| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,556,990 | G→A | R364H (CGC→CAC) | rtcR → | putative 2‑component regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,556,990 | 0 | G | A | 99.7% | 1124.4 / ‑5.6 | 317 | R364H (CGC→CAC) | rtcR | putative 2‑component regulator |
| Reads supporting (aligned to +/- strand): ref base G (0/1); new base A (159/156); total (160/157) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.97e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.88e-01 | |||||||||||
Only 100 of 356 total aligned reads displayed.
TGCGCCAGCTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCGCCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTAACACCGAAGCGC > NC_000913/3556900‑3557079 | tGCGCCAGCTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTAcgccagcacc < 1:7464154/93‑1 (MQ=255)tGCGCCAGCTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCCCTGGACCTTCACCCTGCCGGGTCTAcgccagcacc < 1:567956/93‑1 (MQ=255) gcgcCAGCTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTAcgccagcacca < 1:6783630/93‑1 (MQ=255) cgcCAGCTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTAcgccagcaccag < 2:7074598/93‑1 (MQ=255) cgcCAGCTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTAcgccagcaccag < 2:6493634/93‑1 (MQ=255) cgcCAGCTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTAcgccagcaccag < 1:5578025/93‑1 (MQ=255) ccAGCTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGa < 1:3384991/93‑1 (MQ=255) cAGCTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGaa < 2:5455304/93‑1 (MQ=255) cAGCTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGaa < 2:1946240/93‑1 (MQ=255) aGCTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAg < 2:7000123/93‑1 (MQ=255) aGCTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAg > 2:318035/1‑93 (MQ=255) gCTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGa > 2:147823/1‑93 (MQ=255) gCTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGa < 1:3525718/93‑1 (MQ=255) cTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGat > 1:5761998/1‑93 (MQ=255) tGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGata > 2:3347247/1‑93 (MQ=255) ggTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGatat < 2:2664208/93‑1 (MQ=255) tGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTga < 2:5230388/93‑1 (MQ=255) tGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTga < 1:6249960/93‑1 (MQ=255) ccGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTgaac > 1:1842573/1‑93 (MQ=255) cGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTgaacc < 1:2090172/93‑1 (MQ=255) gAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTgaaccg > 2:4845461/1‑93 (MQ=255) aaGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTgaaccga < 1:6968147/93‑1 (MQ=255) ggCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTgaaccgaac > 2:3271120/1‑93 (MQ=255) ggCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTgaaccgaac > 1:2430321/1‑93 (MQ=255) ggCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTgaaccgaac > 1:782603/1‑93 (MQ=255) gCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTgaaccgaacc < 1:6303556/93‑1 (MQ=255) gCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTgaaccgaacc > 1:6134125/1‑93 (MQ=255) cAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCt < 2:2409171/93‑1 (MQ=255) aaaTTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTg < 2:6306122/93‑1 (MQ=255) aaaTTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTg < 1:1175187/93‑1 (MQ=255) aaTTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTgg > 2:474872/1‑93 (MQ=255) aTTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGa < 2:85656/93‑1 (MQ=255) tttCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGTACCAGGAAGATATTGAACCGAACCTGGAt > 2:3623491/1‑93 (MQ=255) tCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTa > 1:1507527/1‑93 (MQ=255) ggtgAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTAt > 2:7137373/4‑93 (MQ=255) cgcgAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTAt < 1:7643915/93‑1 (MQ=255) gcgAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATg < 1:5430541/93‑1 (MQ=255) gcgAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATg > 2:1516637/1‑93 (MQ=255) gAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGaa > 2:4065897/1‑93 (MQ=255) gAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGaa > 2:5867240/1‑93 (MQ=255) aaGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAg > 2:6892421/1‑93 (MQ=255) aaGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAg > 2:2097832/1‑93 (MQ=255) aaGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAg < 1:5869628/93‑1 (MQ=255) aaGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAg < 2:512156/93‑1 (MQ=255) aaGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAg < 2:68571/93‑1 (MQ=255) aGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGt > 1:2567622/1‑93 (MQ=255) gATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTg > 1:45118/1‑93 (MQ=255) gATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTg > 2:30618/1‑93 (MQ=255) aTCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTgg > 2:1877782/1‑93 (MQ=255) tCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGa < 1:6867054/93‑1 (MQ=255) tGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAgc < 2:7430771/93‑1 (MQ=255) tGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAgc > 1:7658713/1‑93 (MQ=255) gTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAgcg > 1:1328350/1‑93 (MQ=255) gTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAgcg < 2:2311356/93‑1 (MQ=255) cgcgcgGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCa < 2:3412485/93‑1 (MQ=255) gcgcgGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCAc < 2:7377194/93‑1 (MQ=255) gcgcgGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCAc > 1:4711534/1‑93 (MQ=255) gcgGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGc > 1:5654651/1‑93 (MQ=255) gATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCctc > 1:6632381/1‑93 (MQ=255) aTCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCctca > 1:7348007/1‑93 (MQ=255) tCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCctcac > 1:5209676/1‑93 (MQ=255) aaTCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCctcactc > 2:5387220/1‑93 (MQ=255) aTCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCctcactca < 2:6690018/93‑1 (MQ=255) aTCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCctcactca < 1:7137374/93‑1 (MQ=255) tctcTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCtcactcac > 2:6655466/1‑93 (MQ=255) tctcTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCtcactcac > 1:2010094/1‑93 (MQ=255) tctcTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCtcactcac < 1:287579/93‑1 (MQ=255) tctcTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCtcactcac < 2:4263143/93‑1 (MQ=255) tctcTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCtcactcac < 2:7774078/93‑1 (MQ=255) ctctGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTcactcact < 1:2716529/93‑1 (MQ=255) ctctGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTcactcact < 2:1377760/93‑1 (MQ=255) tGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGc < 2:5918107/93‑1 (MQ=255) ggACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCg > 1:4266605/1‑93 (MQ=255) gACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTcgcgc > 2:2859531/1‑92 (MQ=255) ccTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACa > 1:926340/1‑93 (MQ=255) cTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGCTTATGAAGTGGAGCGCCAGGCCCCACTGACTGGCGagac > 2:6571699/1‑90 (MQ=255) cTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAg < 2:1072075/93‑1 (MQ=255) cTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAg > 1:1771497/1‑93 (MQ=255) tCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAgcg > 2:5743157/1‑93 (MQ=255) cACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAgcgt < 1:6398945/93‑1 (MQ=255) cccTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGTGCGCCACGCCTCACTCACTGGCGACAgcgtgc > 1:4933828/1‑93 (MQ=255) cccTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAgcgtgc < 2:6212079/93‑1 (MQ=255) cTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAgcgtgcgt > 1:7696912/1‑93 (MQ=255) cTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAgcgtgcgt > 2:1682365/1‑93 (MQ=255) tGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGtt > 1:3673087/1‑93 (MQ=255) tGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGACACGCCTCACTCACTGGCGACAGCGTGCGtt > 1:2811021/1‑93 (MQ=255) gggTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCCCGCCTCACTCACTGGCGACAGCGTGCGTTTTaa > 1:1026617/1‑93 (MQ=255) gggTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTaa < 1:3896919/93‑1 (MQ=255) ggTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTAac < 1:7030927/93‑1 (MQ=255) ggTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTAac < 1:5116916/93‑1 (MQ=255) gTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTAaca < 1:1533532/93‑1 (MQ=255) tCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTAacac > 2:455946/1‑93 (MQ=255) tCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGGTTTAacac > 1:2937880/1‑93 (MQ=255) cTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTAACAcc < 2:3948996/93‑1 (MQ=255) gccagcaccagGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTAACACCGAAg < 1:1422859/93‑1 (MQ=255) gccagcaccagGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTAACACCGAAg < 2:7869920/93‑1 (MQ=255) ccagcaccagGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTAACACCGAAgc < 2:6160306/93‑1 (MQ=255) ccagcaccagGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTAACACCGAAgc > 2:173322/1‑93 (MQ=255) ccagcaccagGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTAACACCGAAgc < 2:3754117/93‑1 (MQ=255) agcaccagGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTAACACCGAAgcgc < 1:2144746/93‑1 (MQ=255) | TGCGCCAGCTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCGCCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTAACACCGAAGCGC > NC_000913/3556900‑3557079 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |