BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,298,707	T→C	T71A (ACC→GCC)	yhbT ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,298,707	0	T	C	99.5%	1215.9 / NA	387	T71A (ACC→GCC)	yhbT	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (177/207); minor base A (1/1); total (179/208)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 389 total aligned reads displayed.

CAATCATCAGCAGATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGTAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCATCATCCAGCGCCTGGCGGA  >  NC_000913/3298617‑3298796

cAATCATCAGCAGATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCaa                                                                                         >  2:1462546/1‑93 (MQ=255)

  atcatcAGCAGATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAAc                                                                                       >  2:342944/1‑93 (MQ=255)

  atcatcAGCAGATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAAc                                                                                       >  2:7799615/1‑93 (MQ=255)

   tcatcaGCAGATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAAcc                                                                                      >  2:5431143/1‑93 (MQ=255)

    catcaGCAGATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCa                                                                                     <  1:7643728/93‑1 (MQ=255)

    catcaGCAGATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCa                                                                                     <  1:2433126/93‑1 (MQ=255)

     atcaGCAGATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCAt                                                                                    <  1:7708863/93‑1 (MQ=255)

      tcaGCAGATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCAtt                                                                                   >  2:1779720/1‑93 (MQ=255)

      tcaGCAGATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCAtt                                                                                   >  1:17043/1‑93 (MQ=255)

      tcaGCAGATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCAtt                                                                                   <  1:3034552/93‑1 (MQ=255)

       cagcagATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTg                                                                                  <  1:7300422/93‑1 (MQ=255)

       cagcagATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTg                                                                                  >  2:1032388/1‑93 (MQ=255)

        agcagATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGc                                                                                 <  1:7142883/93‑1 (MQ=255)

         gcagATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCa                                                                                >  1:5397815/1‑93 (MQ=255)

          cagATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGGGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAg                                                                               <  1:5530631/93‑1 (MQ=255)

          cagATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAg                                                                               <  1:3555509/93‑1 (MQ=255)

          cagATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAATTGGCCATTCACCACCGAGGCAAACCATTGCAg                                                                               <  2:7604254/93‑1 (MQ=255)

           ataTCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAgg                                                                              <  1:7442977/91‑1 (MQ=255)

           agATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAgg                                                                              <  2:4970892/93‑1 (MQ=255)

           agATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAgg                                                                              <  2:6033869/93‑1 (MQ=255)

            gATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGt                                                                             >  1:1875928/1‑93 (MQ=255)

            gATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGt                                                                             <  1:5862658/93‑1 (MQ=255)

            gATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGt                                                                             >  2:162102/1‑93 (MQ=255)

              tCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCa                                                                           >  2:357808/1‑93 (MQ=255)

                gCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAat                                                                         <  2:7826985/93‑1 (MQ=255)

                  tGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAatat                                                                       >  1:3336969/1‑93 (MQ=255)

                  tGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAatat                                                                       <  2:778950/93‑1 (MQ=255)

                  tGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGAAAACCATTGCAGGTCAatat                                                                       >  1:6581119/1‑93 (MQ=255)

                   ggCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATc                                                                      >  1:2864844/1‑93 (MQ=255)

                   ggCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATc                                                                      >  2:5638500/1‑93 (MQ=255)

                    gCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCCCCACCGAGGCAAACCATTGCAGGTCAATATCa                                                                     <  2:7252514/93‑1 (MQ=255)

                    gCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGTAGGTCTATATCa                                                                     >  2:7025538/1‑93 (MQ=255)

                       tCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGc                                                                  >  1:5268116/1‑93 (MQ=255)

                       tCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGc                                                                  >  2:2186444/1‑93 (MQ=255)

                        cGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGca                                                                 >  2:3807209/1‑93 (MQ=255)

                          gCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGcaca                                                               <  1:6995354/93‑1 (MQ=255)

                            aCTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATg                                                             >  1:113300/1‑93 (MQ=255)

                            aCTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATg                                                             >  1:4241060/1‑93 (MQ=255)

                            aCTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATg                                                             >  2:622937/1‑93 (MQ=255)

                               aaaaCTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAAt                                                          <  1:3602755/93‑1 (MQ=255)

                               aaaaCTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAAt                                                          >  1:2668595/1‑93 (MQ=255)

                                aaaCTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATa                                                         <  1:2117589/93‑1 (MQ=255)

                                 aaCTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATAc                                                        <  1:2206989/93‑1 (MQ=255)

                                  aCTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACt                                                       <  1:5777817/93‑1 (MQ=255)

                                   cTCACATCAGCTTGCGCGTTCTGGCTAACAACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACtt                                                      <  1:6299774/93‑1 (MQ=255)

                                    tCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTa                                                     >  1:640431/1‑93 (MQ=255)

                                    tCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTa                                                     <  1:1469137/93‑1 (MQ=255)

                                     cacaTCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTaa                                                    <  2:864963/93‑1 (MQ=255)

                                     cacaTCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTaa                                                    >  1:4339410/1‑93 (MQ=255)

                                       caTCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAAcc                                                  >  2:3061991/1‑93 (MQ=255)

                                       caTCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAAcc                                                  >  2:2643942/1‑93 (MQ=255)

                                        aTCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCa                                                 <  2:4727053/93‑1 (MQ=255)

                                        aTCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCa                                                 >  1:4030011/1‑93 (MQ=255)

                                         tCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAg                                                <  1:6694774/93‑1 (MQ=255)

                                          cAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGc                                               <  1:4443851/93‑1 (MQ=255)

                                           aGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCg                                              <  2:5354071/93‑1 (MQ=255)

                                           aGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCg                                              >  2:4051699/1‑93 (MQ=255)

                                            gCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCgg                                             >  1:7081905/1‑93 (MQ=255)

                                             cTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGc                                            >  1:6171793/1‑93 (MQ=255)

                                              ttGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGcc                                           >  2:5263217/1‑93 (MQ=255)

                                                gcgcGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAGCCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCtt                                         >  1:2048589/1‑93 (MQ=255)

                                                gcgcGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCtt                                         <  2:2532703/93‑1 (MQ=255)

                                                gcgcGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCtt                                         >  2:1407774/1‑93 (MQ=255)

                                                  gcgTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCa                                       <  1:4518971/93‑1 (MQ=255)

                                                   cgTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCaa                                      <  2:5509597/93‑1 (MQ=255)

                                                    gTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAg                                     <  1:3821025/93‑1 (MQ=255)

                                                     ttCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGa                                    >  2:6689967/1‑93 (MQ=255)

                                                     ttCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGa                                    >  1:779296/1‑93 (MQ=255)

                                                       cTGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGaaa                                  <  2:3362449/93‑1 (MQ=255)

                                                        tGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAAc                                 <  2:7544909/93‑1 (MQ=255)

                                                        tGGCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAAc                                 >  1:1199246/1‑93 (MQ=255)

                                                         ggCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACt                                >  2:5725662/1‑93 (MQ=255)

                                                          gCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTc                               >  2:5058634/1‑93 (MQ=255)

                                                          gCTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTc                               <  2:6294008/93‑1 (MQ=255)

                                                           cTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTcc                              <  2:4503547/93‑1 (MQ=255)

                                                           cTAACGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTcc                              <  2:4840103/93‑1 (MQ=255)

                                                            tAACGACCAGTTGGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCa                             <  1:1012595/93‑1 (MQ=255)

                                                              aCGACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGc                           <  1:2319654/93‑1 (MQ=255)

                                                                gACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTc                         >  1:1046250/1‑93 (MQ=255)

                                                                gACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTc                         <  2:2511695/93‑1 (MQ=255)

                                                                gACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTc                         <  2:2317429/93‑1 (MQ=255)

                                                                gACCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTc                         >  2:4579610/1‑93 (MQ=255)

                                                                 aCCAGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCg                        >  1:2740331/1‑93 (MQ=255)

                                                                    aGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCca                     >  2:3951160/1‑93 (MQ=255)

                                                                    aGTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCca                     <  1:4908318/93‑1 (MQ=255)

                                                                     gTTTGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCATATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCcat                    <  2:6497470/93‑1 (MQ=255)

                                                                       ttGCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCcatca                  <  2:4243453/93‑1 (MQ=255)

                                                                         gCCATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCatcatc                >  2:3655381/1‑93 (MQ=255)

                                                                           cATTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCATCTCGCCATCATCCa              >  1:4702575/1‑93 (MQ=255)

                                                                            aTTCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCATCATCCAg             <  1:689073/93‑1 (MQ=255)

                                                                            aTTCACCACCGAGACAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCATCATCCAg             <  1:877264/93‑1 (MQ=255)

                                                                             ttCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCATCATCCAgc            <  2:2288839/93‑1 (MQ=255)

                                                                              tCACCACCGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCATCATCCAgcc           >  1:5573056/1‑92 (MQ=255)

                                                                                 ccaccGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCATCATCCAGCGCCt        <  1:6669806/93‑1 (MQ=255)

                                                                                 ccaccGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCATCATCCAGCGCCt        <  2:7326592/93‑1 (MQ=255)

                                                                                 ccaccGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCATCATCCAGCGCCt        >  2:3697927/1‑93 (MQ=255)

                                                                                   accGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCATCATCCAGCGCCTgg      >  2:6848041/1‑93 (MQ=255)

                                                                                   accGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCATCATCCAGCGCCTgg      <  1:5096338/93‑1 (MQ=255)

                                                                                   accGAGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCATCATCCAGCGCCTgg      >  1:1280018/1‑93 (MQ=255)

                                                                                       aGGCAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCATCATCCAGCGCCTGGCGGa  >  2:3283391/1‑93 (MQ=255)

CAATCATCAGCAGATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTAACGACCAGTTTGCCATTCACCACCGAGGTAAACCATTGCAGGTCAATATCACGCACATGAATACTTAACCAGCGGCCTTCAAGAAACTCCAGCTCGCCATCATCCAGCGCCTGGCGGA  >  NC_000913/3298617‑3298796

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`