Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,305,090 C→T D155N (GAC→AAC)  deaD ← inducible ATP‑independent RNA helicase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,305,0900CT99.7% 1061.0 / NA 303D155N (GAC→AAC) deaDinducible ATP‑independent RNA helicase
Reads supporting (aligned to +/- strand):  ref base C (0/1);  new base T (179/123);  total (179/124)
Fisher's exact test for biased strand distribution p-value = 4.09e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 313 total aligned reads displayed.

GATGAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTCCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGGCCGCCGTACAGAG  >  NC_000913/3305001‑3305179
                                                                                         |                                                                                         
 aTGAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTcagc                                                                                       >  2:1706012/1‑93 (MQ=255)
  tGAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTcagca                                                                                      <  1:6550266/93‑1 (MQ=255)
  tGAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTcagca                                                                                      >  1:2918556/1‑93 (MQ=255)
  tGAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACAGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTcagca                                                                                      <  2:4673608/93‑1 (MQ=255)
     aGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGAc                                                                                   >  1:7379066/1‑93 (MQ=255)
       cccATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACgg                                                                                 <  1:3916421/93‑1 (MQ=255)
        ccATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGc                                                                                >  1:1325374/1‑93 (MQ=255)
         cATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGcc                                                                               <  2:2249870/93‑1 (MQ=255)
          aTGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGccc                                                                              <  2:4940978/93‑1 (MQ=255)
          aTGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGccc                                                                              >  2:3432773/1‑93 (MQ=255)
          aTGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGccc                                                                              >  1:5418004/1‑93 (MQ=255)
           tGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCg                                                                             >  1:6231168/1‑93 (MQ=255)
           tGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCg                                                                             >  2:376605/1‑93 (MQ=255)
           tGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCg                                                                             >  1:4816483/1‑93 (MQ=255)
           tGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCg                                                                             >  2:1634947/1‑93 (MQ=255)
             cgcAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGa                                                                           <  2:4561744/93‑1 (MQ=255)
             cgcAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGa                                                                           <  1:5256107/93‑1 (MQ=255)
             cgcAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGa                                                                           >  2:1400290/1‑93 (MQ=255)
             cgcAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGa                                                                           <  2:7862816/93‑1 (MQ=255)
              gcagcaTTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAg                                                                          >  1:4241618/1‑93 (MQ=255)
              gcagcaTTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAg                                                                          >  1:6355410/1‑93 (MQ=255)
                agcaTTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTa                                                                        >  2:7629238/1‑93 (MQ=255)
                  caTTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTAcc                                                                      >  2:7361293/1‑93 (MQ=255)
                   aTTTCGTTACCTTCATCCAGAACCAGACTGCTCAGTTTAGAGAGGTCCAGAGAGACACGTTTCAGGTGGTTCAGAAGCCGGCCCAGACTACCg                                                                     >  2:2933047/1‑93 (MQ=255)
                   aTTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCg                                                                     >  2:6468767/1‑93 (MQ=255)
                   aTTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCg                                                                     <  1:1585924/93‑1 (MQ=255)
                    tttCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGa                                                                    >  1:1828266/1‑93 (MQ=255)
                    tttCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGa                                                                    <  1:5327759/93‑1 (MQ=255)
                    tttCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGa                                                                    <  2:4367992/93‑1 (MQ=255)
                    tttCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGCTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGa                                                                    >  1:219667/1‑93 (MQ=255)
                       cGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACaa                                                                 <  2:2520588/93‑1 (MQ=255)
                           aGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGAt                                                             <  2:3977821/93‑1 (MQ=255)
                           aGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGAt                                                             <  2:4221261/93‑1 (MQ=255)
                           aGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGCGGTTCAGCAGACGGCCCGGAGTACCGACAACGAt                                                             >  1:3080428/1‑93 (MQ=255)
                            gCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATc                                                            <  1:5830072/93‑1 (MQ=255)
                            gCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATc                                                            <  2:5345623/93‑1 (MQ=255)
                             cTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCt                                                           >  1:7635975/1‑93 (MQ=255)
                              ttCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCGGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTg                                                          <  2:5950952/93‑1 (MQ=255)
                              ttCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTg                                                          >  2:2608381/1‑93 (MQ=255)
                               tCATCCAGAGCCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGc                                                         <  2:5508679/93‑1 (MQ=255)
                               tCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGc                                                         >  1:1750152/1‑93 (MQ=255)
                               tCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGc                                                         <  2:630634/93‑1 (MQ=255)
                               tCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGc                                                         >  2:4069322/1‑93 (MQ=255)
                               tCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGc                                                         >  1:5540976/1‑93 (MQ=255)
                               tCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGc                                                         >  1:398450/1‑93 (MQ=255)
                                cATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCg                                                        <  1:5015683/93‑1 (MQ=255)
                                cATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGGGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCg                                                        >  1:5909975/1‑93 (MQ=255)
                                 acccAGAGCCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGCCAACGATCTGCgg                                                       <  2:315974/91‑1 (MQ=255)
                                  tCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGc                                                      >  1:2679947/1‑93 (MQ=255)
                                  tCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGc                                                      >  2:2353903/1‑93 (MQ=255)
                                   ccAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGcc                                                     <  2:5165813/93‑1 (MQ=255)
                                    cAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGccc                                                    <  2:5376530/93‑1 (MQ=255)
                                     aGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGCGTACCGACAACGATCTGCGGaccc                                                   >  1:7335353/1‑93 (MQ=255)
                                      gAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCt                                                  >  1:4351344/1‑93 (MQ=255)
                                      gAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCt                                                  >  1:6484294/1‑93 (MQ=255)
                                      gAACCAGACCGCTCAGTTTAGAGAGGGCCAGAGTGTCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGTccccg                                                  >  1:2363074/1‑92 (MQ=255)
                                       aaCCAGACCGCTCAGATTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGGCCCTg                                                 >  1:7006543/1‑93 (MQ=255)
                                        aCCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGa                                                >  1:4613464/1‑93 (MQ=255)
                                          cAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACg                                              >  2:4533979/1‑93 (MQ=255)
                                           aGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGc                                             >  2:1012890/1‑93 (MQ=255)
                                            gACCGTTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCa                                            >  2:5079322/1‑93 (MQ=255)
                                            gACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCa                                            <  2:5606105/93‑1 (MQ=255)
                                            gACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCa                                            <  2:2750230/93‑1 (MQ=255)
                                            gACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCa                                            <  1:376605/93‑1 (MQ=255)
                                              ccGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAgg                                          >  1:2080622/1‑93 (MQ=255)
                                               cGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAggg                                         >  2:7614778/1‑93 (MQ=255)
                                                gCTCAGTTTAGAGAGGTCCGGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGgc                                        >  2:1851101/1‑93 (MQ=255)
                                                   cAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGcgcg                                     >  2:199289/1‑93 (MQ=255)
                                                     gTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTa                                   >  1:3018871/1‑93 (MQ=255)
                                                     gTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTa                                   >  1:75853/1‑93 (MQ=255)
                                                      tttAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTaa                                  >  1:5662386/1‑93 (MQ=255)
                                                      tttAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTaa                                  <  2:7054663/93‑1 (MQ=255)
                                                          gagagGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGc                              >  1:6616114/1‑93 (MQ=255)
                                                            gagGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCAc                            <  2:3635089/93‑1 (MQ=255)
                                                              ggTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGt                          >  1:4033594/1‑93 (MQ=255)
                                                                tCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCa                        >  2:1445493/1‑93 (MQ=255)
                                                                tCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCa                        >  1:4410639/1‑93 (MQ=255)
                                                                tCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCa                        >  1:6980716/1‑93 (MQ=255)
                                                                gccAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCa                        <  2:5788321/92‑1 (MQ=255)
                                                                 ccAGAGTGCCACGTTTCAGGTGGTCCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCAt                       <  2:6658173/93‑1 (MQ=255)
                                                                  cAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATa                      >  2:6201176/1‑93 (MQ=255)
                                                                   agagTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATaa                     >  2:3514825/1‑93 (MQ=255)
                                                                   agagTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATaa                     <  1:7245481/93‑1 (MQ=255)
                                                                   agagTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATaa                     <  1:854769/93‑1 (MQ=255)
                                                                    gagTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAAc                    <  1:1226924/93‑1 (MQ=255)
                                                                    gagTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAAc                    >  2:5919885/1‑93 (MQ=255)
                                                                    gagTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAAc                    <  1:5583665/93‑1 (MQ=255)
                                                                    gagTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAAc                    <  2:3056020/93‑1 (MQ=255)
                                                                    gagTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAAc                    >  2:7033485/1‑93 (MQ=255)
                                                                      gggCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGc                  <  2:4823221/91‑1 (MQ=255)
                                                                      gTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGc                  <  2:5685622/93‑1 (MQ=255)
                                                                      gTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGc                  <  2:5259293/93‑1 (MQ=255)
                                                                        gCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTAATAACGCTg                >  1:3577306/1‑93 (MQ=255)
                                                                            cGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGgccg            <  1:2775505/93‑1 (MQ=255)
                                                                             gTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGgccgc           <  1:466401/93‑1 (MQ=255)
                                                                             gTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGgccgc           >  1:1102791/1‑93 (MQ=255)
                                                                              tttCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGgccgcc          >  2:7173684/1‑93 (MQ=255)
                                                                                 cAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGGCCGCCGTa       <  1:315466/93‑1 (MQ=255)
                                                                                   ggtggtTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGGCCGCCGTACa     >  2:2637132/1‑93 (MQ=255)
                                                                                    gtggtTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGGCCGCCGTACag    >  2:5440279/1‑93 (MQ=255)
                                                                                         |                                                                                         
GATGAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTCCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGGCCGCCGTACAGAG  >  NC_000913/3305001‑3305179

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: