BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,237,258	A→G	intergenic (+71/‑326)	ygjT → / → ygjU	putative transport protein/putative transport protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,237,258	0	A	G	100.0%	944.5 / NA	314	intergenic (+71/‑326)	ygjT/ygjU	putative transport protein/putative transport protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (156/158); total (156/158)

Only 100 of 332 total aligned reads displayed.

AAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCT‑CC‑TCT‑CCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCG  >  NC_000913/3237170‑3237347

 agcagcGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCT‑CCATCTCCCTTCCAGGGAGgggg                                                                                        <  1:2972911/93‑1 (MQ=255)

  gcagcGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCTCCC‑TCTCCCTTCCAGGGAGGGGGt                                                                                       <  1:5328114/93‑1 (MQ=255)

  gcagcGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCTCCC‑TCTCCCTTCCAGGGAGGGGGt                                                                                       >  2:471431/1‑93 (MQ=255)

  gcagcGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCTCCC‑TCTCCCTTCCAGGGAGGGGGt                                                                                       <  1:6016932/93‑1 (MQ=255)

   cagcGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCTCCC‑TCTCCCTTCCAGGGAGGGGGTc                                                                                      <  1:1098176/93‑1 (MQ=255)

   cagcGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCTCCC‑TCTCCCTTCCAGGGAGGGGGTc                                                                                      <  2:4435987/93‑1 (MQ=255)

   cagcGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCTCCC‑TCTCCCTTCCAGGGAGGGGGTc                                                                                      <  2:5284295/93‑1 (MQ=255)

   cagcGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCTCCC‑TCTCCCTTCCAGGGAGGGGGTc                                                                                      <  2:7596122/93‑1 (MQ=255)

    agcGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCTCCC‑TCTCCCTTCCAGGGAGGGGGTCg                                                                                     >  2:3148420/1‑93 (MQ=255)

     gcGGGGCGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCTCCC‑TCTCCCTTCCAGGGAGGTGGTCgg                                                                                    >  2:1599237/1‑93 (MQ=255)

       ggggTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCTCCC‑TCTCCCTTCCAGGGAGGGGGTCgggg                                                                                  <  1:874667/93‑1 (MQ=255)

       ggggTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCTCCC‑TCTCCCTTCCAGGGAGGGGGTCgggg                                                                                  <  2:1853419/93‑1 (MQ=255)

       ggggTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCTCCC‑TCTCCCTTCCAGGGAGGGGGTCgggg                                                                                  <  1:3622932/93‑1 (MQ=255)

       ggggTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCTCCC‑TCTCCCTTCCAGGGAGGGGGTCgggg                                                                                  >  2:2298994/1‑93 (MQ=255)

        gggTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCTCCC‑TCTCCCTTCCAGGGAGGGGGTCggggg                                                                                 >  2:6780166/1‑92 (MQ=255)

        gggTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCTCCC‑TCTCCCTTCCAGGGAGGGGGTCGGGGt                                                                                 <  2:6441481/93‑1 (MQ=255)

         ggTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCTCCC‑TCTCCCTTCCAGGGAGGGGGTCGGGGTg                                                                                >  2:2743996/1‑93 (MQ=255)

          gTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCTCCC‑TCTCCCTTCCAGGGAGGGGGTCGGGGTGa                                                                               <  2:7165714/93‑1 (MQ=255)

           tGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCTCCC‑TCTCCCTTCCAGGGAGGGGGTCGGGGTGAg                                                                              <  1:7791367/93‑1 (MQ=255)

            ggATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCTCCC‑TCTCCCTTCCAGGGAGGGGGTCGGGGTGAgg                                                                             >  1:7204965/1‑93 (MQ=255)

             gATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCTCCC‑TCTCCCTTCCAGGGAGGGGGTCGGGGTGAggg                                                                            <  1:7486580/93‑1 (MQ=255)

             gATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCTCCC‑TCTCCCTTCCAGGGAGGGGGTCGGGGTGAggg                                                                            >  2:4201068/1‑93 (MQ=255)

             gATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCTCCC‑TCTCCCTTCCAGGGAGGGGGTCGGGGTGAggg                                                                            >  1:2614317/1‑93 (MQ=255)

                aaTTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCTCCC‑TCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTaa                                                                         >  2:3092265/1‑93 (MQ=38)

                 aTTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCTCCC‑TCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAAt                                                                        <  1:3928297/93‑1 (MQ=255)

                  tttttAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCTCCC‑TCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAAtt                                                                       >  1:5883218/1‑93 (MQ=38)

                    tttAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCTCCC‑TCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAAtttt                                                                     >  2:4109385/1‑93 (MQ=38)

                     ttAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCTCCC‑TCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAAttttt                                                                    <  1:4371668/93‑1 (MQ=255)

                     ttAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCTCCC‑TCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAAttttt                                                                    >  2:3864906/1‑93 (MQ=38)

                      tAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCTCCC‑TCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTc                                                                   <  2:6472746/93‑1 (MQ=38)

