                    <  2:6994634/93‑3 (MQ=255)
                                                                     tCAATAACCGTTATGTGATGCCGCACGGCGTCAACCGTCACGACAACGATCATCGCAAAGGCCGCGCCGTTGGAATGGATCGCGTCGAGAAAg                    >  2:6177505/1‑93 (MQ=255)
                                                                     tCAATAACCGTTATGTGATGCCGCACGGCGTCAACCGTCACGACAACGATCATCGCAAAGGCCGCGCCGTTGGAATGGATCGCGTCGAGAAAg                    >  2:649299/1‑93 (MQ=255)
                                                                     tCAATAACCGTTATGTGATGCCGAACGGCGTCAACCGTCACGACAACGATCATCGCAAAGGCCGCGCCGTTGGAATGGATCGCGTCGAGAAAg                    <  2:4325700/93‑1 (MQ=255)
                                                                      cAATAACCGTTATGTGATGCCGCACGGCGTCAACCGTCACGACAACGATCATCGCAAAGGCCGCGCCGTTGGAATGGATCGCGTCGAGAAAGa                   >  2:6759377/1‑93 (MQ=255)
                                                                       aaTAACCGTTATGTGATGCCGCACGGCGTCAACCGTCACGACAACGATCATCGCAAAGGCCGCGCCGTTGGAATGGATCGCGTCGAGAAAGAt                  <  2:3902719/93‑1 (MQ=255)
                                                                        aTAACCGTTATGTGATGCCGCACGGCGTCAACCGTCACGACAACGATCATCGCAAAGGCCGCGCCGTTGGAATGGATCGCGTCGAGAAAGAtc                 <  2:3777095/93‑1 (MQ=255)
                                                                         tAACCGTTATGTGATGCCGCACGGCGTCAACCGTCACGACAACGATCATCGCAAAGGCCGCGCCGTTGGAATGGATCGCGTCGAGAAAGGtcc                >  2:2255189/1‑92 (MQ=255)
                                                                         tAACCGTTATGTGATGCCGCACGGCGTCAACCGTCACGACAACGATCATCGCAAAGGCCGCGCCGTTGGAATGGATCGCGTCGAGAAAGAtct                >  1:4674070/1‑93 (MQ=255)
                                                                          aaCCGTTATGTGATGCCGCACGGCGTCAACCGTCACGACAACGATCATCGCAAAGGCCGCGCCGTTGGAATGGATCGCGTCGAGAAAGAtctc               >  2:3041332/1‑93 (MQ=255)
                                                                          aaCCGTTATGTGATGCCGCACGGCGTCAACCGTCACGACAACGATCATCGCAAAGGCCGCGCCGTTGGAATGGATCGCGTCGAGAAAGAtctc               <  2:1050608/93‑1 (MQ=255)
                                                                           aCCGTTATGTGATGCCGCACGGCGTCAACCGTCACGACAACGATCATCGCAAAGGCCGCGCCGTTGGAATGGATCGCGTCGAGAAAGATCTcc              <  2:6837729/93‑1 (MQ=255)
                                                                             cGTTATGTGATGCCGCACGGCGTCAACCGTCACGACAACGATCATCGCAAAGGCCGCGCCGTTGGAATGGATCGCGTCGAGAAAGATCTCCAg            <  2:3572778/93‑1 (MQ=255)
                                                                             cGTTATGTGATGCCGCACGGCGTCAACCGTCACGACAACGATCATCGCAAAGGCCGCGCCGTTGGAATGGATCGCGTCGAGAAAGATCTCCAg            <  2:7357157/93‑1 (MQ=255)
                                                                              gTTATGTGATGCCGCACGGCGTCAGCCGTCAGGACAACGATCATCGCAAAGGCCGCTCCGTTGGAATGGATCGCGTCGAGAAAGATCTCCAGt           <  2:1166289/93‑1 (MQ=255)
                                                                              gTTATGTGATGCCGCACGGCGTCAACCGTCACGACAACGATCATCGCAAAGGCCGCGCCGTTGGAATGGATCGCGTCGAGAAAGATCTCCAGt           <  2:1834476/93‑1 (MQ=255)
                                                                               ttATGTGATGCCGCACGGCGTCAACCGTCACGACAACGATCATCGCAAAGGCCGCGCCGTTGGAATGGATCGCGTCGAGAAAGATCTCCAGtt          >  1:7234992/1‑93 (MQ=255)
                                                                               ttATGTGATGCCGCACGGCGTCAACCGTCACGACAACGATCATCGCAAAGGCCGCGCCGTTGGAATGGATCGCGTCGAGAAAGATCTCCAGtt          >  1:2640585/1‑93 (MQ=255)
                                                                               gtATGTGATGCCGCACGGCGTCAACCGTCACGACAACGATCATCGCAAAGGCCGCGCCTTTGGAATGGATCGCGTCGAGAAAGATCTCCAGtt          <  1:2466196/92‑1 (MQ=255)
                                                                                tATGTGATGCCGCACGGCGTCAACCGTCACGACAACGATCATCGCAAAGGCCGCGCCGTTGGAATGGATCGCGTCGAGAAAGATCTCCAGTtg         >  2:1954759/1‑93 (MQ=255)
                                                                                 aTGTGATGCCGCACGGCGTCAACCGTCACGACAACGATCATCGCAAAGGCCGCGCCGTTGGAATGGATCGCGTCGAGAAAGATCTCCAGTtga        >  2:1417620/1‑93 (MQ=255)
                                                                                  tgtgATGCCGCACGGCGTCAACCGTCACGACAACGATCATCGCAAAGGCCGCGCCGTTGGAATGGATCGCGTCGAGAAAGATCTCCAGTtgat       <  1:6816056/93‑1 (MQ=255)
                                                                                  tgtgATGCCGCACGGCGTCAACCGTCACGACAACGATCATCGCAAAGGCCGCGCCGTTGGAATGGATCGCGTCGAGAAAGATCTCCAGTtgat       <  1:2026477/93‑1 (MQ=255)
                                                                                   gtgATGCCGCACGGCGTCAACCGTCACGACAACGATCATCGCAAAGGCCGCGCCGTTGGAATGGATCGCGTCGAGAAAGATCTCCAGTtgatg      <  1:4890385/93‑1 (MQ=255)
                                                                                     gATGCCGCACGGCGTCAACCGTCACGACAACGATCATCGCAAAGGCCGCGCCGTTGGAATGGATCGCGTCGAGAAAGATCTCCAGTTGATGaa    >  1:7135360/1‑93 (MQ=255)
                                                                                      aTGCCGCACGGCGTCAACCGTCACGACAACGATCATCGCAAAGGCCGCGCCGTTGGAATGGATCGCGTCGAGAAAGATCTCCAGTTGATGAag   >  1:5840882/1‑93 (MQ=255)
                                                                                       tgccgcACGGCGTCAACCGTCACGACAACGATCATCGCAAAGGCCGCGCCGTTGGAATGGATCGCGTCGAGAAAGATCTCCAGTTGATGAagc  >  2:3465749/1‑93 (MQ=255)
                                                                                          |                                                                                         
ACGTTCTGGAAGTGGTGCCACAACGCGTTGGCTTCCGTGATATCAAAGTGCGCGACGGTCTGTTCTGGATCAATAACCGTTATGTGATGCTGCACGGCGTCAACCGTCACGACAACGATCATCGCAAAGGCCGCGCCGTTGGAATGGATCGCGTCGAGAAAGATCTCCAGTTGATGAAGC  >  NC_000913/3221190‑3221369

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: