BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,359,299	T→C	G163G (GGT→GGC)	gltF →	GltF

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,359,299	0	T	C	99.7%	977.1 / NA	311	G163G (GGT→GGC)	gltF	GltF
Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (166/144); minor base A (0/1); total (166/145)
Fisher's exact test for biased strand distribution p-value = 4.66e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 324 total aligned reads displayed.

AGGTTCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGTGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTGCTCGCT  >  NC_000913/3359209‑3359388

  gTTCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGaaa                                                                                       >  1:567356/1‑93 (MQ=255)

  gTTCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGaaa                                                                                       <  2:1738142/93‑1 (MQ=255)

   ttCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAAt                                                                                      >  1:628791/1‑93 (MQ=255)

    tCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAAtt                                                                                     <  1:4723952/93‑1 (MQ=255)

     cTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTc                                                                                    <  1:2035806/93‑1 (MQ=255)

      tGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTcc                                                                                   <  2:4895372/93‑1 (MQ=255)

       gcgcCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGTGGACGATACAGGCGAAATTCCt                                                                                  <  2:2756828/93‑1 (MQ=255)

       gcgcCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCt                                                                                  <  2:5288621/93‑1 (MQ=255)

       gcgcCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCt                                                                                  <  1:874450/93‑1 (MQ=255)

        cgcCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTg                                                                                 <  2:2366289/93‑1 (MQ=255)

         gcCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGt                                                                                <  1:885147/93‑1 (MQ=255)

         gcCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGt                                                                                <  1:6172600/93‑1 (MQ=255)

         gcCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGt                                                                                <  1:3370015/93‑1 (MQ=255)

         gcCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGt                                                                                <  2:7434737/93‑1 (MQ=255)

         gcCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGt                                                                                <  1:2429029/93‑1 (MQ=255)

            tAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGa                                                                             >  1:7821229/1‑93 (MQ=255)

              aTGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGAcc                                                                           <  1:3266195/93‑1 (MQ=255)

              aTGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGAcc                                                                           >  2:6213432/1‑93 (MQ=255)

               tGGACAAAAAATTGGCGCTGCATCCATTTGTATTGACAGGGCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAAATTCTGTCGACCt                                                                          >  2:4803683/1‑93 (MQ=255)

                 gACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGa                                                                        >  2:1338488/1‑93 (MQ=255)

                  gcAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGAt                                                                       <  1:4531868/92‑1 (MQ=255)

                  aCAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGAt                                                                       >  1:5044666/1‑93 (MQ=255)

                   cAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGAtt                                                                      <  1:6436208/93‑1 (MQ=255)

                   cAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGAtt                                                                      <  2:3796896/93‑1 (MQ=255)

                    aaaaaaTTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTc                                                                     >  2:5877501/1‑93 (MQ=255)

                       aaaTTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCaaa                                                                  <  1:1815331/93‑1 (MQ=255)

                        aaTTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAAc                                                                 >  2:6411335/1‑93 (MQ=255)

                        aaTTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAAc                                                                 <  2:7271511/93‑1 (MQ=255)

                         aTTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAAcg                                                                >  1:306992/1‑92 (MQ=255)

                         aTTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACt                                                                >  1:6787604/1‑93 (MQ=255)

                         aTTGGCGCGGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACt                                                                <  2:3709001/93‑1 (MQ=255)

                          ttGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTg                                                               >  1:1100492/1‑93 (MQ=255)

                          ttGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTg                                                               >  2:2107004/1‑93 (MQ=255)

                               gcTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCAc                                                          >  2:3588443/1‑93 (MQ=255)

                                cTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACt                                                         <  2:3276536/93‑1 (MQ=255)

                                  gCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTgg                                                       <  2:7838063/93‑1 (MQ=255)

                                   cATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGt                                                      >  1:7127558/1‑93 (MQ=255)

                                    aTCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTc                                                     <  1:1247816/93‑1 (MQ=255)

                                      ccATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTcag                                                   >  1:4801796/1‑93 (MQ=255)

                                       cATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTcagc                                                  >  1:2709503/1‑93 (MQ=255)

                                       cATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTcagc                                                  <  2:1077436/93‑1 (MQ=255)

                                       cATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTcagc                                                  <  2:683544/93‑1 (MQ=255)

                                        aTTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTcagca                                                 <  1:6015859/93‑1 (MQ=255)

                                        aTTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTcagca                                                 <  1:5318956/93‑1 (MQ=255)

                                        aTTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTcagca                                                 >  1:6689848/1‑93 (MQ=255)

                                        aTTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTcagca                                                 <  1:3566322/93‑1 (MQ=255)

                                        aTTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTcagca                                                 <  2:6261539/93‑1 (MQ=255)

                                          tGGTATTGACAGGTCTAATTGTGGAATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCagcagc                                               <  2:7517475/93‑1 (MQ=255)

                                          tGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTcagcaga                                               >  1:4276684/1‑92 (MQ=255)

                                          tGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCagcagc                                               >  1:2338191/1‑93 (MQ=255)

                                            gTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGa                                             >  1:5528087/1‑93 (MQ=255)