                         tCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCTCCC‑TCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCa                                                                >  2:4880606/1‑93 (MQ=38)

                         tCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCTCCC‑TCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCa                                                                >  1:939648/1‑93 (MQ=38)

                         tCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCTCCC‑TCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCa                                                                >  1:1992333/1‑93 (MQ=38)

                         tCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCTCCC‑TCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCa                                                                <  1:7368282/93‑1 (MQ=37)

                           tGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCTCCC‑TCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCAcc                                                              >  2:3386142/1‑93 (MQ=38)

                            gCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCTCCC‑TCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCg                                                             >  2:7910807/1‑93 (MQ=38)

                            gCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCTCCC‑TCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCg                                                             <  2:929933/93‑1 (MQ=38)

                             ccTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCTCCC‑TCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGa                                                            <  1:7659464/93‑1 (MQ=255)

                             ccTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCTCCC‑TCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGa                                                            <  1:2432036/93‑1 (MQ=255)

                             ccTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCTCCC‑TCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGa                                                            >  1:4171754/1‑93 (MQ=38)

                             ccTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCTCCC‑TCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGa                                                            >  1:5465696/1‑93 (MQ=38)

                              cTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCTCCC‑TCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGAt                                                           >  1:6653596/1‑93 (MQ=38)

                              cTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCTCCC‑TCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGAt                                                           <  2:7402543/93‑1 (MQ=255)

                              cTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCTCCC‑TCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGAt                                                           >  2:3600169/1‑93 (MQ=38)

                               caaGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCTCCC‑TCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATg                                                          <  1:2172360/92‑1 (MQ=37)

                                  gCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCTCCC‑TCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTg                                                       <  2:7671992/93‑1 (MQ=37)

                                  gCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCTCCC‑TCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTg                                                       <  1:133115/93‑1 (MQ=38)

                                   ccGTGTACCCTGTCATTAACATGAGCACCGTTTTCTCCC‑TCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTgg                                                      <  2:7874000/93‑1 (MQ=255)

                                    cGTGTACCCTGTCATTAACATGAGCACCGTTTTCTCCC‑TCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGc                                                     >  2:1889444/1‑93 (MQ=37)

                                     gtgtACCCTGTCATTAACATGAGCACCGTTTTCTCCC‑TCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGcc                                                    >  1:1027574/1‑93 (MQ=37)

                                     gtgtACCCTGTCATTAACATGAGCACCGTTTTCTCCC‑TCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGcc                                                    <  1:3134098/93‑1 (MQ=38)

                                      tgtACCCTGTCATTAACATGAGCACCGTTTTCTCCC‑TCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCt                                                   >  2:4024043/1‑93 (MQ=37)

                                        tACCCTGTCATTAACATGAGCACCGTTTTCTCCC‑TCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGt                                                 >  1:804229/1‑93 (MQ=37)

                                        tACCCTGTCATTAACATGAGCACCGTTTTCTCCC‑TCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGt                                                 <  1:5413969/93‑1 (MQ=37)

                                        tACCCTGTCATTAACATGAGCACCGTTTTCTCCC‑TCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGt                                                 >  1:171245/1‑93 (MQ=37)

                                          cccTGCGATTACCATGAGCACCTTTTGCTGCC‑TCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTc                                               <  1:4523398/93‑1 (MQ=21)

                                          acccgTCATTAACATGAGCACCGTTTTCTCCC‑TCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTc                                               >  2:1389941/5‑93 (MQ=37)

                                            cTGTCATTAACATGAGCACCGTTTTCTCCC‑TCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTccc                                             >  2:6628340/1‑93 (MQ=37)

                                             tGTCATTAACATGAGCACCGTTTTCTCCC‑TCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTcccc                                            <  2:5384047/93‑1 (MQ=37)

                                             tGTCATTAACATGAGCACCGTTTTCTCCC‑TCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTcccc                                            <  1:3341867/93‑1 (MQ=38)

                                              gTCATTAACATGAGCACCGTTTTCTCCC‑TCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCt                                           >  2:2667343/1‑93 (MQ=37)

                                               tCATTAACATGAGCACCGTTTTCTCCC‑TCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTc                                          >  1:6156105/1‑93 (MQ=25)

                                                 aTTAACATGAGCACCGTTTTCTCCC‑TCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCAc                                        >  1:5174186/1‑93 (MQ=25)

                                                       aTGAGCACCGTTTTCTCCC‑TCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTcccccccccccccc                                  >  1:7085161/1‑89 (MQ=25)

                                                          aGCACCGTTTTCTCCC‑TCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTTCCCccacccccacccc                               >  1:7140445/1‑92 (MQ=21)

                                                          aGCACCGTTTTCTCCC‑TCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCct                               >  2:1179429/1‑93 (MQ=21)

                                                           gCACCGTTTTCTCCC‑TCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCctc                              <  1:4769336/93‑1 (MQ=18)

                                                             aCCGTTTTCTCCC‑TCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCtctc                            <  2:2936656/93‑1 (MQ=18)

                                                               cGTTTTCTCCC‑TCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTccc                          <  1:3858208/93‑1 (MQ=17)

                                                                gTTTTCTCCC‑TCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTcccc                         <  1:461819/93‑1 (MQ=18)

                                                                gTTTTCTCCC‑TCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCCAACCCTCTcccc                         >  2:6296694/1‑93 (MQ=18)

                                                                  tttCTCCC‑TCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCCCCCCCCAACCCTCTccccca                       >  1:6322770/1‑91 (MQ=18)

                                                                    tctccc‑tctcccTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAAc                     <  1:5818288/89‑1 (MQ=18)

                                                                    tctccc‑tctcccTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAAc                     >  2:2563493/5‑93 (MQ=18)

                                                                      tccc‑tctcccTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACgg                   >  2:5063398/3‑93 (MQ=18)

                                                                      tccc‑tctcccTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACgg                   >  1:1217994/3‑93 (MQ=18)

                                                                      cccc‑tctcccTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACgg                   <  2:6965174/91‑1 (MQ=18)

                                                                      cccc‑tctcccTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACgg                   <  2:1778635/91‑1 (MQ=18)

                                                                       ccc‑tctcccTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACggg                  <  2:5881677/92‑1 (MQ=18)

                                                                       ccc‑tctcccTTCCAGGGAGGGGGTCGGGGTGAGGGGAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCCACCTAACCCTCTCCCCAAACggg                  >  1:4120557/2‑93 (MQ=18)

                                                                            ctccctTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGa              <  2:2235534/90‑1 (MQ=255)

                                                                             tccctTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCCCCCCCAACCCCCCCCCAAACCGGGCGAg             >  2:3511327/3‑93 (MQ=255)

                                                                             tccctTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCCCACCCCCTCCCCCAACCGGGCGAg             >  1:3525539/3‑93 (MQ=21)

                                                                             cccctTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAg             <  1:1559563/91‑1 (MQ=255)

                                                                               cctTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCCCCCTAACCCTCTCCCCAAACGGGGCGAggg           <  2:1467494/93‑1 (MQ=255)

                                                                               cctTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAggg           <  2:6162878/93‑1 (MQ=255)

                                                                               cctTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCCAAACCTCTCCCCAAAACGGGCGgggg           >  2:687787/1‑93 (MQ=18)

                                                                                ctTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAgggg          <  2:7308159/93‑1 (MQ=255)

                                                                                 ttCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTTCCCTCACCCCAACCCTCTCCCCAAACAGGGCGAggggg         >  2:2812139/1‑92 (MQ=21)

                                                                                 ttCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGGGGGGa         >  1:3803138/1‑93 (MQ=255)

                                                                                 ttCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGa         <  2:5177276/93‑1 (MQ=255)

                                                                                  tCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAgggggc        >  2:3776762/1‑91 (MQ=255)

                                                                                    cAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTg      <  1:5716892/93‑1 (MQ=255)

                                                                                       ggAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGAcc   <  1:2850315/93‑1 (MQ=255)

                                                                                       ggAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGAcc   <  2:4039220/93‑1 (MQ=255)

                                                                                        gaggGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCg  <  2:5637132/93‑1 (MQ=255)

                                                                                        gaggGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCg  >  1:7730170/1‑93 (MQ=255)

                                                                                        gaggGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCg  <  1:6523697/93‑1 (MQ=255)

                                                                                        gaggGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCg  <  2:1013206/93‑1 (MQ=255)

                                                                                        gaggGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCg  <  1:6798409/93‑1 (MQ=255)

AAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTCT‑CC‑TCT‑CCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCG  >  NC_000913/3237170‑3237347

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`