BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,351,337	T→C	T117A (ACC→GCC)	yhcC ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,351,337	0	T	C	99.7%	993.9 / NA	326	T117A (ACC→GCC)	yhcC	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (162/163); minor base A (1/0); total (163/163)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 344 total aligned reads displayed.

GTAGCCCCAGCTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGTACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCTGGTAT  >  NC_000913/3351247‑3351426

   gCCCCAGCTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCca                                                                                      >  2:177558/1‑93 (MQ=255)

   gCCCCAGCTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCca                                                                                      <  1:1907425/93‑1 (MQ=255)

    ccccAGCTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCcac                                                                                     <  2:3928928/93‑1 (MQ=255)

      ccAGCTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCcacac                                                                                   >  1:7260588/1‑93 (MQ=255)

        aGCCCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCcacacac                                                                                 >  2:4243405/1‑93 (MQ=255)

         gCTCCAGCCACACTTCGTATCCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCcacacaca                                                                                <  2:4173410/93‑1 (MQ=255)

         gCTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCcacacaca                                                                                >  2:694362/1‑93 (MQ=255)

         gCTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCcacacaca                                                                                >  1:4351393/1‑93 (MQ=255)

         gCTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCcacacaca                                                                                >  2:49434/1‑93 (MQ=255)

            ccAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAAc                                                                             >  2:2909827/1‑93 (MQ=255)

            ccAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAAc                                                                             >  2:4387811/1‑93 (MQ=255)

             cAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAAcc                                                                            <  2:2439441/93‑1 (MQ=255)

              aGCCACACTCCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCg                                                                           >  2:5238927/1‑93 (MQ=255)

               gCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGa                                                                          >  1:7867341/1‑93 (MQ=255)

               gCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGa                                                                          <  2:4293833/93‑1 (MQ=255)

               gCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGa                                                                          >  1:4637891/1‑93 (MQ=255)

                ccACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGAc                                                                         >  2:3725589/1‑93 (MQ=255)

                ccACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGAc                                                                         >  1:5189753/1‑93 (MQ=255)

                 cacaCTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACa                                                                        <  1:1664515/93‑1 (MQ=255)

                 cacaCTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACa                                                                        >  1:4024531/1‑93 (MQ=255)

                   cacTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAat                                                                      >  2:4642552/1‑93 (MQ=255)

                    ccTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAata                                                                     <  1:5672077/92‑1 (MQ=255)

                    acTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAata                                                                     <  2:3220913/93‑1 (MQ=255)

                    acTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAata                                                                     <  2:2411169/93‑1 (MQ=255)

                     cTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACCCAAACCGACAatat                                                                    >  1:2549476/1‑93 (MQ=255)

                     cTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAatat                                                                    <  2:5757780/93‑1 (MQ=255)

                      ttCGTACCCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATAtt                                                                   <  2:1302037/93‑1 (MQ=255)

                      ttCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATAtt                                                                   >  1:3775713/1‑93 (MQ=255)

                      ttCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATAtt                                                                   >  1:5696172/1‑93 (MQ=255)

                      ttCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATAtt                                                                   <  2:7646391/93‑1 (MQ=255)

                      ttCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATAtt                                                                   >  2:2887938/1‑93 (MQ=255)

                       tCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTg                                                                  <  2:1001292/93‑1 (MQ=255)

                       tCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTg                                                                  <  1:805023/93‑1 (MQ=255)

                        cGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTgg                                                                 <  1:1025422/93‑1 (MQ=255)

                        cGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTgg                                                                 >  2:617514/1‑93 (MQ=255)

                         gTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGc                                                                >  1:1518841/1‑93 (MQ=255)

                           aaCCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCt                                                              >  2:5416230/1‑93 (MQ=255)

                            aCCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTg                                                             >  2:2168973/1‑93 (MQ=255)

                              ccTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGc                                                           <  2:6562878/93‑1 (MQ=255)

                               cTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATGGGCCTGGCt                                                          >  1:5880320/1‑93 (MQ=255)

                                tGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTc                                                         <  1:4490704/93‑1 (MQ=255)

                                tGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTc                                                         <  1:2537765/93‑1 (MQ=255)

                                tGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTc                                                         <  1:5362222/93‑1 (MQ=255)

                                 ggTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCa                                                        <  2:7138680/93‑1 (MQ=255)

                                  gTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCAc                                                       <  1:1312331/93‑1 (MQ=255)

                                   tCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCAcc                                                      <  2:3398158/93‑1 (MQ=255)

                                     cTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGc                                                    <  1:3046034/93‑1 (MQ=255)

                                      ttATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGcc                                                   >  1:7216970/1‑93 (MQ=255)

                                      ttATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGcc                                                   >  2:3815536/1‑93 (MQ=255)

                                      ttATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGcc                                                   >  1:6095724/1‑93 (MQ=255)

                                       tataTTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCct                                                  >  2:904782/1‑93 (MQ=255)

                                        atatTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCctg                                                 >  2:6664333/1‑93 (MQ=255)

                                         tatTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCctgc                                                >  1:3336409/1‑93 (MQ=255)

                                         tatTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCctgc                                                >  1:7452221/1‑93 (MQ=255)

                                         tatTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCctgc                                                >  1:6506145/1‑93 (MQ=255)

                                          atTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCctgct                                               >  1:3943519/1‑93 (MQ=255)

                                           ttCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCctgctg                                              >  1:2332648/1‑93 (MQ=255)

                                           ttCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCctgctg                                              >  2:7555192/1‑93 (MQ=255)

                                           ttCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCctgctg                                              >  2:2208371/1‑93 (MQ=255)

                                           ttCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCctgctg                                              >  1:3833774/1‑93 (MQ=255)

                                            tCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGa                                             <  1:5800736/93‑1 (MQ=255)

                                             cGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGAt                                            >  1:2423375/1‑93 (MQ=255)

                                               cAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATAc                                          >  1:6956962/1‑93 (MQ=255)

                                                 aaGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACAt                                        >  2:433081/1‑93 (MQ=255)

                                                  aGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATa                                       <  1:670829/93‑1 (MQ=255)

                                                   gCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAg                                      >  2:3280112/1‑93 (MQ=255)

                                                     aGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGaa                                    <  2:4780132/93‑1 (MQ=255)

                                                        tCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACgc                                 >  2:7453853/1‑93 (MQ=255)

                                                         ccAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACgca                                <  2:1149127/93‑1 (MQ=255)

                                                          cAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACgcag                               >  2:6015418/1‑93 (MQ=255)

                                                          cAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACgcag                               <  2:1723208/93‑1 (MQ=255)

                                                           aGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACgcagc                              >  1:7149955/1‑93 (MQ=255)

                                                            gCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACgcagcc                             >  1:4159344/1‑92 (MQ=255)

                                                            gCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACgcagca                             >  2:7142783/1‑93 (MQ=255)

                                                               ccGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCt                          <  1:7646479/93‑1 (MQ=255)

                                                                   aTCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAAc                      >  2:5668867/1‑93 (MQ=255)

                                                                   aTCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAAc                      >  1:1960881/1‑93 (MQ=255)

                                                                    tCCGGCACGCAGTCCGGGCGGGCATCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACt                     >  2:7365774/1‑93 (MQ=255)

                                                                    tCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACt                     >  1:4913467/1‑93 (MQ=255)

                                                                    tCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACt                     >  1:6308854/1‑93 (MQ=255)

                                                                    tCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACt                     >  2:184522/1‑93 (MQ=255)

                                                                    tCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACt                     <  2:800945/93‑1 (MQ=255)

                                                                       ggCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTcc                  <  2:1609123/93‑1 (MQ=255)

                                                                       ggCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTcc                  >  2:1375869/1‑93 (MQ=255)

                                                                        gCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCg                 >  1:1760194/1‑93 (MQ=255)

                                                                         cACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGc                >  1:4738672/1‑93 (MQ=255)

                                                                          aCGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGGCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCa               >  1:7007443/1‑93 (MQ=255)

                                                                            gCAGTGCGGGCGGGCACCCACACACAAGCCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCaaa             <  1:3618800/93‑1 (MQ=255)

                                                                            gCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCaaa             <  2:4459700/93‑1 (MQ=255)

                                                                             cAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAg            <  1:625049/93‑1 (MQ=255)

                                                                               gTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGt          <  2:1998132/93‑1 (MQ=255)

                                                                               ctCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGt          <  2:5547291/92‑1 (MQ=255)

                                                                                   gggcgggcACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCTg      <  1:1178470/93‑1 (MQ=255)

                                                                                   gggcgggcACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCTg      >  1:2168576/1‑93 (MQ=255)

                                                                                    ggcgggCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCTgg     <  2:2663706/93‑1 (MQ=255)

                                                                                    ggcgggCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCTgg     <  1:1375869/93‑1 (MQ=255)

                                                                                     gcgggCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCTGGt    <  1:2813595/93‑1 (MQ=255)

                                                                                      cgggCACCCACACACAACCCGACAATATTGGCCTTGCTCACCGCCTGCTGATACATAGACCGCAGCACCTGAACTTCCGCAAAGGTGCTGGta   <  2:5986099/93‑1 (MQ=255)

                                                                                      cgggCACCCACACACAACCCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCTCCTGAACTTCCGCAAAGGTGCTGGta   <  2:3617825/93‑1 (MQ=255)

                                                                                      cgggCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCTGGta   <  2:5915050/93‑1 (MQ=255)

GTAGCCCCAGCTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGTACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCTGGTAT  >  NC_000913/3351247‑3351426

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`