                                            gTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGa                                             <  1:5091020/93‑1 (MQ=255)

                                            gTATTGACAGGCCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTAGACCTGATTCAAAATGACCACTGGTCAGCAGCGa                                             >  2:4204133/1‑93 (MQ=255)

                                             tATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGAc                                            >  1:3671494/1‑93 (MQ=255)

                                             tATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGAc                                            <  1:7502716/93‑1 (MQ=255)

                                              aTTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGAcc                                           >  2:862572/1‑93 (MQ=255)

                                               ttGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGcccc                                          >  2:2040160/1‑93 (MQ=255)

                                               ttGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGAccc                                          >  1:1929902/1‑93 (MQ=255)

                                               ttGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGAccc                                          >  2:3515552/1‑93 (MQ=255)

                                               ttGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGAccc                                          <  2:3350730/93‑1 (MQ=255)

                                                 gACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGAccccc                                        >  1:7087536/1‑93 (MQ=255)

                                                   cAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGCAATTTCTGTCGACCTGGTTCAAACTGACCACTGGTCAGCAGCGaccacccc                                      >  2:5855781/1‑91 (MQ=255)

                                                    agttCTAATGGTGTGATTCATGCGGCGGACGATACAGGCGAAATTCCTGCCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCcaca                                     <  2:5751131/90‑1 (MQ=255)

                                                    aGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCcaca                                     <  2:712623/93‑1 (MQ=255)

                                                     ggTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACAt                                    >  1:2853280/1‑93 (MQ=255)

                                                     ggTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTAAAACTGACCACTGGTCAGAAGCGACCCCCACAt                                    >  1:2258562/1‑93 (MQ=255)

                                                       tCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATgg                                  >  1:212525/1‑93 (MQ=255)

                                                       tCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATgg                                  >  1:3501338/1‑93 (MQ=255)

                                                         tAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGaa                                <  2:1479585/93‑1 (MQ=255)

                                                         tAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGaa                                >  2:5525285/1‑93 (MQ=255)

                                                          aaTGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGaaa                               <  2:6597504/93‑1 (MQ=255)

                                                          aaTGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGaaa                               <  2:1042629/93‑1 (MQ=255)

                                                              tggggATTTACTCGGCGGACGATACAGGCGAAATTCCTGTCGACCCGATGTAAACTGACCACTGGTCAGCAGCGACCTCCTCATGGTAAGCCt                           >  2:7041664/3‑93 (MQ=255)

                                                               tggGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTc                          <  2:3017168/93‑1 (MQ=255)

                                                                  gATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATc                       <  2:6660673/93‑1 (MQ=255)

                                                                  gATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATc                       <  1:1517405/93‑1 (MQ=255)

                                                                   aTTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCt                      <  1:853992/93‑1 (MQ=255)

                                                                    ttCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTa                     >  2:2293338/1‑93 (MQ=255)

                                                                    ttCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTa                     >  2:4526859/1‑93 (MQ=255)

                                                                     tCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTaa                    <  2:3324404/93‑1 (MQ=255)

                                                                     tCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTaa                    <  1:5390019/93‑1 (MQ=255)

                                                                     tCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTaa                    <  2:5922922/93‑1 (MQ=255)

                                                                      cACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAAt                   <  1:1335587/93‑1 (MQ=255)

                                                                        cgcgGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATgg                 >  2:427234/1‑93 (MQ=255)

                                                                        cgcgGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATgg                 >  2:6090379/1‑93 (MQ=255)

                                                                            gcggACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCa             >  2:562244/1‑93 (MQ=255)

                                                                             gggACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCAt            <  1:5158790/92‑1 (MQ=255)

                                                                              ggACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCAtt           >  1:2561567/1‑93 (MQ=255)

                                                                              ggACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCAtt           >  2:2610207/1‑93 (MQ=255)

                                                                              ggACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGAACCCCACATGGAAAGCCTCATCTAATGGCGCAtt           >  1:7650799/1‑93 (MQ=255)

                                                                               gACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTc          <  1:7192993/93‑1 (MQ=255)

                                                                               gACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTc          >  2:2657348/1‑93 (MQ=255)

                                                                                aCGATACAGGCGAAATTCCTGTCGACATGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTCt         <  2:3541208/93‑1 (MQ=255)

                                                                                aCGAGACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTCt         <  2:4432783/93‑1 (MQ=255)

                                                                                   aTACAGGCGAAATTCCTGTGGCCCTGATTCAAGCTGACCACTGGTCAGCACCGCCCCCCACATGGAAAGCGTCATATAATCGCGCATTCTGcg      >  1:4082305/1‑92 (MQ=255)

                                                                                   aTACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTGCt      <  2:6449959/93‑1 (MQ=255)

                                                                                   aTACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTGCt      >  1:4438096/1‑93 (MQ=255)

                                                                                   aTACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTGCt      >  1:7352606/1‑93 (MQ=255)

                                                                                     aCAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTGCTCg    >  1:3122997/1‑93 (MQ=255)

                                                                                       aGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTGCTCGCt  <  2:7214902/93‑1 (MQ=255)

AGGTTCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGTGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTGCTCGCT  >  NC_000913/3359209‑3359388

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`