Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,574,513 T→C intergenic (+1216/+184) yhgN → / ← gntK hypothetical protein/gluconokinase 2

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,574,5130TC99.7% 1079.1 / ‑5.4 351intergenic (+1216/+184)yhgN/gntKhypothetical protein/gluconokinase 2
Reads supporting (aligned to +/- strand):  ref base T (0/1);  new base C (192/158);  total (192/159)
Fisher's exact test for biased strand distribution p-value = 4.53e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.69e-01

Only 100 of 362 total aligned reads displayed.

TGACGGCAATCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGTGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACCACCATTAAAG  >  NC_000913/3574423‑3574602
                                                                                          |                                                                                         
tGACGGCAATCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGgcgc                                                                                         >  1:7067952/1‑93 (MQ=255)
 gACGGCAATCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGcc                                                                                        >  1:1632607/1‑93 (MQ=255)
  aCGGCAATCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCt                                                                                       <  1:4181229/93‑1 (MQ=255)
   cGGCAATCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTc                                                                                      <  1:2588464/93‑1 (MQ=255)
     gCAATCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTccc                                                                                    <  2:3954158/93‑1 (MQ=255)
      cAATCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCa                                                                                   <  1:1426709/93‑1 (MQ=255)
       aaTCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCAt                                                                                  <  1:3603328/93‑1 (MQ=255)
        aTCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATc                                                                                 >  2:2239995/1‑93 (MQ=255)
         tCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATcc                                                                                >  2:1683915/1‑93 (MQ=255)
           tGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCt                                                                              >  2:723204/1‑93 (MQ=255)
           tGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCt                                                                              >  2:6320245/1‑93 (MQ=255)
            gATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAGCCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCtt                                                                             >  1:6168558/1‑93 (MQ=255)
             aTCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCttt                                                                            >  1:898830/1‑93 (MQ=255)
             aTCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCttt                                                                            >  1:301217/1‑93 (MQ=255)
              tCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCtttt                                                                           <  2:4222079/93‑1 (MQ=255)
                gACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTc                                                                         >  1:6826171/1‑93 (MQ=255)
                    gcgcCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCAtc                                                                     <  1:3278464/93‑1 (MQ=255)
                      gcCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCAtcgt                                                                   <  1:5782506/93‑1 (MQ=255)
                       ccGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCAtcgtc                                                                  >  1:2531075/1‑93 (MQ=255)
                         ggTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGc                                                                <  1:3398529/93‑1 (MQ=255)
                          gTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCt                                                               >  1:7747158/1‑93 (MQ=255)
                          gTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCt                                                               >  2:7563951/1‑93 (MQ=255)
                            ttCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCTTCCCTTTTTCCATCGTCGCTGc                                                             <  2:7918023/93‑1 (MQ=255)
                            ttCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGc                                                             >  2:1930594/1‑93 (MQ=255)
                            ttCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGc                                                             >  1:4017223/1‑93 (MQ=255)
                            ttCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGc                                                             <  2:1618497/93‑1 (MQ=255)
                             tCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCg                                                            <  1:5353932/93‑1 (MQ=255)
                               aTGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGAt                                                          >  1:7592404/1‑93 (MQ=255)
                                tGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGAtt                                                         >  2:6493060/1‑93 (MQ=255)
                                tGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGAtt                                                         >  1:6031378/1‑93 (MQ=255)
                                 gTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGAttt                                                        <  1:1699791/93‑1 (MQ=255)
                                 gTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGAttt                                                        >  1:6703565/1‑93 (MQ=255)
                                 gTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGAttt                                                        <  2:7304200/93‑1 (MQ=255)
                                 gTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGAttt                                                        >  1:6515091/1‑93 (MQ=255)
                                  tAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGAtttt                                                       <  2:7417285/93‑1 (MQ=255)
                                  tAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGAtttt                                                       <  1:7314969/93‑1 (MQ=255)
                                  tAAGATCTTGCCAAACATAGCGCCCAGGCCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGAtttt                                                       <  2:1812566/93‑1 (MQ=255)
                                   aaGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGTGATTTTa                                                      <  1:2196587/93‑1 (MQ=255)
                                   aaGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTa                                                      <  2:6434641/93‑1 (MQ=255)
                                   aaGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTa                                                      <  2:5974550/93‑1 (MQ=255)
                                    aGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTAt                                                     >  1:6588499/1‑93 (MQ=255)
                                      aTCTTGCCAATCATAGCTCCCAGGGCGCCAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCg                                                   <  2:1252996/93‑1 (MQ=255)
                                       tCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGa                                                  >  1:6417534/1‑93 (MQ=255)
                                       tCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGa                                                  >  1:5561244/1‑93 (MQ=255)
                                       tCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGa                                                  <  2:5857683/93‑1 (MQ=255)
                                        cTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAg                                                 >  2:1030402/1‑93 (MQ=255)
                                         ttGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGc                                                >  2:3031458/1‑93 (MQ=255)
                                           gCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCgg                                              >  2:4107327/1‑93 (MQ=255)
                                             cAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCa                                            >  1:7161549/1‑93 (MQ=255)
                                             cAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCa                                            >  1:6280530/1‑93 (MQ=255)
                                             cAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCa                                            >  2:4867243/1‑93 (MQ=255)
                                              aaaCATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCAt                                           <  2:89767/93‑1 (MQ=255)
                                              aaaCATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCAt                                           <  2:2014573/93‑1 (MQ=255)
                                              aaaCATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCAt                                           <  2:4240462/93‑1 (MQ=255)
                                              aaaCATAGCCCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCAt                                           >  2:5241706/1‑93 (MQ=255)
                                                aCATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATAc                                         >  1:4703942/1‑93 (MQ=255)
                                                 cATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATAcc                                        <  2:6753065/93‑1 (MQ=255)
                                                  aTAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCa                                       >  2:6878601/1‑93 (MQ=255)
                                                  aTAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCAATCGTCGCTGCGATTTTATCGAGCGGCATACCa                                       <  1:1348954/93‑1 (MQ=255)
                                                   tAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAg                                      >  1:5985602/1‑93 (MQ=255)
                                                    aGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGa                                     >  1:4317349/1‑93 (MQ=255)
                                                         ccAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGaaaaaa                                >  2:3220991/1‑93 (MQ=255)
                                                         ccAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGaaaaaa                                >  2:3760078/1‑93 (MQ=255)
                                                         ccAGCGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGaaaaaa                                >  2:5046828/1‑93 (MQ=255)
                                                          cAGGGCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAg                               >  1:52004/1‑93 (MQ=255)
                                                            ggggGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGc                             <  2:6040726/93‑1 (MQ=255)
                                                            gggCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGc                             >  2:3284802/1‑93 (MQ=255)
                                                            gggCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGc                             >  1:3739895/1‑93 (MQ=255)
                                                            gggCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGc                             <  2:2090862/93‑1 (MQ=255)
                                                             ggCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGcc                            <  1:7657561/93‑1 (MQ=255)
                                                              gCGACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCa                           <  1:7222192/93‑1 (MQ=255)
                                                                gACAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGc                         >  1:3673853/1‑93 (MQ=255)
                                                                 aCAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGcc                        >  2:2763807/1‑93 (MQ=255)
                                                                 aCAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGcc                        >  2:6999347/1‑93 (MQ=255)
                                                                 aCAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGcc                        >  1:1539833/1‑93 (MQ=255)
                                                                  cAACCACCGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGccc                       <  1:1822995/93‑1 (MQ=255)
                                                                    accaccGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGccccc                     >  2:7697163/1‑93 (MQ=255)
                                                                    accaccGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGccccc                     >  1:2758433/1‑93 (MQ=255)
                                                                     ccaccGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCa                    >  1:2338235/1‑93 (MQ=255)
                                                                     ccaccGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCa                    <  1:2413680/93‑1 (MQ=255)
                                                                       cccGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATg                  <  2:4754450/92‑1 (MQ=255)
                                                                       cccGCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATg                  <  2:6177837/92‑1 (MQ=255)
                                                                          gCCAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGac               >  2:1194777/1‑93 (MQ=255)
                                                                           ccAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGaca              <  1:1497502/93‑1 (MQ=255)
                                                                           ccAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGaca              >  1:1023640/1‑93 (MQ=255)
                                                                           ccAGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGaca              >  2:144760/1‑93 (MQ=255)
                                                                             aGGAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGAcacc            >  1:5498937/1‑93 (MQ=255)
                                                                              ggAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGAcacca           >  2:4510574/1‑93 (MQ=255)
                                                                              ggAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGAcacca           >  1:4981244/1‑93 (MQ=255)
                                                                               gAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGAcaccac          <  2:5791707/93‑1 (MQ=255)
                                                                               gAAGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGAcaccac          <  2:5332828/93‑1 (MQ=255)
                                                                                aaGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACaccacc         >  2:2568349/1‑93 (MQ=255)
                                                                                 aGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGTGGCATACCAGAAAAAAGGACAGCCCCCATGGACAccaaca        >  2:1724869/1‑93 (MQ=255)
                                                                                 aGCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACAccacca        <  2:4057468/93‑1 (MQ=255)
                                                                                  gCCGAGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACCACCAt       >  2:2679436/1‑93 (MQ=255)
                                                                                      aGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACCACCATTaaa   <  2:471133/93‑1 (MQ=255)
                                                                                      aGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACCACCATTaaa   <  2:7168064/93‑1 (MQ=255)
                                                                                      aGGGCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACCACCATTaaa   <  2:3520693/93‑1 (MQ=255)
                                                                                       gggCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACCACCATTAAAg  >  2:555587/1‑93 (MQ=255)
                                                                                       gggCGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACCACCATTAAAg  >  1:4594530/1‑93 (MQ=255)
                                                                                          |                                                                                         
TGACGGCAATCTGATCGACTGCGCCGGTTTCATGTAAGATCTTGCCAAACATAGCTCCCAGGGCGACAACCACCGCCAGGAAGCCGAGGGTGCCTCCCATCCCTTTTTCCATCGTCGCTGCGATTTTATCGAGCGGCATACCAGAAAAAAGGCCAGCCCCCATGGACACCACCATTAAAG  >  NC_000913/3574423‑3574602

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: