BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,295,175	T→C	Q202R (CAG→CGG)	yraQ ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,295,175	0	T	C	99.6%	879.3 / NA	279	Q202R (CAG→CGG)	yraQ	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (156/121); total (158/121)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 290 total aligned reads displayed.

ATCGTACTCCAGAAAAGCGTCCATAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCTGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGCCCGGCCACCAGACGAATCGCCGC  >  NC_000913/3295085‑3295263

aTCGTACTCCAGAAAAGCGTCCATAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGc                                                                                        >  1:2951534/1‑93 (MQ=255)

aTCGTACTCCAGAAAAGCGTCCATAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGc                                                                                        >  2:5273156/1‑93 (MQ=255)

 tCGTACTCCAGAAAAGCGTCCATAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCcgcg                                                                                       >  2:1036199/1‑93 (MQ=255)

 tCGTACTCCAGAAAAGCGTCCATAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTAGACCGGTGGCcgcg                                                                                       >  1:5412627/1‑93 (MQ=255)

  cGTACTCCAGAAAAGCGTCCATAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGt                                                                                      <  1:4053065/93‑1 (MQ=255)

   gTACTCCAGAAAAGCGTCCATAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGtt                                                                                     >  2:6670585/1‑93 (MQ=255)

   gTACTCCAGAAAAGCGTCCATAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGtt                                                                                     >  2:6450450/1‑93 (MQ=255)

   gTACTCCAGAAAAGCGTCCATAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGtt                                                                                     >  2:3014619/1‑93 (MQ=255)

    tACTCCAGAAAAGCGTCCATAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGttt                                                                                    >  1:2658085/1‑93 (MQ=255)

    tACTCCAGAAAAGCGTCCATAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGttt                                                                                    >  1:4004955/1‑93 (MQ=255)

    tACTCCAGAAAAGCGTCCATAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGttt                                                                                    >  1:3744706/1‑93 (MQ=255)

      cTCCAGAAAAGCGTCCATAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGc                                                                                  >  1:6926078/1‑93 (MQ=255)

      cTCCAGAAAAGCGTCCATAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGc                                                                                  >  1:2108864/1‑93 (MQ=255)

      cTCCAGAAAAGCGTCCATAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTAGACCGGTGCCCGCGTTTGc                                                                                  >  2:5142426/1‑93 (MQ=255)

       tCCAGAAAAGCGTCCATAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCg                                                                                 >  2:3062447/1‑93 (MQ=255)

       tCCAGAAAAGCGTCCATAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCg                                                                                 <  2:3893250/93‑1 (MQ=255)

       tCCAGAAAAGCGTCCATAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCg                                                                                 >  2:5622693/1‑93 (MQ=255)

       tCCAGAAAAGCGTCCATAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCg                                                                                 >  1:277493/1‑93 (MQ=255)

        ccAGAAAAGCGTCCATAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCgg                                                                                <  2:4174516/93‑1 (MQ=255)

          aGAAAAGCGTCCATAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGgtg                                                                              <  2:5010404/93‑1 (MQ=255)

          aGAAAAGCGTCCATAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGgtg                                                                              <  1:7340098/93‑1 (MQ=255)

          aGAAAAGCGTCCATAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGgtg                                                                              >  1:1360419/1‑93 (MQ=255)

            aaaaGCGTCCATAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGtt                                                                            >  1:5800294/1‑93 (MQ=255)

            aaaaGCGCCCATACCGCCCGGCCCAAGCGACTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGtt                                                                            <  2:61529/93‑1 (MQ=255)

             aaaGCGTCCATAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGttt                                                                           >  1:7396137/1‑93 (MQ=255)

             aaaGCGTCCATAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCCGTGCCCGCGTTTGCGGTGttt                                                                           >  2:6747731/1‑93 (MQ=255)

              aaGCGTCCATAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTc                                                                          <  2:7400998/93‑1 (MQ=255)

              aaGCGTCCATAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTc                                                                          >  1:5027812/1‑93 (MQ=255)

               aGCGTCCATAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCa                                                                         <  2:3524993/93‑1 (MQ=255)

               aGCGTCCATAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCa                                                                         <  1:4355741/93‑1 (MQ=255)

               aGCGTCCATAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCa                                                                         <  1:7912768/93‑1 (MQ=255)

               aGCGACCATAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTTCCCGCGTTTGCGGTGTTTCa                                                                         <  2:7891449/93‑1 (MQ=255)

                gCGTCCATAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCAc                                                                        >  1:4687866/1‑93 (MQ=255)

                 cGTCCATAGCTCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACg                                                                       <  1:7667621/93‑1 (MQ=255)

                  gTCCATAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGc                                                                      >  2:125751/1‑93 (MQ=255)

                  gTCCATAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGc                                                                      >  1:6052041/1‑93 (MQ=255)

                  gTCCATAGCGCCCTGACCCAGCGGCTAAAAAACCCGCCCTGTGTCTCCGGTATGCCAATCTTTACCGGTGCCCGCGTTTGCGGTGTTTCACGc                                                                      >  2:6011039/1‑93 (MQ=255)

                   tCCATAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGcc                                                                     >  2:3413149/1‑92 (MQ=255)

                   tCCATAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCa                                                                     >  2:1209600/1‑93 (MQ=255)

                   tCCATAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCa                                                                     >  2:1941201/1‑93 (MQ=255)

                    ccATAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCAc                                                                    >  2:1663057/1‑93 (MQ=255)

                      aTAGCGCACTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCAccc                                                                  >  2:7761204/1‑93 (MQ=255)

                       tAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCa                                                                 <  1:3930804/93‑1 (MQ=255)

                        aGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCAt                                                                >  2:2327151/1‑93 (MQ=255)

                         acgcCCTGCCCCAACCGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGGGGTGTTTCAGGCACCCAtt                                                               >  2:2013775/2‑93 (MQ=255)

                          cgcCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCAttt                                                              <  2:860696/93‑1 (MQ=255)

                           gcCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCAtttt                                                             >  1:6220013/1‑93 (MQ=255)

                            cccTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCAttttt                                                            >  1:4217692/1‑93 (MQ=255)

                             ccTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTg                                                           >  2:5932421/1‑93 (MQ=255)

                              cTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGc                                                          >  1:2569901/1‑93 (MQ=255)

                              cTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGc                                                          <  2:2609725/93‑1 (MQ=255)

                              cTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGc                                                          >  2:6917458/1‑93 (MQ=255)

                               cgCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCa                                                         <  1:5748356/92‑1 (MQ=255)

                                 ccccAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCAcc                                                       <  1:6292582/93‑1 (MQ=255)

                                 ccccAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCAcc                                                       >  1:1704104/1‑93 (MQ=255)

                                  cccAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCa                                                      >  2:27643/1‑93 (MQ=255)

                                  cccAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCa                                                      >  1:943242/1‑93 (MQ=255)

                                  cccAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCa                                                      >  2:1545414/1‑93 (MQ=255)

                                  cccAGCGCCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCa                                                      <  2:7097120/93‑1 (MQ=255)

                                   ccAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAg                                                     >  1:5947655/1‑93 (MQ=255)

                                    cAGCGGCTAAAAACCCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGc                                                    <  1:7126268/93‑1 (MQ=255)

                                    cAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGc                                                    >  1:5322107/1‑93 (MQ=255)

                                    cAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGc                                                    >  1:6170957/1‑93 (MQ=255)

                                      gCGTCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGt                                                  <  2:729541/93‑1 (MQ=255)

                                        ggCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCg                                                <  2:7610099/93‑1 (MQ=255)

                                           tAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCaa                                             >  2:4061061/1‑93 (MQ=255)

                                             aaaaaCCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATc                                           <  1:7845298/93‑1 (MQ=255)

                                              aaaaCCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCa                                          <  1:1201794/93‑1 (MQ=255)

                                              aaaaCCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCa                                          >  2:1582726/1‑93 (MQ=255)

                                               aaaCCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAg                                         <  1:5517421/93‑1 (MQ=255)

                                                aaCCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGc                                        <  1:1147600/93‑1 (MQ=255)

                                                aaCCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGc                                        >  1:6822671/1‑93 (MQ=255)

                                                aaCCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGc                                        >  2:4900329/1‑93 (MQ=255)

                                                    cGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCATTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAaca                                    >  2:2405069/1‑93 (MQ=255)

                                                     gCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAacac                                   <  1:4536044/93‑1 (MQ=255)

                                                     gCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAacac                                   <  2:5332912/93‑1 (MQ=255)

                                                        cTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCAt                                >  1:1982188/1‑93 (MQ=255)

                                                        cTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCAt                                >  1:2415053/1‑93 (MQ=255)

                                                         tgtgCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATc                               <  2:4493136/93‑1 (MQ=255)

                                                          gtgCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCa                              <  2:6140154/93‑1 (MQ=255)

                                                             cTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCa                           <  1:6506912/93‑1 (MQ=255)

                                                             cTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCa                           <  1:155904/93‑1 (MQ=255)

                                                                 cGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGccc                       <  2:707509/93‑1 (MQ=255)

                                                                  ggTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGCCCg                      <  1:4873936/93‑1 (MQ=255)

                                                                   gTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGCCCgg                     >  1:5596807/1‑93 (MQ=255)

                                                                   gTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGCCCgg                     >  2:4379867/1‑93 (MQ=255)

                                                                    tATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGCCCGGc                    <  1:3330607/93‑1 (MQ=255)

                                                                    tATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGCCCGGc                    <  1:7057976/93‑1 (MQ=255)

                                                                      tGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGCCCGGcca                  >  2:4601212/1‑93 (MQ=255)

                                                                           aTTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGCCCGGCCACTAGa             >  2:2445943/1‑93 (MQ=255)

                                                                           aTTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGCCCGGCCACCAGa             <  1:322350/93‑1 (MQ=255)

                                                                            tttCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGCACGGCCACCAGAc            >  2:3701688/1‑93 (MQ=255)

                                                                               cGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGCCCGGCCACCAGACGaa         <  1:1075304/93‑1 (MQ=255)

                                                                                gACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGCCCGGCCACCAGACGAAt        >  1:2306651/1‑93 (MQ=255)

                                                                                gACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGCCCGGCCACCAGACGAAt        <  2:7711120/93‑1 (MQ=255)

                                                                                 aCCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGCCCGGCCACCAGACGAATc       <  1:854603/93‑1 (MQ=255)

                                                                                     gTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGCCCGGCCACCAGACGAATcgccg   >  1:2258545/1‑93 (MQ=255)

                                                                                      tGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGCCCGGCCACCAGACGCATcgccgc  >  2:3187121/1‑93 (MQ=255)

                                                                                      tGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGCCCGGCCACCAGACGAATcgccgc  >  1:3600269/1‑93 (MQ=255)

                                                                                      tGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGCCCGGCCACCAGACGAATcgccgc  >  2:5492006/1‑93 (MQ=255)

ATCGTACTCCAGAAAAGCGTCCATAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCTGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGCCCGGCCACCAGACGAATCGCCGC  >  NC_000913/3295085‑3295263

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`